RNA–Protein interactions for RNA: ENST00000552215.5

CHPT1-208, Transcript of choline phosphotransferase 1, humanhuman

TSL 1 (best)

Gene CHPT1, Length 4,342 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHPT1-208ENST00000552215 A0A0D9SG42 100 aa4.21□□□□□ -1.74
CHPT1-208ENST00000552215 SPTSSBQ8NFR3 76 aa4.21□□□□□ -1.74
CHPT1-208ENST00000552215 A0A1B0GU69 56 aa4.21□□□□□ -1.74
CHPT1-208ENST00000552215 A6NED7 52 aa4.2□□□□□ -1.74
CHPT1-208ENST00000552215 ATP5EP56381 51 aaPredicted RBP4.2□□□□□ -1.74
CHPT1-208ENST00000552215 UBR4Q5T4S7 5183 aa4.2□□□□□ -1.74
CHPT1-208ENST00000552215 A8MUN3 132 aa4.19□□□□□ -1.74
CHPT1-208ENST00000552215 CSAG1Q6PB30 78 aa4.18□□□□□ -1.74
CHPT1-208ENST00000552215 BRK1Q8WUW1 75 aa4.18□□□□□ -1.74
CHPT1-208ENST00000552215 SMIM26A0A096LP01 95 aa4.17□□□□□ -1.74
CHPT1-208ENST00000552215 H1FX-AS1Q4G0G2 97 aa4.15□□□□□ -1.74
CHPT1-208ENST00000552215 SPANXA2-OT1Q8N9U9 137 aa4.15□□□□□ -1.74
CHPT1-208ENST00000552215 LCA10Q71F78 164 aa4.14□□□□□ -1.75
CHPT1-208ENST00000552215 KRTAP4-1Q9BYQ7 146 aa4.14□□□□□ -1.75
CHPT1-208ENST00000552215 DMAC1Q96GE9 116 aa4.14□□□□□ -1.75
CHPT1-208ENST00000552215 TNXBP22105 4242 aa4.13□□□□□ -1.75
CHPT1-208ENST00000552215 ADM2Q7Z4H4 148 aa4.12□□□□□ -1.75
CHPT1-208ENST00000552215 SPINT4Q6UDR6 99 aa4.09□□□□□ -1.75
CHPT1-208ENST00000552215 KRTAP3-1Q9BYR8 98 aa4.09□□□□□ -1.75
CHPT1-208ENST00000552215 SPATA8Q6RVD6 105 aa4.08□□□□□ -1.76
CHPT1-208ENST00000552215 V9GYY9 64 aa4.06□□□□□ -1.76
CHPT1-208ENST00000552215 R4GN34 69 aa4.06□□□□□ -1.76
CHPT1-208ENST00000552215 M0QZ58 72 aa4.04□□□□□ -1.76
CHPT1-208ENST00000552215 FAT4Q6V0I7 4981 aa4.03□□□□□ -1.76
CHPT1-208ENST00000552215 FSIP2Q5CZC0 6907 aa4.02□□□□□ -1.77
CHPT1-208ENST00000552215 A0A1B0GU33 70 aa4.02□□□□□ -1.77
CHPT1-208ENST00000552215 KRTAP10-10P60014 251 aa4.02□□□□□ -1.77
CHPT1-208ENST00000552215 RPS28P62857 69 aaKnown RBP4.01□□□□□ -1.77
CHPT1-208ENST00000552215 P0C880 135 aa4□□□□□ -1.77
CHPT1-208ENST00000552215 A8MU10 97 aa3.99□□□□□ -1.77
CHPT1-208ENST00000552215 UQCR11O14957 56 aa3.99□□□□□ -1.77
CHPT1-208ENST00000552215 HMCN2Q8NDA2 5059 aa3.98□□□□□ -1.77
CHPT1-208ENST00000552215 K7ERS5 55 aa3.98□□□□□ -1.77
CHPT1-208ENST00000552215 MIR22HGQ0VDD5 57 aa3.98□□□□□ -1.77
CHPT1-208ENST00000552215 CAMK2N1Q7Z7J9 78 aa3.94□□□□□ -1.78
CHPT1-208ENST00000552215 LINC01558Q9Y6Z2 57 aa3.94□□□□□ -1.78
CHPT1-208ENST00000552215 Q5VV11 94 aa3.93□□□□□ -1.78
CHPT1-208ENST00000552215 PMAIP1Q13794 54 aa3.91□□□□□ -1.78
CHPT1-208ENST00000552215 Q1T7F1 81 aa3.91□□□□□ -1.78
CHPT1-208ENST00000552215 CRIPTQ9P021 101 aa3.9□□□□□ -1.79
CHPT1-208ENST00000552215 SVIPQ8NHG7 77 aa3.88□□□□□ -1.79
CHPT1-208ENST00000552215 MT1HP80294 61 aa3.84□□□□□ -1.79
CHPT1-208ENST00000552215 PLAC4Q8WY50 150 aa3.82□□□□□ -1.8
CHPT1-208ENST00000552215 KRTAP13-4Q3LI77 160 aa3.79□□□□□ -1.8
CHPT1-208ENST00000552215 H0YAA0 97 aa3.78□□□□□ -1.8
CHPT1-208ENST00000552215 CDC42SE1Q9NRR8 79 aa3.78□□□□□ -1.8
CHPT1-208ENST00000552215 KRTAP10-6P60371 365 aaPredicted RBP3.77□□□□□ -1.81
CHPT1-208ENST00000552215 PRO0628Q9UI54 55 aa3.72□□□□□ -1.81
CHPT1-208ENST00000552215 KRTAP19-2Q3LHN2 52 aa3.71□□□□□ -1.82
CHPT1-208ENST00000552215 PRAC1Q96KF2 57 aa3.7□□□□□ -1.82
CHPT1-208ENST00000552215 MT1FP04733 61 aa3.7□□□□□ -1.82
CHPT1-208ENST00000552215 MT2AP02795 61 aa3.7□□□□□ -1.82
CHPT1-208ENST00000552215 MUC17Q685J3 4493 aa3.69□□□□□ -1.82
CHPT1-208ENST00000552215 KRTAP12-2P59991 146 aa3.68□□□□□ -1.82
CHPT1-208ENST00000552215 USH2AO75445 5202 aa3.64□□□□□ -1.83
CHPT1-208ENST00000552215 FLGP20930 4061 aaPredicted RBP3.63□□□□□ -1.83
CHPT1-208ENST00000552215 C10orf95Q9H7T3 257 aa3.61□□□□□ -1.83
CHPT1-208ENST00000552215 KRTAP12-1P59990 96 aa3.61□□□□□ -1.83
CHPT1-208ENST00000552215 KRTAP9-8Q9BYQ0 159 aa3.59□□□□□ -1.84
CHPT1-208ENST00000552215 ROMO1P60602 79 aa3.58□□□□□ -1.84
CHPT1-208ENST00000552215 A6NN06 94 aa3.57□□□□□ -1.84
CHPT1-208ENST00000552215 H3BS24 57 aa3.56□□□□□ -1.84
CHPT1-208ENST00000552215 TNP1P09430 55 aa3.51□□□□□ -1.85
CHPT1-208ENST00000552215 KRTAP19-1Q8IUB9 90 aa3.51□□□□□ -1.85
CHPT1-208ENST00000552215 PRO2289Q9P1D8 64 aa3.49□□□□□ -1.85
CHPT1-208ENST00000552215 KTN1-AS1Q86SY8 53 aa3.48□□□□□ -1.85
CHPT1-208ENST00000552215 KRTAP9-3Q9BYQ3 159 aa3.45□□□□□ -1.86
CHPT1-208ENST00000552215 SPRR2GQ9BYE4 73 aa3.43□□□□□ -1.86
CHPT1-208ENST00000552215 KRTAP9-2Q9BYQ4 174 aa3.39□□□□□ -1.87
CHPT1-208ENST00000552215 MT1BP07438 61 aa3.38□□□□□ -1.87
CHPT1-208ENST00000552215 KMT2DO14686 5537 aa3.35□□□□□ -1.87
CHPT1-208ENST00000552215 KRTAP25-1Q3LHN0 102 aa3.34□□□□□ -1.88
CHPT1-208ENST00000552215 KRTAP9-9Q9BYP9 154 aa3.34□□□□□ -1.88
CHPT1-208ENST00000552215 KRTAP9-4Q9BYQ2 154 aa3.34□□□□□ -1.88
CHPT1-208ENST00000552215 KRTAP10-12P60413 245 aa3.31□□□□□ -1.88
CHPT1-208ENST00000552215 LCE4AQ5TA78 99 aa3.31□□□□□ -1.88
CHPT1-208ENST00000552215 KRTAP4-8A0A0G2JLE6 195 aa3.3□□□□□ -1.88
CHPT1-208ENST00000552215 KRTAP4-8Q9BYQ9 185 aa3.3□□□□□ -1.88
CHPT1-208ENST00000552215 KRTAP10-7P60409 375 aaPredicted RBP3.3□□□□□ -1.88
CHPT1-208ENST00000552215 KRTAP19-8Q3LI54 63 aa3.29□□□□□ -1.88
CHPT1-208ENST00000552215 LCE3AQ5TA76 89 aa3.29□□□□□ -1.88
CHPT1-208ENST00000552215 SSPOA2VEC9 5147 aa3.29□□□□□ -1.88
CHPT1-208ENST00000552215 MT1XP80297 61 aa3.28□□□□□ -1.88
CHPT1-208ENST00000552215 CRCT1Q9UGL9 99 aa3.28□□□□□ -1.88
CHPT1-208ENST00000552215 SYNE2Q8WXH0 6885 aaKnown RBP3.28□□□□□ -1.88
CHPT1-208ENST00000552215 KRTAP10-5P60370 271 aa3.26□□□□□ -1.89
CHPT1-208ENST00000552215 KRTAP8-1Q8IUC2 63 aa3.25□□□□□ -1.89
CHPT1-208ENST00000552215 DSTQ03001 7570 aaKnown RBP3.23□□□□□ -1.89
CHPT1-208ENST00000552215 MACF1Q9UPN3 7388 aaKnown RBP3.21□□□□□ -1.89
CHPT1-208ENST00000552215 FCGBPQ9Y6R7 5405 aaPredicted RBP3.2□□□□□ -1.9
CHPT1-208ENST00000552215 SPRR2FQ96RM1 72 aa3.2□□□□□ -1.9
CHPT1-208ENST00000552215 PP632Q6XCG6 107 aa3.17□□□□□ -1.9
CHPT1-208ENST00000552215 KRTAP12-3P60328 96 aa3.16□□□□□ -1.9
CHPT1-208ENST00000552215 A0A0A0MQY5 61 aa3.15□□□□□ -1.9
CHPT1-208ENST00000552215 KRTAP9-6A0A140TA67 174 aa3.15□□□□□ -1.9
CHPT1-208ENST00000552215 KRTAP9-7A8MTY7 169 aa3.15□□□□□ -1.9
CHPT1-208ENST00000552215 KRTAP19-5Q3LI72 72 aa3.14□□□□□ -1.91
CHPT1-208ENST00000552215 KRTAP15-1Q3LI76 137 aa3.13□□□□□ -1.91
CHPT1-208ENST00000552215 LUZP6Q538Z0 58 aa3.13□□□□□ -1.91
CHPT1-208ENST00000552215 MUC12Q9UKN1 5478 aa3.13□□□□□ -1.91
Retrieved 100 of 20,778 RNA–protein pairs in 15.6 ms