RNA–Protein interactions for RNA: ENST00000552839.6

TMEM116-218, Transcript of transmembrane protein 116, humanhuman

TSL 4

Gene TMEM116, Length 511 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM116-218ENST00000552839 MPLKIPQ8TAP9 179 aa5.69□□□□□ -1.5
TMEM116-218ENST00000552839 H1FX-AS1Q4G0G2 97 aa5.65□□□□□ -1.5
TMEM116-218ENST00000552839 MT2AP02795 61 aa5.64□□□□□ -1.51
TMEM116-218ENST00000552839 ANAPC13Q9BS18 74 aa5.64□□□□□ -1.51
TMEM116-218ENST00000552839 C20orf197Q8N268 126 aa5.63□□□□□ -1.51
TMEM116-218ENST00000552839 KLKP1Q107X0 134 aa5.62□□□□□ -1.51
TMEM116-218ENST00000552839 SNURFQ9Y675 71 aa5.62□□□□□ -1.51
TMEM116-218ENST00000552839 KRTAP9-3Q9BYQ3 159 aa5.61□□□□□ -1.51
TMEM116-218ENST00000552839 MT1FP04733 61 aa5.6□□□□□ -1.51
TMEM116-218ENST00000552839 COX7CP15954 63 aa5.6□□□□□ -1.51
TMEM116-218ENST00000552839 S4R3F8 94 aa5.59□□□□□ -1.51
TMEM116-218ENST00000552839 A8MUN3 132 aa5.58□□□□□ -1.52
TMEM116-218ENST00000552839 MACF1Q9UPN3 7388 aaKnown RBP5.56□□□□□ -1.52
TMEM116-218ENST00000552839 SYNE2Q8WXH0 6885 aaKnown RBP5.56□□□□□ -1.52
TMEM116-218ENST00000552839 KRTAP10-10P60014 251 aa5.55□□□□□ -1.52
TMEM116-218ENST00000552839 KRTAP19-6Q3LI70 58 aa5.52□□□□□ -1.53
TMEM116-218ENST00000552839 NDUFC1O43677 76 aa5.51□□□□□ -1.53
TMEM116-218ENST00000552839 KRTAP3-1Q9BYR8 98 aa5.51□□□□□ -1.53
TMEM116-218ENST00000552839 DMAC1Q96GE9 116 aa5.5□□□□□ -1.53
TMEM116-218ENST00000552839 ACYP2P14621 99 aa5.48□□□□□ -1.53
TMEM116-218ENST00000552839 KRTAP6-3Q3LI67 103 aa5.48□□□□□ -1.53
TMEM116-218ENST00000552839 CSAG1Q6PB30 78 aa5.48□□□□□ -1.53
TMEM116-218ENST00000552839 LCA10Q71F78 164 aa5.48□□□□□ -1.53
TMEM116-218ENST00000552839 CHKB-CPT1BH3BT56 60 aa5.47□□□□□ -1.53
TMEM116-218ENST00000552839 SPANXA2-OT1Q8N9U9 137 aa5.47□□□□□ -1.53
TMEM116-218ENST00000552839 CCDC179H3BU77 68 aa5.44□□□□□ -1.54
TMEM116-218ENST00000552839 SPTSSBQ8NFR3 76 aa5.42□□□□□ -1.54
TMEM116-218ENST00000552839 H7BZZ5 65 aa5.4□□□□□ -1.54
TMEM116-218ENST00000552839 CYSTM1Q9H1C7 97 aa5.37□□□□□ -1.55
TMEM116-218ENST00000552839 ATP5EP56381 51 aaPredicted RBP5.35□□□□□ -1.55
TMEM116-218ENST00000552839 COA5Q86WW8 74 aa5.33□□□□□ -1.56
TMEM116-218ENST00000552839 TMEM258P61165 79 aa5.31□□□□□ -1.56
TMEM116-218ENST00000552839 ADM2Q7Z4H4 148 aa5.27□□□□□ -1.57
TMEM116-218ENST00000552839 H0YAA0 97 aa5.25□□□□□ -1.57
TMEM116-218ENST00000552839 PCP4P48539 62 aa5.25□□□□□ -1.57
TMEM116-218ENST00000552839 KRTAP20-1Q3LI63 56 aa5.25□□□□□ -1.57
TMEM116-218ENST00000552839 MUC12Q9UKN1 5478 aa5.24□□□□□ -1.57
TMEM116-218ENST00000552839 NEBP20929 6669 aa5.24□□□□□ -1.57
TMEM116-218ENST00000552839 SEC61GP60059 68 aa5.22□□□□□ -1.57
TMEM116-218ENST00000552839 CRIPTQ9P021 101 aa5.19□□□□□ -1.58
TMEM116-218ENST00000552839 SERP1Q9Y6X1 66 aa5.18□□□□□ -1.58
TMEM116-218ENST00000552839 R4GN34 69 aa5.16□□□□□ -1.58
TMEM116-218ENST00000552839 P0C880 135 aa5.13□□□□□ -1.59
TMEM116-218ENST00000552839 A6NN06 94 aa5.12□□□□□ -1.59
TMEM116-218ENST00000552839 M0QZ58 72 aa5.12□□□□□ -1.59
TMEM116-218ENST00000552839 A0A1B0GU69 56 aa5.1□□□□□ -1.59
TMEM116-218ENST00000552839 PRR15LQ9BU68 103 aa5.1□□□□□ -1.59
TMEM116-218ENST00000552839 KRTAP5-9P26371 169 aa5.08□□□□□ -1.6
TMEM116-218ENST00000552839 LINC01554Q52M75 96 aa5.06□□□□□ -1.6
TMEM116-218ENST00000552839 SPRR2GQ9BYE4 73 aa5.06□□□□□ -1.6
TMEM116-218ENST00000552839 MT1BP07438 61 aa5.05□□□□□ -1.6
TMEM116-218ENST00000552839 Q5VV11 94 aa5.05□□□□□ -1.6
TMEM116-218ENST00000552839 MDN1Q9NU22 5596 aa5.02□□□□□ -1.61
TMEM116-218ENST00000552839 KRTAP2-3P0C7H8 128 aa5.01□□□□□ -1.61
TMEM116-218ENST00000552839 KRTAP2-4Q9BYR9 128 aa5.01□□□□□ -1.61
TMEM116-218ENST00000552839 KMT2DO14686 5537 aa5.01□□□□□ -1.61
TMEM116-218ENST00000552839 A0A1B0GU33 70 aa5□□□□□ -1.61
TMEM116-218ENST00000552839 KRTAP10-5P60370 271 aa5□□□□□ -1.61
TMEM116-218ENST00000552839 V9GYY9 64 aa5□□□□□ -1.61
TMEM116-218ENST00000552839 LINC01558Q9Y6Z2 57 aa4.99□□□□□ -1.61
TMEM116-218ENST00000552839 PLAC4Q8WY50 150 aa4.98□□□□□ -1.61
TMEM116-218ENST00000552839 KRTAP19-8Q3LI54 63 aa4.97□□□□□ -1.61
TMEM116-218ENST00000552839 SMIM26A0A096LP01 95 aa4.96□□□□□ -1.62
TMEM116-218ENST00000552839 A0A0D9SG42 100 aa4.92□□□□□ -1.62
TMEM116-218ENST00000552839 RPS28P62857 69 aaKnown RBP4.91□□□□□ -1.62
TMEM116-218ENST00000552839 SPATA8Q6RVD6 105 aa4.91□□□□□ -1.62
TMEM116-218ENST00000552839 PSPHP1O15172 72 aa4.89□□□□□ -1.63
TMEM116-218ENST00000552839 Q1T7F1 81 aa4.89□□□□□ -1.63
TMEM116-218ENST00000552839 KRTAP13-4Q3LI77 160 aa4.89□□□□□ -1.63
TMEM116-218ENST00000552839 UQCR11O14957 56 aa4.87□□□□□ -1.63
TMEM116-218ENST00000552839 SPRR2EP22531 72 aa4.86□□□□□ -1.63
TMEM116-218ENST00000552839 SPRR2BP35325 72 aa4.86□□□□□ -1.63
TMEM116-218ENST00000552839 SPRR2AP35326 72 aa4.86□□□□□ -1.63
TMEM116-218ENST00000552839 PRO2289Q9P1D8 64 aa4.85□□□□□ -1.63
TMEM116-218ENST00000552839 SPINT4Q6UDR6 99 aa4.84□□□□□ -1.63
TMEM116-218ENST00000552839 SPRR2FQ96RM1 72 aa4.84□□□□□ -1.63
TMEM116-218ENST00000552839 CAMK2N1Q7Z7J9 78 aa4.83□□□□□ -1.64
TMEM116-218ENST00000552839 KRTAP2-2Q9BYT5 123 aa4.83□□□□□ -1.64
TMEM116-218ENST00000552839 KRTAP2-1Q9BYU5 128 aa4.83□□□□□ -1.64
TMEM116-218ENST00000552839 A6NED7 52 aa4.79□□□□□ -1.64
TMEM116-218ENST00000552839 A8MU10 97 aa4.79□□□□□ -1.64
TMEM116-218ENST00000552839 MIR22HGQ0VDD5 57 aa4.79□□□□□ -1.64
TMEM116-218ENST00000552839 LCE1AQ5T7P2 110 aa4.75□□□□□ -1.65
TMEM116-218ENST00000552839 K7ERS5 55 aa4.74□□□□□ -1.65
TMEM116-218ENST00000552839 LOC100996750A0A140TA64 210 aa4.72□□□□□ -1.65
TMEM116-218ENST00000552839 KRTAP12-1P59990 96 aa4.72□□□□□ -1.65
TMEM116-218ENST00000552839 KRTAP4-6Q9BYQ5 205 aa4.72□□□□□ -1.65
TMEM116-218ENST00000552839 KRTAP12-2P59991 146 aa4.7□□□□□ -1.66
TMEM116-218ENST00000552839 KRTAP8-1Q8IUC2 63 aa4.7□□□□□ -1.66
TMEM116-218ENST00000552839 SPRR2DP22532 72 aa4.69□□□□□ -1.66
TMEM116-218ENST00000552839 MT1XP80297 61 aa4.69□□□□□ -1.66
TMEM116-218ENST00000552839 LCE3BQ5TA77 95 aa4.61□□□□□ -1.67
TMEM116-218ENST00000552839 CDC42SE1Q9NRR8 79 aa4.59□□□□□ -1.67
TMEM116-218ENST00000552839 KRTAP4-8A0A0G2JLE6 195 aa4.58□□□□□ -1.68
TMEM116-218ENST00000552839 KRTAP4-8Q9BYQ9 185 aa4.58□□□□□ -1.68
TMEM116-218ENST00000552839 KRTAP10-7P60409 375 aaPredicted RBP4.5□□□□□ -1.69
TMEM116-218ENST00000552839 BRK1Q8WUW1 75 aa4.5□□□□□ -1.69
TMEM116-218ENST00000552839 TNP1P09430 55 aa4.49□□□□□ -1.69
TMEM116-218ENST00000552839 KRTAP10-12P60413 245 aa4.47□□□□□ -1.69
TMEM116-218ENST00000552839 C10orf95Q9H7T3 257 aa4.46□□□□□ -1.7
Retrieved 100 of 20,778 RNA–protein pairs in 1085.2 ms