RNA–Protein interactions for RNA: ENST00000552645.5

LETMD1-234, Transcript of LETM1 domain containing 1, humanhuman

TSL 1 (best)

Gene LETMD1, Length 1,623 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LETMD1-234ENST00000552645 KRTAP13-3Q3SY46 172 aa5.52□□□□□ -1.53
LETMD1-234ENST00000552645 MRPL34Q9BQ48 92 aaKnown RBP5.52□□□□□ -1.53
LETMD1-234ENST00000552645 C9orf92A6NGG3 77 aa5.51□□□□□ -1.53
LETMD1-234ENST00000552645 ADM2Q7Z4H4 148 aa5.51□□□□□ -1.53
LETMD1-234ENST00000552645 DMAC1Q96GE9 116 aa5.49□□□□□ -1.53
LETMD1-234ENST00000552645 A0A1B0GU69 56 aa5.48□□□□□ -1.53
LETMD1-234ENST00000552645 UQCR11O14957 56 aa5.46□□□□□ -1.54
LETMD1-234ENST00000552645 MIR22HGQ0VDD5 57 aa5.45□□□□□ -1.54
LETMD1-234ENST00000552645 XP32Q5T750 250 aa5.45□□□□□ -1.54
LETMD1-234ENST00000552645 RNF213Q63HN8 5207 aa5.44□□□□□ -1.54
LETMD1-234ENST00000552645 IGHV6-1A0A0B4J1U7 121 aa5.44□□□□□ -1.54
LETMD1-234ENST00000552645 CSAG1Q6PB30 78 aa5.41□□□□□ -1.54
LETMD1-234ENST00000552645 SEC61BP60468 96 aaKnown RBP5.4□□□□□ -1.55
LETMD1-234ENST00000552645 Q5W150 140 aa5.37□□□□□ -1.55
LETMD1-234ENST00000552645 MUC2Q02817 5179 aa5.35□□□□□ -1.55
LETMD1-234ENST00000552645 NOTCH2NLQ7Z3S9 236 aa5.34□□□□□ -1.55
LETMD1-234ENST00000552645 RPL37P61927 97 aaKnown RBP5.34□□□□□ -1.56
LETMD1-234ENST00000552645 IGKV2-30P06310 120 aa5.33□□□□□ -1.56
LETMD1-234ENST00000552645 MUC17Q685J3 4493 aa5.3□□□□□ -1.56
LETMD1-234ENST00000552645 KRTAP4-1Q9BYQ7 146 aa5.3□□□□□ -1.56
LETMD1-234ENST00000552645 KRTAP25-1Q3LHN0 102 aa5.29□□□□□ -1.56
LETMD1-234ENST00000552645 ROMO1P60602 79 aa5.27□□□□□ -1.57
LETMD1-234ENST00000552645 C20orf166-AS1Q96NR2 134 aa5.27□□□□□ -1.57
LETMD1-234ENST00000552645 A8MUU9 505 aa5.26□□□□□ -1.57
LETMD1-234ENST00000552645 KRTAP16-1A8MUX0 517 aa5.26□□□□□ -1.57
LETMD1-234ENST00000552645 IGKV2D-30A0A075B6S6 120 aa5.24□□□□□ -1.57
LETMD1-234ENST00000552645 H0YAA0 97 aa5.16□□□□□ -1.58
LETMD1-234ENST00000552645 FAT4Q6V0I7 4981 aa5.15□□□□□ -1.59
LETMD1-234ENST00000552645 COX6B2Q6YFQ2 88 aa5.15□□□□□ -1.59
LETMD1-234ENST00000552645 KRTAP19-2Q3LHN2 52 aa5.11□□□□□ -1.59
LETMD1-234ENST00000552645 LCE2DQ5TA82 110 aaPredicted RBP5.1□□□□□ -1.59
LETMD1-234ENST00000552645 LCE2CQ5TA81 110 aa5.09□□□□□ -1.59
LETMD1-234ENST00000552645 P0C880 135 aa5.08□□□□□ -1.6
LETMD1-234ENST00000552645 LCE2AQ5TA79 106 aaPredicted RBP5.08□□□□□ -1.6
LETMD1-234ENST00000552645 A0A1B0GU33 70 aa5.07□□□□□ -1.6
LETMD1-234ENST00000552645 K7ERS5 55 aa5.07□□□□□ -1.6
LETMD1-234ENST00000552645 H1FX-AS1Q4G0G2 97 aa5.07□□□□□ -1.6
LETMD1-234ENST00000552645 KRTAP3-3Q9BYR6 98 aa5.06□□□□□ -1.6
LETMD1-234ENST00000552645 KRTAP3-2Q9BYR7 98 aa5.06□□□□□ -1.6
LETMD1-234ENST00000552645 M0R2T5 61 aa5.05□□□□□ -1.6
LETMD1-234ENST00000552645 MT1HP80294 61 aa5.05□□□□□ -1.6
LETMD1-234ENST00000552645 A0A0A0MQY5 61 aa5.04□□□□□ -1.6
LETMD1-234ENST00000552645 FLGP20930 4061 aaPredicted RBP4.96□□□□□ -1.62
LETMD1-234ENST00000552645 KRTAP10-6P60371 365 aaPredicted RBP4.92□□□□□ -1.62
LETMD1-234ENST00000552645 SPINT4Q6UDR6 99 aa4.92□□□□□ -1.62
LETMD1-234ENST00000552645 KRTAP15-1Q3LI76 137 aa4.91□□□□□ -1.62
LETMD1-234ENST00000552645 LORP23490 312 aaPredicted RBP4.89□□□□□ -1.63
LETMD1-234ENST00000552645 CRIPTQ9P021 101 aa4.89□□□□□ -1.63
LETMD1-234ENST00000552645 KRTAP3-1Q9BYR8 98 aa4.87□□□□□ -1.63
LETMD1-234ENST00000552645 NDUFAF8A1L188 74 aa4.85□□□□□ -1.63
LETMD1-234ENST00000552645 KRTAP9-2Q9BYQ4 174 aa4.83□□□□□ -1.64
LETMD1-234ENST00000552645 KRTAP9-8Q9BYQ0 159 aa4.79□□□□□ -1.64
LETMD1-234ENST00000552645 S4R3F8 94 aa4.77□□□□□ -1.65
LETMD1-234ENST00000552645 MT2AP02795 61 aa4.75□□□□□ -1.65
LETMD1-234ENST00000552645 KRTAP10-10P60014 251 aa4.75□□□□□ -1.65
LETMD1-234ENST00000552645 FSIP2Q5CZC0 6907 aa4.74□□□□□ -1.65
LETMD1-234ENST00000552645 MT1FP04733 61 aa4.72□□□□□ -1.65
LETMD1-234ENST00000552645 KRTAP13-4Q3LI77 160 aa4.72□□□□□ -1.65
LETMD1-234ENST00000552645 C10orf95Q9H7T3 257 aa4.72□□□□□ -1.65
LETMD1-234ENST00000552645 A0A0D9SG42 100 aa4.67□□□□□ -1.66
LETMD1-234ENST00000552645 KRTAP9-3Q9BYQ3 159 aa4.62□□□□□ -1.67
LETMD1-234ENST00000552645 KRTAP12-2P59991 146 aa4.61□□□□□ -1.67
LETMD1-234ENST00000552645 LUZP6Q538Z0 58 aa4.61□□□□□ -1.67
LETMD1-234ENST00000552645 KRTAP9-6A0A140TA67 174 aa4.6□□□□□ -1.67
LETMD1-234ENST00000552645 KRTAP12-1P59990 96 aa4.6□□□□□ -1.67
LETMD1-234ENST00000552645 CRCT1Q9UGL9 99 aa4.59□□□□□ -1.67
LETMD1-234ENST00000552645 LCE2BO14633 110 aa4.58□□□□□ -1.68
LETMD1-234ENST00000552645 USH2AO75445 5202 aa4.54□□□□□ -1.68
LETMD1-234ENST00000552645 M0QZ58 72 aa4.53□□□□□ -1.68
LETMD1-234ENST00000552645 KRTAP19-1Q8IUB9 90 aa4.48□□□□□ -1.69
LETMD1-234ENST00000552645 PLAC4Q8WY50 150 aa4.48□□□□□ -1.69
LETMD1-234ENST00000552645 SPRR2GQ9BYE4 73 aa4.44□□□□□ -1.7
LETMD1-234ENST00000552645 SSPOA2VEC9 5147 aa4.44□□□□□ -1.7
LETMD1-234ENST00000552645 R4GN34 69 aa4.39□□□□□ -1.71
LETMD1-234ENST00000552645 KRTAP19-8Q3LI54 63 aa4.38□□□□□ -1.71
LETMD1-234ENST00000552645 PP632Q6XCG6 107 aa4.38□□□□□ -1.71
LETMD1-234ENST00000552645 MT1BP07438 61 aa4.36□□□□□ -1.71
LETMD1-234ENST00000552645 KRTAP19-6Q3LI70 58 aa4.36□□□□□ -1.71
LETMD1-234ENST00000552645 KRTAP23-1A1A580 65 aa4.35□□□□□ -1.71
LETMD1-234ENST00000552645 FCGBPQ9Y6R7 5405 aaPredicted RBP4.35□□□□□ -1.71
LETMD1-234ENST00000552645 MACF1Q9UPN3 7388 aaKnown RBP4.28□□□□□ -1.72
LETMD1-234ENST00000552645 KRTAP9-1A8MXZ3 250 aaPredicted RBP4.26□□□□□ -1.73
LETMD1-234ENST00000552645 KRTAP10-5P60370 271 aa4.23□□□□□ -1.73
LETMD1-234ENST00000552645 SPRR5A0A1B0GTR4 108 aa4.22□□□□□ -1.73
LETMD1-234ENST00000552645 SYNE2Q8WXH0 6885 aaKnown RBP4.21□□□□□ -1.74
LETMD1-234ENST00000552645 CAMK2N1Q7Z7J9 78 aa4.19□□□□□ -1.74
LETMD1-234ENST00000552645 PRO2289Q9P1D8 64 aa4.17□□□□□ -1.74
LETMD1-234ENST00000552645 KRTAP9-7A8MTY7 169 aa4.16□□□□□ -1.74
LETMD1-234ENST00000552645 MT1XP80297 61 aa4.15□□□□□ -1.74
LETMD1-234ENST00000552645 INE1O15225 51 aa4.04□□□□□ -1.76
LETMD1-234ENST00000552645 KRTAP6-3Q3LI67 103 aa4.03□□□□□ -1.77
LETMD1-234ENST00000552645 TNP1P09430 55 aa4.02□□□□□ -1.77
LETMD1-234ENST00000552645 KRTAP10-7P60409 375 aaPredicted RBP3.99□□□□□ -1.77
LETMD1-234ENST00000552645 KMT2DO14686 5537 aa3.99□□□□□ -1.77
LETMD1-234ENST00000552645 LOC100996750A0A140TA64 210 aa3.96□□□□□ -1.78
LETMD1-234ENST00000552645 KRTAP4-6Q9BYQ5 205 aa3.96□□□□□ -1.78
LETMD1-234ENST00000552645 KRTAP8-1Q8IUC2 63 aa3.94□□□□□ -1.78
LETMD1-234ENST00000552645 KRTAP4-8A0A0G2JLE6 195 aa3.93□□□□□ -1.78
LETMD1-234ENST00000552645 KRTAP4-8Q9BYQ9 185 aa3.93□□□□□ -1.78
LETMD1-234ENST00000552645 KRTAP10-12P60413 245 aa3.92□□□□□ -1.78
Retrieved 100 of 20,778 RNA–protein pairs in 234.7 ms