RNA–Protein interactions for RNA: ENST00000552516.5

TGFBR1-209, Transcript of transforming growth factor beta receptor 1, humanhuman

TSL 1 (best) BASIC

Gene TGFBR1, Length 5,933 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TGFBR1-209ENST00000552516 H0YAA0 97 aa5.54□□□□□ -1.52
TGFBR1-209ENST00000552516 DNAH2Q9P225 4427 aa5.54□□□□□ -1.52
TGFBR1-209ENST00000552516 DYNC1H1Q14204 4646 aaKnown RBP5.54□□□□□ -1.52
TGFBR1-209ENST00000552516 PKHD1P08F94 4074 aa5.51□□□□□ -1.53
TGFBR1-209ENST00000552516 LRP1Q07954 4544 aaKnown RBP5.51□□□□□ -1.53
TGFBR1-209ENST00000552516 ROMO1P60602 79 aa5.5□□□□□ -1.53
TGFBR1-209ENST00000552516 KRTAP3-1Q9BYR8 98 aa5.5□□□□□ -1.53
TGFBR1-209ENST00000552516 SACSQ9NZJ4 4579 aa5.44□□□□□ -1.54
TGFBR1-209ENST00000552516 LUZP6Q538Z0 58 aa5.44□□□□□ -1.54
TGFBR1-209ENST00000552516 DNAH3Q8TD57 4116 aa5.43□□□□□ -1.54
TGFBR1-209ENST00000552516 KMT2CQ8NEZ4 4911 aaKnown RBP5.42□□□□□ -1.54
TGFBR1-209ENST00000552516 RYR3Q15413 4870 aa5.42□□□□□ -1.54
TGFBR1-209ENST00000552516 KRTAP10-4P60372 401 aaPredicted RBP5.41□□□□□ -1.54
TGFBR1-209ENST00000552516 TPRXLQ17RH7 258 aa5.39□□□□□ -1.55
TGFBR1-209ENST00000552516 MT1HL1P0DM35 61 aa5.39□□□□□ -1.55
TGFBR1-209ENST00000552516 DYNC2H1Q8NCM8 4307 aaKnown RBP5.38□□□□□ -1.55
TGFBR1-209ENST00000552516 HECTD4Q9Y4D8 3996 aa5.38□□□□□ -1.55
TGFBR1-209ENST00000552516 APOBP04114 4563 aaKnown RBP5.37□□□□□ -1.55
TGFBR1-209ENST00000552516 KRTAP25-1Q3LHN0 102 aa5.34□□□□□ -1.55
TGFBR1-209ENST00000552516 PLAC4Q8WY50 150 aa5.32□□□□□ -1.56
TGFBR1-209ENST00000552516 KRTAP13-4Q3LI77 160 aa5.31□□□□□ -1.56
TGFBR1-209ENST00000552516 KRTAP17-1Q9BYP8 105 aa5.29□□□□□ -1.56
TGFBR1-209ENST00000552516 KRTAP12-2P59991 146 aa5.28□□□□□ -1.56
TGFBR1-209ENST00000552516 KRTAP10-10P60014 251 aa5.27□□□□□ -1.57
TGFBR1-209ENST00000552516 H3BS24 57 aa5.27□□□□□ -1.57
TGFBR1-209ENST00000552516 FAT2Q9NYQ8 4349 aa5.24□□□□□ -1.57
TGFBR1-209ENST00000552516 LRP2P98164 4655 aa5.24□□□□□ -1.57
TGFBR1-209ENST00000552516 ALMS1Q8TCU4 4167 aa5.24□□□□□ -1.57
TGFBR1-209ENST00000552516 NDUFAF8A1L188 74 aa5.19□□□□□ -1.58
TGFBR1-209ENST00000552516 KRTAP10-6P60371 365 aaPredicted RBP5.18□□□□□ -1.58
TGFBR1-209ENST00000552516 KRTAP3-3Q9BYR6 98 aa5.16□□□□□ -1.58
TGFBR1-209ENST00000552516 LPAP08519 4548 aa5.15□□□□□ -1.58
TGFBR1-209ENST00000552516 A0A0A0MQY5 61 aa5.15□□□□□ -1.59
TGFBR1-209ENST00000552516 RYR2Q92736 4967 aa5.15□□□□□ -1.59
TGFBR1-209ENST00000552516 EPPK1P58107 5090 aaKnown RBP5.14□□□□□ -1.59
TGFBR1-209ENST00000552516 KRTAP12-1P59990 96 aa5.11□□□□□ -1.59
TGFBR1-209ENST00000552516 LORP23490 312 aaPredicted RBP5.1□□□□□ -1.59
TGFBR1-209ENST00000552516 HERC2O95714 4834 aa5.08□□□□□ -1.6
TGFBR1-209ENST00000552516 TNP1P09430 55 aa5.08□□□□□ -1.6
TGFBR1-209ENST00000552516 KRTAP3-2Q9BYR7 98 aa5.07□□□□□ -1.6
TGFBR1-209ENST00000552516 KRTAP4-1Q9BYQ7 146 aa5.06□□□□□ -1.6
TGFBR1-209ENST00000552516 PKD1P98161 4303 aa5.05□□□□□ -1.6
TGFBR1-209ENST00000552516 HSPG2P98160 4391 aa5.03□□□□□ -1.6
TGFBR1-209ENST00000552516 MUC2Q02817 5179 aa5□□□□□ -1.61
TGFBR1-209ENST00000552516 PCLOQ9Y6V0 5065 aa4.99□□□□□ -1.61
TGFBR1-209ENST00000552516 FSIP2Q5CZC0 6907 aa4.92□□□□□ -1.62
TGFBR1-209ENST00000552516 RNF213Q63HN8 5207 aa4.9□□□□□ -1.63
TGFBR1-209ENST00000552516 ABCA13Q86UQ4 5058 aa4.89□□□□□ -1.63
TGFBR1-209ENST00000552516 HERC1Q15751 4861 aa4.86□□□□□ -1.63
TGFBR1-209ENST00000552516 PKHD1L1Q86WI1 4243 aa4.82□□□□□ -1.64
TGFBR1-209ENST00000552516 FAT4Q6V0I7 4981 aa4.79□□□□□ -1.64
TGFBR1-209ENST00000552516 UBR4Q5T4S7 5183 aa4.76□□□□□ -1.65
TGFBR1-209ENST00000552516 TNXBP22105 4242 aa4.7□□□□□ -1.66
TGFBR1-209ENST00000552516 PP632Q6XCG6 107 aa4.69□□□□□ -1.66
TGFBR1-209ENST00000552516 PRO2289Q9P1D8 64 aa4.66□□□□□ -1.66
TGFBR1-209ENST00000552516 BIRC6Q9NR09 4857 aa4.66□□□□□ -1.66
TGFBR1-209ENST00000552516 MT1HP80294 61 aa4.62□□□□□ -1.67
TGFBR1-209ENST00000552516 CRCT1Q9UGL9 99 aa4.59□□□□□ -1.68
TGFBR1-209ENST00000552516 LCE3AQ5TA76 89 aa4.57□□□□□ -1.68
TGFBR1-209ENST00000552516 MT1FP04733 61 aa4.56□□□□□ -1.68
TGFBR1-209ENST00000552516 KRTAP15-1Q3LI76 137 aa4.54□□□□□ -1.68
TGFBR1-209ENST00000552516 MT2AP02795 61 aa4.53□□□□□ -1.68
TGFBR1-209ENST00000552516 KRTAP10-12P60413 245 aa4.5□□□□□ -1.69
TGFBR1-209ENST00000552516 HMCN2Q8NDA2 5059 aa4.49□□□□□ -1.69
TGFBR1-209ENST00000552516 OBSCNQ5VST9 7968 aa4.44□□□□□ -1.7
TGFBR1-209ENST00000552516 KRTAP12-3P60328 96 aa4.39□□□□□ -1.71
TGFBR1-209ENST00000552516 USH2AO75445 5202 aa4.38□□□□□ -1.71
TGFBR1-209ENST00000552516 KRTAP19-1Q8IUB9 90 aa4.36□□□□□ -1.71
TGFBR1-209ENST00000552516 LCE2CQ5TA81 110 aa4.35□□□□□ -1.71
TGFBR1-209ENST00000552516 MUC17Q685J3 4493 aa4.34□□□□□ -1.72
TGFBR1-209ENST00000552516 SPRR2GQ9BYE4 73 aa4.3□□□□□ -1.72
TGFBR1-209ENST00000552516 KRTAP10-7P60409 375 aaPredicted RBP4.27□□□□□ -1.73
TGFBR1-209ENST00000552516 KRTAP19-2Q3LHN2 52 aa4.26□□□□□ -1.73
TGFBR1-209ENST00000552516 FLGP20930 4061 aaPredicted RBP4.26□□□□□ -1.73
TGFBR1-209ENST00000552516 KRTAP9-8Q9BYQ0 159 aa4.26□□□□□ -1.73
TGFBR1-209ENST00000552516 KRTAP4-8A0A0G2JLE6 195 aa4.24□□□□□ -1.73
TGFBR1-209ENST00000552516 KRTAP4-8Q9BYQ9 185 aa4.24□□□□□ -1.73
TGFBR1-209ENST00000552516 KMT2DO14686 5537 aa4.22□□□□□ -1.73
TGFBR1-209ENST00000552516 DSTQ03001 7570 aaKnown RBP4.2□□□□□ -1.74
TGFBR1-209ENST00000552516 KRTAP19-5Q3LI72 72 aa4.18□□□□□ -1.74
TGFBR1-209ENST00000552516 SYNE1Q8NF91 8797 aaKnown RBP4.18□□□□□ -1.74
TGFBR1-209ENST00000552516 KRTAP8-1Q8IUC2 63 aa4.17□□□□□ -1.74
TGFBR1-209ENST00000552516 MT1BP07438 61 aa4.16□□□□□ -1.74
TGFBR1-209ENST00000552516 MT1XP80297 61 aa4.14□□□□□ -1.75
TGFBR1-209ENST00000552516 KRTAP10-5P60370 271 aa4.11□□□□□ -1.75
TGFBR1-209ENST00000552516 LCE2BO14633 110 aa4.09□□□□□ -1.76
TGFBR1-209ENST00000552516 KRTAP9-3Q9BYQ3 159 aa4.07□□□□□ -1.76
TGFBR1-209ENST00000552516 FCGBPQ9Y6R7 5405 aaPredicted RBP4.06□□□□□ -1.76
TGFBR1-209ENST00000552516 SPRR2FQ96RM1 72 aa4.05□□□□□ -1.76
TGFBR1-209ENST00000552516 KRTAP4-7Q9BYR0 210 aa4.05□□□□□ -1.76
TGFBR1-209ENST00000552516 KRTAP19-8Q3LI54 63 aa4.01□□□□□ -1.77
TGFBR1-209ENST00000552516 SYNE2Q8WXH0 6885 aaKnown RBP3.99□□□□□ -1.77
TGFBR1-209ENST00000552516 KRTAP23-1A1A580 65 aa3.93□□□□□ -1.78
TGFBR1-209ENST00000552516 LCE3CQ5T5A8 94 aa3.9□□□□□ -1.79
TGFBR1-209ENST00000552516 MT1GP13640 62 aa3.86□□□□□ -1.79
TGFBR1-209ENST00000552516 INE1O15225 51 aa3.83□□□□□ -1.8
TGFBR1-209ENST00000552516 MUC12Q9UKN1 5478 aa3.82□□□□□ -1.8
TGFBR1-209ENST00000552516 KRTAP4-3Q9BYR4 195 aa3.82□□□□□ -1.8
TGFBR1-209ENST00000552516 LOC100996750A0A140TA64 210 aa3.77□□□□□ -1.81
TGFBR1-209ENST00000552516 LCE2AQ5TA79 106 aaPredicted RBP3.77□□□□□ -1.81
Retrieved 100 of 20,778 RNA–protein pairs in 60.2 ms