RNA–Protein interactions for RNA: ENST00000552829.2

SUPT16H-202, Transcript of SPT16 homolog, facilitates chromatin remodeling subunit, humanhuman

TSL 2

Gene SUPT16H, Length 669 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SUPT16H-202ENST00000552829 TMEM254Q8TBM7 123 aa5.73□□□□□ -1.49
SUPT16H-202ENST00000552829 ATP11AUNQ6ZP68 121 aa5.72□□□□□ -1.49
SUPT16H-202ENST00000552829 MRPL34Q9BQ48 92 aaKnown RBP5.72□□□□□ -1.49
SUPT16H-202ENST00000552829 NDUFS5O43920 106 aa5.71□□□□□ -1.5
SUPT16H-202ENST00000552829 NEBP20929 6669 aa5.7□□□□□ -1.5
SUPT16H-202ENST00000552829 TRAV7A0A075B6U4 112 aa5.69□□□□□ -1.5
SUPT16H-202ENST00000552829 OCR1Q9BZK8 76 aa5.69□□□□□ -1.5
SUPT16H-202ENST00000552829 KRTAP16-1A8MUX0 517 aa5.68□□□□□ -1.5
SUPT16H-202ENST00000552829 SERP2Q8N6R1 65 aa5.68□□□□□ -1.5
SUPT16H-202ENST00000552829 CCDC179H3BU77 68 aa5.67□□□□□ -1.5
SUPT16H-202ENST00000552829 SMIM20Q8N5G0 67 aa5.67□□□□□ -1.5
SUPT16H-202ENST00000552829 COX7CP15954 63 aa5.66□□□□□ -1.5
SUPT16H-202ENST00000552829 KRTAP20-1Q3LI63 56 aa5.64□□□□□ -1.51
SUPT16H-202ENST00000552829 UQCRQO14949 82 aa5.63□□□□□ -1.51
SUPT16H-202ENST00000552829 H0Y9P7 68 aa5.62□□□□□ -1.51
SUPT16H-202ENST00000552829 C20orf197Q8N268 126 aa5.62□□□□□ -1.51
SUPT16H-202ENST00000552829 Q8N9P0 234 aaPredicted RBP5.61□□□□□ -1.51
SUPT16H-202ENST00000552829 C20orf166-AS1Q96NR2 134 aa5.61□□□□□ -1.51
SUPT16H-202ENST00000552829 MUC12Q9UKN1 5478 aa5.61□□□□□ -1.51
SUPT16H-202ENST00000552829 SNURFQ9Y675 71 aa5.61□□□□□ -1.51
SUPT16H-202ENST00000552829 TP53AIP1Q9HCN2 124 aa5.6□□□□□ -1.51
SUPT16H-202ENST00000552829 TRAV22A0A0B4J277 110 aa5.58□□□□□ -1.52
SUPT16H-202ENST00000552829 A8MUU9 505 aa5.58□□□□□ -1.52
SUPT16H-202ENST00000552829 Q5W150 140 aa5.58□□□□□ -1.52
SUPT16H-202ENST00000552829 MP68P56378 58 aa5.57□□□□□ -1.52
SUPT16H-202ENST00000552829 LINC00208Q96KT6 92 aa5.57□□□□□ -1.52
SUPT16H-202ENST00000552829 C5orf47Q569G3 176 aa5.56□□□□□ -1.52
SUPT16H-202ENST00000552829 CYSTM1Q9H1C7 97 aa5.56□□□□□ -1.52
SUPT16H-202ENST00000552829 IGKV2-30P06310 120 aa5.55□□□□□ -1.52
SUPT16H-202ENST00000552829 FAM236DA0A1B0GTK5 79 aa5.54□□□□□ -1.52
SUPT16H-202ENST00000552829 FAM236CP0DP71 79 aa5.54□□□□□ -1.52
SUPT16H-202ENST00000552829 ZCCHC13Q8WW36 166 aaKnown RBP5.54□□□□□ -1.52
SUPT16H-202ENST00000552829 C1orf64Q8NEQ6 169 aa5.53□□□□□ -1.52
SUPT16H-202ENST00000552829 HRES1P13985 223 aa5.52□□□□□ -1.53
SUPT16H-202ENST00000552829 H3BPC8 53 aa5.51□□□□□ -1.53
SUPT16H-202ENST00000552829 KLKP1Q107X0 134 aa5.51□□□□□ -1.53
SUPT16H-202ENST00000552829 IGKV2D-30A0A075B6S6 120 aa5.5□□□□□ -1.53
SUPT16H-202ENST00000552829 LOC101927531A0A1B0GV80 90 aa5.48□□□□□ -1.53
SUPT16H-202ENST00000552829 RBM12B-AS1Q9P1G2 102 aa5.48□□□□□ -1.53
SUPT16H-202ENST00000552829 PRAC1Q96KF2 57 aa5.47□□□□□ -1.53
SUPT16H-202ENST00000552829 H7BZZ5 65 aa5.46□□□□□ -1.54
SUPT16H-202ENST00000552829 C7orf65Q6ZTY9 151 aa5.44□□□□□ -1.54
SUPT16H-202ENST00000552829 CYP4F30PQ9H0H9 118 aa5.44□□□□□ -1.54
SUPT16H-202ENST00000552829 NDUFC1O43677 76 aa5.43□□□□□ -1.54
SUPT16H-202ENST00000552829 MDN1Q9NU22 5596 aa5.41□□□□□ -1.54
SUPT16H-202ENST00000552829 KRTAP5-9P26371 169 aa5.41□□□□□ -1.54
SUPT16H-202ENST00000552829 TMEM258P61165 79 aa5.41□□□□□ -1.54
SUPT16H-202ENST00000552829 SPINK7P58062 85 aa5.39□□□□□ -1.55
SUPT16H-202ENST00000552829 KMT2DO14686 5537 aa5.38□□□□□ -1.55
SUPT16H-202ENST00000552829 KRTAP2-3P0C7H8 128 aa5.38□□□□□ -1.55
SUPT16H-202ENST00000552829 KRTAP2-4Q9BYR9 128 aa5.38□□□□□ -1.55
SUPT16H-202ENST00000552829 SPANXA2-OT1Q8N9U9 137 aa5.34□□□□□ -1.55
SUPT16H-202ENST00000552829 ATP5EP56381 51 aaPredicted RBP5.33□□□□□ -1.56
SUPT16H-202ENST00000552829 C4orf26Q17RF5 130 aa5.32□□□□□ -1.56
SUPT16H-202ENST00000552829 A6NN06 94 aa5.3□□□□□ -1.56
SUPT16H-202ENST00000552829 SEC61GP60059 68 aa5.29□□□□□ -1.56
SUPT16H-202ENST00000552829 DMAC1Q96GE9 116 aa5.26□□□□□ -1.57
SUPT16H-202ENST00000552829 COA5Q86WW8 74 aa5.24□□□□□ -1.57
SUPT16H-202ENST00000552829 SERP1Q9Y6X1 66 aa5.24□□□□□ -1.57
SUPT16H-202ENST00000552829 MT1BP07438 61 aa5.23□□□□□ -1.57
SUPT16H-202ENST00000552829 ACYP2P14621 99 aa5.22□□□□□ -1.57
SUPT16H-202ENST00000552829 KRTAP10-5P60370 271 aa5.21□□□□□ -1.58
SUPT16H-202ENST00000552829 A8MUN3 132 aa5.19□□□□□ -1.58
SUPT16H-202ENST00000552829 CHKB-CPT1BH3BT56 60 aa5.19□□□□□ -1.58
SUPT16H-202ENST00000552829 KRTAP2-2Q9BYT5 123 aa5.17□□□□□ -1.58
SUPT16H-202ENST00000552829 KRTAP2-1Q9BYU5 128 aa5.17□□□□□ -1.58
SUPT16H-202ENST00000552829 RPS28P62857 69 aaKnown RBP5.14□□□□□ -1.59
SUPT16H-202ENST00000552829 KRTAP19-8Q3LI54 63 aa5.14□□□□□ -1.59
SUPT16H-202ENST00000552829 H1FX-AS1Q4G0G2 97 aa5.13□□□□□ -1.59
SUPT16H-202ENST00000552829 Q5VV11 94 aa5.13□□□□□ -1.59
SUPT16H-202ENST00000552829 S4R3F8 94 aa5.13□□□□□ -1.59
SUPT16H-202ENST00000552829 SPRR2EP22531 72 aa5.1□□□□□ -1.59
SUPT16H-202ENST00000552829 SPRR2BP35325 72 aa5.1□□□□□ -1.59
SUPT16H-202ENST00000552829 SPRR2AP35326 72 aa5.1□□□□□ -1.59
SUPT16H-202ENST00000552829 SMIM26A0A096LP01 95 aa5.09□□□□□ -1.59
SUPT16H-202ENST00000552829 LCA10Q71F78 164 aa5.09□□□□□ -1.59
SUPT16H-202ENST00000552829 SPRR2GQ9BYE4 73 aa5.08□□□□□ -1.6
SUPT16H-202ENST00000552829 SPRR2FQ96RM1 72 aa5.06□□□□□ -1.6
SUPT16H-202ENST00000552829 GPR98Q8WXG9 6306 aa5.06□□□□□ -1.6
SUPT16H-202ENST00000552829 SPTSSBQ8NFR3 76 aa5.05□□□□□ -1.6
SUPT16H-202ENST00000552829 NDUFAF8A1L188 74 aa5.02□□□□□ -1.61
SUPT16H-202ENST00000552829 LCE1AQ5T7P2 110 aa5.02□□□□□ -1.61
SUPT16H-202ENST00000552829 PRR15LQ9BU68 103 aa4.99□□□□□ -1.61
SUPT16H-202ENST00000552829 LINC01558Q9Y6Z2 57 aa4.99□□□□□ -1.61
SUPT16H-202ENST00000552829 Q1T7F1 81 aa4.98□□□□□ -1.61
SUPT16H-202ENST00000552829 PSPHP1O15172 72 aa4.97□□□□□ -1.61
SUPT16H-202ENST00000552829 V9GYY9 64 aa4.97□□□□□ -1.61
SUPT16H-202ENST00000552829 CSAG1Q6PB30 78 aa4.96□□□□□ -1.62
SUPT16H-202ENST00000552829 A0A1B0GU69 56 aa4.94□□□□□ -1.62
SUPT16H-202ENST00000552829 SPRR2DP22532 72 aa4.94□□□□□ -1.62
SUPT16H-202ENST00000552829 ADM2Q7Z4H4 148 aa4.89□□□□□ -1.63
SUPT16H-202ENST00000552829 KRTAP8-1Q8IUC2 63 aa4.86□□□□□ -1.63
SUPT16H-202ENST00000552829 P0C880 135 aa4.85□□□□□ -1.63
SUPT16H-202ENST00000552829 H0YAA0 97 aa4.81□□□□□ -1.64
SUPT16H-202ENST00000552829 A6NED7 52 aa4.8□□□□□ -1.64
SUPT16H-202ENST00000552829 A0A1B0GU33 70 aa4.79□□□□□ -1.64
SUPT16H-202ENST00000552829 MT1XP80297 61 aa4.78□□□□□ -1.64
SUPT16H-202ENST00000552829 KRTAP12-2P59991 146 aa4.76□□□□□ -1.65
SUPT16H-202ENST00000552829 UQCR11O14957 56 aa4.75□□□□□ -1.65
SUPT16H-202ENST00000552829 KRTAP13-4Q3LI77 160 aa4.75□□□□□ -1.65
Retrieved 100 of 20,778 RNA–protein pairs in 67.3 ms