RNA–Protein interactions for RNA: ENST00000551179.1

CNOT2-229, Transcript of CCR4-NOT transcription complex subunit 2, humanhuman

TSL 2

Gene CNOT2, Length 355 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT2-229ENST00000551179 Q75L30 129 aa5.6□□□□□ -1.51
CNOT2-229ENST00000551179 KRTAP10-8P60410 259 aa5.59□□□□□ -1.51
CNOT2-229ENST00000551179 DYNC1H1Q14204 4646 aaKnown RBP5.59□□□□□ -1.51
CNOT2-229ENST00000551179 ATP11AUNQ6ZP68 121 aa5.58□□□□□ -1.52
CNOT2-229ENST00000551179 RYR2Q92736 4967 aa5.58□□□□□ -1.52
CNOT2-229ENST00000551179 A6NED7 52 aa5.57□□□□□ -1.52
CNOT2-229ENST00000551179 Q5VV11 94 aa5.57□□□□□ -1.52
CNOT2-229ENST00000551179 KRTAP15-1Q3LI76 137 aa5.55□□□□□ -1.52
CNOT2-229ENST00000551179 A0A1B0GU69 56 aa5.54□□□□□ -1.52
CNOT2-229ENST00000551179 SEC61GP60059 68 aa5.53□□□□□ -1.52
CNOT2-229ENST00000551179 PKHD1P08F94 4074 aa5.53□□□□□ -1.52
CNOT2-229ENST00000551179 SPINK7P58062 85 aa5.51□□□□□ -1.53
CNOT2-229ENST00000551179 APOBP04114 4563 aaKnown RBP5.5□□□□□ -1.53
CNOT2-229ENST00000551179 KMT2CQ8NEZ4 4911 aaKnown RBP5.49□□□□□ -1.53
CNOT2-229ENST00000551179 RPL37P61927 97 aaKnown RBP5.49□□□□□ -1.53
CNOT2-229ENST00000551179 CDC42SE1Q9NRR8 79 aa5.47□□□□□ -1.53
CNOT2-229ENST00000551179 PKHD1L1Q86WI1 4243 aa5.44□□□□□ -1.54
CNOT2-229ENST00000551179 COX6B2Q6YFQ2 88 aa5.44□□□□□ -1.54
CNOT2-229ENST00000551179 FLG2Q5D862 2391 aaPredicted RBP5.43□□□□□ -1.54
CNOT2-229ENST00000551179 UQCR11O14957 56 aa5.41□□□□□ -1.54
CNOT2-229ENST00000551179 MT1HL1P0DM35 61 aa5.41□□□□□ -1.54
CNOT2-229ENST00000551179 TPRXLQ17RH7 258 aa5.4□□□□□ -1.54
CNOT2-229ENST00000551179 RYR3Q15413 4870 aa5.38□□□□□ -1.55
CNOT2-229ENST00000551179 MIR22HGQ0VDD5 57 aa5.36□□□□□ -1.55
CNOT2-229ENST00000551179 FAT1Q14517 4588 aa5.36□□□□□ -1.55
CNOT2-229ENST00000551179 PMAIP1Q13794 54 aa5.35□□□□□ -1.55
CNOT2-229ENST00000551179 LCA10Q71F78 164 aa5.34□□□□□ -1.55
CNOT2-229ENST00000551179 RYR1P21817 5038 aa5.33□□□□□ -1.56
CNOT2-229ENST00000551179 RBM12B-AS1Q9P1G2 102 aa5.33□□□□□ -1.56
CNOT2-229ENST00000551179 S4R3F8 94 aa5.31□□□□□ -1.56
CNOT2-229ENST00000551179 HSPG2P98160 4391 aa5.3□□□□□ -1.56
CNOT2-229ENST00000551179 SPATA8Q6RVD6 105 aa5.29□□□□□ -1.56
CNOT2-229ENST00000551179 SEC61BP60468 96 aaKnown RBP5.28□□□□□ -1.56
CNOT2-229ENST00000551179 A0A1B0GU33 70 aa5.25□□□□□ -1.57
CNOT2-229ENST00000551179 A8MU10 97 aa5.25□□□□□ -1.57
CNOT2-229ENST00000551179 H1FX-AS1Q4G0G2 97 aa5.25□□□□□ -1.57
CNOT2-229ENST00000551179 TNXBP22105 4242 aa5.23□□□□□ -1.57
CNOT2-229ENST00000551179 DMBT1Q9UGM3 2413 aaPredicted RBP5.23□□□□□ -1.57
CNOT2-229ENST00000551179 K7ERS5 55 aa5.22□□□□□ -1.57
CNOT2-229ENST00000551179 KTN1-AS1Q86SY8 53 aa5.22□□□□□ -1.57
CNOT2-229ENST00000551179 FAT3Q8TDW7 4589 aa5.2□□□□□ -1.58
CNOT2-229ENST00000551179 A6NN06 94 aa5.2□□□□□ -1.58
CNOT2-229ENST00000551179 LRP1Q07954 4544 aaKnown RBP5.17□□□□□ -1.58
CNOT2-229ENST00000551179 KIAA1109Q2LD37 5005 aa5.16□□□□□ -1.58
CNOT2-229ENST00000551179 EPPK1P58107 5090 aaKnown RBP5.16□□□□□ -1.58
CNOT2-229ENST00000551179 CSAG1Q6PB30 78 aa5.15□□□□□ -1.59
CNOT2-229ENST00000551179 H0YAA0 97 aa5.12□□□□□ -1.59
CNOT2-229ENST00000551179 MYCBP2O75592 4640 aa5.05□□□□□ -1.6
CNOT2-229ENST00000551179 ADM2Q7Z4H4 148 aa5.05□□□□□ -1.6
CNOT2-229ENST00000551179 BIRC6Q9NR09 4857 aa5.03□□□□□ -1.6
CNOT2-229ENST00000551179 KRTAP10-6P60371 365 aaPredicted RBP5.02□□□□□ -1.61
CNOT2-229ENST00000551179 M0QZ58 72 aa5□□□□□ -1.61
CNOT2-229ENST00000551179 HERC2O95714 4834 aa4.98□□□□□ -1.61
CNOT2-229ENST00000551179 A0A0D9SG42 100 aa4.98□□□□□ -1.61
CNOT2-229ENST00000551179 P0C880 135 aa4.98□□□□□ -1.61
CNOT2-229ENST00000551179 R4GN34 69 aa4.93□□□□□ -1.62
CNOT2-229ENST00000551179 PRAC1Q96KF2 57 aa4.91□□□□□ -1.62
CNOT2-229ENST00000551179 KRTAP13-4Q3LI77 160 aa4.9□□□□□ -1.63
CNOT2-229ENST00000551179 ROMO1P60602 79 aa4.89□□□□□ -1.63
CNOT2-229ENST00000551179 SPINT4Q6UDR6 99 aa4.89□□□□□ -1.63
CNOT2-229ENST00000551179 KRTAP5-6Q6L8G9 129 aaPredicted RBP4.88□□□□□ -1.63
CNOT2-229ENST00000551179 KRTAP4-1Q9BYQ7 146 aa4.88□□□□□ -1.63
CNOT2-229ENST00000551179 ABCA13Q86UQ4 5058 aa4.88□□□□□ -1.63
CNOT2-229ENST00000551179 LRP2P98164 4655 aa4.83□□□□□ -1.64
CNOT2-229ENST00000551179 LINC01554Q52M75 96 aa4.82□□□□□ -1.64
CNOT2-229ENST00000551179 KRTAP25-1Q3LHN0 102 aa4.8□□□□□ -1.64
CNOT2-229ENST00000551179 LPAP08519 4548 aa4.8□□□□□ -1.64
CNOT2-229ENST00000551179 KRTAP12-1P59990 96 aa4.79□□□□□ -1.64
CNOT2-229ENST00000551179 CRIPTQ9P021 101 aa4.79□□□□□ -1.64
CNOT2-229ENST00000551179 KRTAP12-2P59991 146 aa4.78□□□□□ -1.64
CNOT2-229ENST00000551179 MUC17Q685J3 4493 aa4.77□□□□□ -1.65
CNOT2-229ENST00000551179 KRTAP19-2Q3LHN2 52 aa4.75□□□□□ -1.65
CNOT2-229ENST00000551179 LCE1AQ5T7P2 110 aa4.75□□□□□ -1.65
CNOT2-229ENST00000551179 PCLOQ9Y6V0 5065 aa4.73□□□□□ -1.65
CNOT2-229ENST00000551179 M0R2T5 61 aa4.72□□□□□ -1.65
CNOT2-229ENST00000551179 A0A0A0MQY5 61 aa4.68□□□□□ -1.66
CNOT2-229ENST00000551179 CAMK2N1Q7Z7J9 78 aa4.68□□□□□ -1.66
CNOT2-229ENST00000551179 HERC1Q15751 4861 aa4.62□□□□□ -1.67
CNOT2-229ENST00000551179 HMCN2Q8NDA2 5059 aa4.62□□□□□ -1.67
CNOT2-229ENST00000551179 MT1HP80294 61 aa4.56□□□□□ -1.68
CNOT2-229ENST00000551179 PLAC4Q8WY50 150 aa4.56□□□□□ -1.68
CNOT2-229ENST00000551179 KRTAP5-11Q6L8G4 156 aa4.55□□□□□ -1.68
CNOT2-229ENST00000551179 C10orf95Q9H7T3 257 aa4.55□□□□□ -1.68
CNOT2-229ENST00000551179 FLGP20930 4061 aaPredicted RBP4.54□□□□□ -1.68
CNOT2-229ENST00000551179 KRTAP10-10P60014 251 aa4.51□□□□□ -1.69
CNOT2-229ENST00000551179 PP632Q6XCG6 107 aa4.51□□□□□ -1.69
CNOT2-229ENST00000551179 SPRR2GQ9BYE4 73 aa4.49□□□□□ -1.69
CNOT2-229ENST00000551179 TNP1P09430 55 aa4.47□□□□□ -1.69
CNOT2-229ENST00000551179 MT2AP02795 61 aa4.43□□□□□ -1.7
CNOT2-229ENST00000551179 MT1FP04733 61 aa4.4□□□□□ -1.71
CNOT2-229ENST00000551179 KRTAP2-2Q9BYT5 123 aa4.39□□□□□ -1.71
CNOT2-229ENST00000551179 KRTAP10-7P60409 375 aaPredicted RBP4.35□□□□□ -1.71
CNOT2-229ENST00000551179 RNF213Q63HN8 5207 aa4.35□□□□□ -1.71
CNOT2-229ENST00000551179 MUC2Q02817 5179 aa4.35□□□□□ -1.71
CNOT2-229ENST00000551179 KRTAP19-8Q3LI54 63 aa4.33□□□□□ -1.72
CNOT2-229ENST00000551179 MT3P25713 68 aa4.32□□□□□ -1.72
CNOT2-229ENST00000551179 UBR4Q5T4S7 5183 aa4.3□□□□□ -1.72
CNOT2-229ENST00000551179 PRO2289Q9P1D8 64 aa4.28□□□□□ -1.72
CNOT2-229ENST00000551179 FAT4Q6V0I7 4981 aa4.22□□□□□ -1.73
CNOT2-229ENST00000551179 KRTAP5-9P26371 169 aa4.21□□□□□ -1.74
Retrieved 100 of 20,778 RNA–protein pairs in 83.6 ms