RNA–Protein interactions for RNA: ENST00000550188.1

ARFGAP1-223, Transcript of ADP ribosylation factor GTPase activating protein 1, human

TSL 5

Gene ARFGAP1, Length 572 nt, Biotype protein coding, Subcellular localisation Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
ARFGAP1-223	ENST00000550188	MT2A	P02795	61 aa		5.82	□□□□□ -1.48
ARFGAP1-223	ENST00000550188	H1FX-AS1	Q4G0G2	97 aa		5.82	□□□□□ -1.48
ARFGAP1-223	ENST00000550188	C20orf197	Q8N268	126 aa		5.82	□□□□□ -1.48
ARFGAP1-223	ENST00000550188	FSIP2	Q5CZC0	6907 aa		5.82	□□□□□ -1.48
ARFGAP1-223	ENST00000550188		A8MUN3	132 aa		5.81	□□□□□ -1.48
ARFGAP1-223	ENST00000550188	KLKP1	Q107X0	134 aa		5.8	□□□□□ -1.48
ARFGAP1-223	ENST00000550188	NDUFC1	O43677	76 aa		5.79	□□□□□ -1.48
ARFGAP1-223	ENST00000550188	SNURF	Q9Y675	71 aa		5.78	□□□□□ -1.48
ARFGAP1-223	ENST00000550188	MT1F	P04733	61 aa		5.77	□□□□□ -1.49
ARFGAP1-223	ENST00000550188	KRTAP10-10	P60014	251 aa		5.76	□□□□□ -1.49
ARFGAP1-223	ENST00000550188	SPANXA2-OT1	Q8N9U9	137 aa		5.73	□□□□□ -1.49
ARFGAP1-223	ENST00000550188	LCE3B	Q5TA77	95 aa		5.72	□□□□□ -1.49
ARFGAP1-223	ENST00000550188	KRTAP4-12	Q9BQ66	201 aa		5.72	□□□□□ -1.49
ARFGAP1-223	ENST00000550188	KRTAP3-1	Q9BYR8	98 aa		5.71	□□□□□ -1.5
ARFGAP1-223	ENST00000550188	ACYP2	P14621	99 aa		5.7	□□□□□ -1.5
ARFGAP1-223	ENST00000550188	DMAC1	Q96GE9	116 aa		5.7	□□□□□ -1.5
ARFGAP1-223	ENST00000550188	KRTAP9-3	Q9BYQ3	159 aa		5.7	□□□□□ -1.5
ARFGAP1-223	ENST00000550188		S4R3F8	94 aa		5.7	□□□□□ -1.5
ARFGAP1-223	ENST00000550188	CSAG1	Q6PB30	78 aa		5.66	□□□□□ -1.5
ARFGAP1-223	ENST00000550188		H3BS24	57 aa		5.65	□□□□□ -1.5
ARFGAP1-223	ENST00000550188	CCDC179	H3BU77	68 aa		5.65	□□□□□ -1.5
ARFGAP1-223	ENST00000550188		H7BZZ5	65 aa		5.64	□□□□□ -1.51
ARFGAP1-223	ENST00000550188	KRTAP19-1	Q8IUB9	90 aa		5.64	□□□□□ -1.51
ARFGAP1-223	ENST00000550188	USH2A	O75445	5202 aa		5.63	□□□□□ -1.51
ARFGAP1-223	ENST00000550188	LCA10	Q71F78	164 aa		5.63	□□□□□ -1.51
ARFGAP1-223	ENST00000550188	SPTSSB	Q8NFR3	76 aa		5.62	□□□□□ -1.51
ARFGAP1-223	ENST00000550188	CHKB-CPT1B	H3BT56	60 aa		5.6	□□□□□ -1.51
ARFGAP1-223	ENST00000550188	ATP5E	P56381	51 aa	Predicted RBP	5.6	□□□□□ -1.51
ARFGAP1-223	ENST00000550188	KRTAP9-9	Q9BYP9	154 aa		5.6	□□□□□ -1.51
ARFGAP1-223	ENST00000550188	KRTAP9-4	Q9BYQ2	154 aa		5.6	□□□□□ -1.51
ARFGAP1-223	ENST00000550188	CYSTM1	Q9H1C7	97 aa		5.56	□□□□□ -1.52
ARFGAP1-223	ENST00000550188	SSPO	A2VEC9	5147 aa		5.56	□□□□□ -1.52
ARFGAP1-223	ENST00000550188	TMEM258	P61165	79 aa		5.55	□□□□□ -1.52
ARFGAP1-223	ENST00000550188	PCP4	P48539	62 aa		5.53	□□□□□ -1.52
ARFGAP1-223	ENST00000550188	COA5	Q86WW8	74 aa		5.5	□□□□□ -1.53
ARFGAP1-223	ENST00000550188	KRTAP4-8	A0A0G2JLE6	195 aa		5.49	□□□□□ -1.53
ARFGAP1-223	ENST00000550188		H0YAA0	97 aa		5.48	□□□□□ -1.53
ARFGAP1-223	ENST00000550188	KRTAP19-6	Q3LI70	58 aa		5.45	□□□□□ -1.54
ARFGAP1-223	ENST00000550188	FCGBP	Q9Y6R7	5405 aa	Predicted RBP	5.44	□□□□□ -1.54
ARFGAP1-223	ENST00000550188	CRIPT	Q9P021	101 aa		5.4	□□□□□ -1.54
ARFGAP1-223	ENST00000550188	SEC61G	P60059	68 aa		5.39	□□□□□ -1.55
ARFGAP1-223	ENST00000550188	SPRR2G	Q9BYE4	73 aa		5.39	□□□□□ -1.55
ARFGAP1-223	ENST00000550188	ADM2	Q7Z4H4	148 aa		5.38	□□□□□ -1.55
ARFGAP1-223	ENST00000550188	SERP1	Q9Y6X1	66 aa		5.37	□□□□□ -1.55
ARFGAP1-223	ENST00000550188	KRTAP9-7	A8MTY7	169 aa		5.35	□□□□□ -1.55
ARFGAP1-223	ENST00000550188		Q5VV11	94 aa		5.35	□□□□□ -1.55
ARFGAP1-223	ENST00000550188	KRTAP19-8	Q3LI54	63 aa		5.34	□□□□□ -1.55
ARFGAP1-223	ENST00000550188	LCE1D	Q5T752	114 aa		5.33	□□□□□ -1.56
ARFGAP1-223	ENST00000550188	MT1B	P07438	61 aa		5.32	□□□□□ -1.56
ARFGAP1-223	ENST00000550188	MACF1	Q9UPN3	7388 aa	Known RBP	5.3	□□□□□ -1.56
ARFGAP1-223	ENST00000550188	PRR15L	Q9BU68	103 aa		5.29	□□□□□ -1.56
ARFGAP1-223	ENST00000550188	KRTAP4-7	Q9BYR0	210 aa		5.29	□□□□□ -1.56
ARFGAP1-223	ENST00000550188		R4GN34	69 aa		5.28	□□□□□ -1.56
ARFGAP1-223	ENST00000550188		A0A1B0GU69	56 aa		5.26	□□□□□ -1.57
ARFGAP1-223	ENST00000550188		P0C880	135 aa		5.26	□□□□□ -1.57
ARFGAP1-223	ENST00000550188	RPS28	P62857	69 aa	Known RBP	5.26	□□□□□ -1.57
ARFGAP1-223	ENST00000550188		V9GYY9	64 aa		5.26	□□□□□ -1.57
ARFGAP1-223	ENST00000550188		A6NN06	94 aa		5.25	□□□□□ -1.57
ARFGAP1-223	ENST00000550188		M0QZ58	72 aa		5.25	□□□□□ -1.57
ARFGAP1-223	ENST00000550188	LINC01558	Q9Y6Z2	57 aa		5.23	□□□□□ -1.57
ARFGAP1-223	ENST00000550188	LCE4A	Q5TA78	99 aa		5.21	□□□□□ -1.58
ARFGAP1-223	ENST00000550188	SMIM26	A0A096LP01	95 aa		5.2	□□□□□ -1.58
ARFGAP1-223	ENST00000550188	KRTAP10-5	P60370	271 aa		5.2	□□□□□ -1.58
ARFGAP1-223	ENST00000550188	SYNE2	Q8WXH0	6885 aa	Known RBP	5.2	□□□□□ -1.58
ARFGAP1-223	ENST00000550188		A0A1B0GU33	70 aa		5.18	□□□□□ -1.58
ARFGAP1-223	ENST00000550188	KRTAP4-9	Q9BYQ8	210 aa		5.18	□□□□□ -1.58
ARFGAP1-223	ENST00000550188		Q1T7F1	81 aa		5.16	□□□□□ -1.58
ARFGAP1-223	ENST00000550188	KRTAP6-3	Q3LI67	103 aa		5.13	□□□□□ -1.59
ARFGAP1-223	ENST00000550188	LINC01554	Q52M75	96 aa		5.1	□□□□□ -1.59
ARFGAP1-223	ENST00000550188	PLAC4	Q8WY50	150 aa		5.1	□□□□□ -1.59
ARFGAP1-223	ENST00000550188	UQCR11	O14957	56 aa		5.08	□□□□□ -1.6
ARFGAP1-223	ENST00000550188	KRTAP4-2	Q9BYR5	136 aa		5.07	□□□□□ -1.6
ARFGAP1-223	ENST00000550188	PRO2289	Q9P1D8	64 aa		5.06	□□□□□ -1.6
ARFGAP1-223	ENST00000550188	PSPHP1	O15172	72 aa		5.03	□□□□□ -1.6
ARFGAP1-223	ENST00000550188	SPATA8	Q6RVD6	105 aa		5.03	□□□□□ -1.6
ARFGAP1-223	ENST00000550188	KRTAP19-4	Q3LI73	84 aa		5.02	□□□□□ -1.61
ARFGAP1-223	ENST00000550188	KRTAP13-4	Q3LI77	160 aa		5.02	□□□□□ -1.61
ARFGAP1-223	ENST00000550188	MT1X	P80297	61 aa		5.01	□□□□□ -1.61
ARFGAP1-223	ENST00000550188	KRTAP4-11	Q9BYQ6	195 aa		4.99	□□□□□ -1.61
ARFGAP1-223	ENST00000550188		A0A0D9SG42	100 aa		4.98	□□□□□ -1.61
ARFGAP1-223	ENST00000550188	SVIP	Q8NHG7	77 aa		4.98	□□□□□ -1.61
ARFGAP1-223	ENST00000550188	MIR22HG	Q0VDD5	57 aa		4.96	□□□□□ -1.62
ARFGAP1-223	ENST00000550188		A6NED7	52 aa		4.94	□□□□□ -1.62
ARFGAP1-223	ENST00000550188	KRTAP5-9	P26371	169 aa		4.93	□□□□□ -1.62
ARFGAP1-223	ENST00000550188	SPINT4	Q6UDR6	99 aa		4.92	□□□□□ -1.62
ARFGAP1-223	ENST00000550188	CAMK2N1	Q7Z7J9	78 aa		4.92	□□□□□ -1.62
ARFGAP1-223	ENST00000550188	LCE5A	Q5TCM9	118 aa		4.91	□□□□□ -1.62
ARFGAP1-223	ENST00000550188		K7ERS5	55 aa		4.9	□□□□□ -1.63
ARFGAP1-223	ENST00000550188		A8MU10	97 aa		4.89	□□□□□ -1.63
ARFGAP1-223	ENST00000550188	KRTAP12-2	P59991	146 aa		4.89	□□□□□ -1.63
ARFGAP1-223	ENST00000550188	NEB	P20929	6669 aa		4.89	□□□□□ -1.63
ARFGAP1-223	ENST00000550188	KRTAP12-1	P59990	96 aa		4.88	□□□□□ -1.63
ARFGAP1-223	ENST00000550188	MUC12	Q9UKN1	5478 aa		4.86	□□□□□ -1.63
ARFGAP1-223	ENST00000550188	KMT2D	O14686	5537 aa		4.82	□□□□□ -1.64
ARFGAP1-223	ENST00000550188	KRTAP8-1	Q8IUC2	63 aa		4.82	□□□□□ -1.64
ARFGAP1-223	ENST00000550188	SPRR2F	Q96RM1	72 aa		4.8	□□□□□ -1.64
ARFGAP1-223	ENST00000550188	CDC42SE1	Q9NRR8	79 aa		4.8	□□□□□ -1.64
ARFGAP1-223	ENST00000550188	KRTAP10-7	P60409	375 aa	Predicted RBP	4.78	□□□□□ -1.64
ARFGAP1-223	ENST00000550188	KRTAP10-12	P60413	245 aa		4.77	□□□□□ -1.65
ARFGAP1-223	ENST00000550188	MDN1	Q9NU22	5596 aa		4.76	□□□□□ -1.65

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