RNA–Protein interactions for RNA: ENST00000549490.1

UBE2N-203, Transcript of ubiquitin conjugating enzyme E2 N, humanhuman

TSL 2

Gene UBE2N, Length 676 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2N-203ENST00000549490 A0A087WVE0 104 aa3.55□□□□□ -1.84
UBE2N-203ENST00000549490 CXCL6P80162 114 aa3.55□□□□□ -1.84
UBE2N-203ENST00000549490 SPATA45Q537H7 98 aa3.55□□□□□ -1.84
UBE2N-203ENST00000549490 PAM16Q9Y3D7 125 aa3.55□□□□□ -1.84
UBE2N-203ENST00000549490 JMJD7-PLA2G4BH0Y9G9 81 aa3.54□□□□□ -1.84
UBE2N-203ENST00000549490 SCGB1C2P0DMR2 95 aa3.54□□□□□ -1.84
UBE2N-203ENST00000549490 PDE6GP18545 87 aa3.54□□□□□ -1.84
UBE2N-203ENST00000549490 KRTAP10-12P60413 245 aa3.54□□□□□ -1.84
UBE2N-203ENST00000549490 CASC2Q6XLA1 102 aa3.54□□□□□ -1.84
UBE2N-203ENST00000549490 H0YAA0 97 aa3.52□□□□□ -1.85
UBE2N-203ENST00000549490 KRTAP5-10Q6L8G5 202 aa3.52□□□□□ -1.85
UBE2N-203ENST00000549490 C14orf132Q9NPU4 83 aa3.52□□□□□ -1.85
UBE2N-203ENST00000549490 Q8N9L7 120 aa3.5□□□□□ -1.85
UBE2N-203ENST00000549490 KRTAP4-11Q9BYQ6 195 aa3.5□□□□□ -1.85
UBE2N-203ENST00000549490 BPY2O14599 106 aa3.49□□□□□ -1.85
UBE2N-203ENST00000549490 HSD52Q0P140 79 aa3.49□□□□□ -1.85
UBE2N-203ENST00000549490 ADM2Q7Z4H4 148 aa3.48□□□□□ -1.85
UBE2N-203ENST00000549490 VAMP8Q9BV40 100 aa3.48□□□□□ -1.85
UBE2N-203ENST00000549490 S100A6P06703 90 aa3.46□□□□□ -1.86
UBE2N-203ENST00000549490 MT4P47944 62 aa3.46□□□□□ -1.86
UBE2N-203ENST00000549490 ATXN8Q156A1 80 aa3.46□□□□□ -1.86
UBE2N-203ENST00000549490 LCE5AQ5TCM9 118 aa3.46□□□□□ -1.86
UBE2N-203ENST00000549490 KRTAP5-7Q6L8G8 165 aa3.44□□□□□ -1.86
UBE2N-203ENST00000549490 NDUFC1O43677 76 aa3.43□□□□□ -1.86
UBE2N-203ENST00000549490 LCE4AQ5TA78 99 aa3.43□□□□□ -1.86
UBE2N-203ENST00000549490 S100A1P23297 94 aa3.41□□□□□ -1.86
UBE2N-203ENST00000549490 R4GN34 69 aa3.41□□□□□ -1.86
UBE2N-203ENST00000549490 CYP4F30PQ9H0H9 118 aa3.39□□□□□ -1.87
UBE2N-203ENST00000549490 H3BS24 57 aa3.38□□□□□ -1.87
UBE2N-203ENST00000549490 KRTAP5-3Q6L8H2 238 aa3.38□□□□□ -1.87
UBE2N-203ENST00000549490 KRTAP19-3Q7Z4W3 81 aa3.38□□□□□ -1.87
UBE2N-203ENST00000549490 M0QZ58 72 aa3.37□□□□□ -1.87
UBE2N-203ENST00000549490 K7EP34 96 aa3.36□□□□□ -1.87
UBE2N-203ENST00000549490 P0C880 135 aa3.36□□□□□ -1.87
UBE2N-203ENST00000549490 LINC01554Q52M75 96 aa3.36□□□□□ -1.87
UBE2N-203ENST00000549490 NAA38Q9BRA0 125 aaKnown RBP3.36□□□□□ -1.87
UBE2N-203ENST00000549490 KRTAP19-7Q3SYF9 63 aa3.35□□□□□ -1.87
UBE2N-203ENST00000549490 TP53AIP1Q9HCN2 124 aa3.35□□□□□ -1.87
UBE2N-203ENST00000549490 MT1EP04732 61 aa3.34□□□□□ -1.87
UBE2N-203ENST00000549490 CYSTM1Q9H1C7 97 aa3.34□□□□□ -1.87
UBE2N-203ENST00000549490 SPRR5A0A1B0GTR4 108 aa3.33□□□□□ -1.88
UBE2N-203ENST00000549490 KRTAP5-4Q6L8H1 288 aa3.3□□□□□ -1.88
UBE2N-203ENST00000549490 C20orf197Q8N268 126 aa3.3□□□□□ -1.88
UBE2N-203ENST00000549490 UQCR10Q9UDW1 63 aa3.3□□□□□ -1.88
UBE2N-203ENST00000549490 LOC101927531A0A1B0GV80 90 aa3.28□□□□□ -1.88
UBE2N-203ENST00000549490 ACYP1P07311 99 aa3.28□□□□□ -1.88
UBE2N-203ENST00000549490 TRAV22A0A0B4J277 110 aa3.26□□□□□ -1.89
UBE2N-203ENST00000549490 MT1GP13640 62 aa3.26□□□□□ -1.89
UBE2N-203ENST00000549490 PYY3Q5JQD4 70 aa3.26□□□□□ -1.89
UBE2N-203ENST00000549490 TSTD3H0UI37 97 aa3.25□□□□□ -1.89
UBE2N-203ENST00000549490 H3BT86 120 aa3.25□□□□□ -1.89
UBE2N-203ENST00000549490 UBL5Q9BZL1 73 aa3.23□□□□□ -1.89
UBE2N-203ENST00000549490 BATFQ16520 125 aa3.22□□□□□ -1.89
UBE2N-203ENST00000549490 PP632Q6XCG6 107 aa3.21□□□□□ -1.9
UBE2N-203ENST00000549490 MT1MQ8N339 61 aa3.21□□□□□ -1.9
UBE2N-203ENST00000549490 KRTAP19-4Q3LI73 84 aa3.19□□□□□ -1.9
UBE2N-203ENST00000549490 M0R143 59 aa3.18□□□□□ -1.9
UBE2N-203ENST00000549490 MT-ATP8P03928 68 aa3.18□□□□□ -1.9
UBE2N-203ENST00000549490 SPCS1Q9Y6A9 102 aa3.18□□□□□ -1.9
UBE2N-203ENST00000549490 KRTAP4-3Q9BYR4 195 aa3.17□□□□□ -1.9
UBE2N-203ENST00000549490 KRTAP19-5Q3LI72 72 aa3.15□□□□□ -1.91
UBE2N-203ENST00000549490 AHNAKQ09666 5890 aaKnown RBP3.14□□□□□ -1.91
UBE2N-203ENST00000549490 A0A1W2PPM0 123 aa3.14□□□□□ -1.91
UBE2N-203ENST00000549490 H0Y9P7 68 aa3.14□□□□□ -1.91
UBE2N-203ENST00000549490 KRTAP20-2Q3LI61 65 aa3.14□□□□□ -1.91
UBE2N-203ENST00000549490 ATOX1O00244 68 aa3.12□□□□□ -1.91
UBE2N-203ENST00000549490 SVIPQ8NHG7 77 aa3.12□□□□□ -1.91
UBE2N-203ENST00000549490 MT1LQ93083 61 aa3.12□□□□□ -1.91
UBE2N-203ENST00000549490 UQCRQO14949 82 aa3.1□□□□□ -1.91
UBE2N-203ENST00000549490 C9orf118A6NHY6 69 aa3.08□□□□□ -1.92
UBE2N-203ENST00000549490 TAX1BP3O14907 124 aa3.07□□□□□ -1.92
UBE2N-203ENST00000549490 CAMK2N1Q7Z7J9 78 aa3.07□□□□□ -1.92
UBE2N-203ENST00000549490 A0A0D9SG42 100 aa3.06□□□□□ -1.92
UBE2N-203ENST00000549490 MUC5BQ9HC84 5762 aaPredicted RBP3.06□□□□□ -1.92
UBE2N-203ENST00000549490 MUC5ACP98088 5654 aa3.06□□□□□ -1.92
UBE2N-203ENST00000549490 LINC00208Q96KT6 92 aa3.05□□□□□ -1.92
UBE2N-203ENST00000549490 DMAC1Q96GE9 116 aa3.02□□□□□ -1.93
UBE2N-203ENST00000549490 KRTAP12-4P60329 112 aa3□□□□□ -1.93
UBE2N-203ENST00000549490 PRO0461Q9UI25 63 aa3□□□□□ -1.93
UBE2N-203ENST00000549490 SYNE1Q8NF91 8797 aaKnown RBP3□□□□□ -1.93
UBE2N-203ENST00000549490 KRTAP5-5Q701N2 237 aaPredicted RBP2.98□□□□□ -1.93
UBE2N-203ENST00000549490 KRTAP13-4Q3LI77 160 aa2.97□□□□□ -1.93
UBE2N-203ENST00000549490 MP68P56378 58 aa2.94□□□□□ -1.94
UBE2N-203ENST00000549490 HIST1H4AP62805 103 aaKnown RBP2.94□□□□□ -1.94
UBE2N-203ENST00000549490 TRAV7A0A075B6U4 112 aa2.93□□□□□ -1.94
UBE2N-203ENST00000549490 C10orf95Q9H7T3 257 aa2.91□□□□□ -1.94
UBE2N-203ENST00000549490 KRTAP5-8O75690 187 aa2.9□□□□□ -1.95
UBE2N-203ENST00000549490 SPTSSBQ8NFR3 76 aa2.89□□□□□ -1.95
UBE2N-203ENST00000549490 OCR1Q9BZK8 76 aa2.89□□□□□ -1.95
UBE2N-203ENST00000549490 LCE3AQ5TA76 89 aa2.87□□□□□ -1.95
UBE2N-203ENST00000549490 ATP5EP2Q5VTU8 51 aa2.87□□□□□ -1.95
UBE2N-203ENST00000549490 ACYP2P14621 99 aa2.85□□□□□ -1.95
UBE2N-203ENST00000549490 ETDBQ3ZM63 59 aa2.85□□□□□ -1.95
UBE2N-203ENST00000549490 H3BPC8 53 aa2.84□□□□□ -1.95
UBE2N-203ENST00000549490 KRTAP23-1A1A580 65 aa2.82□□□□□ -1.96
UBE2N-203ENST00000549490 KRTAP5-2Q701N4 177 aa2.82□□□□□ -1.96
UBE2N-203ENST00000549490 SMIM6P0DI80 62 aa2.81□□□□□ -1.96
UBE2N-203ENST00000549490 SPINT4Q6UDR6 99 aa2.8□□□□□ -1.96
UBE2N-203ENST00000549490 F8W1H4 67 aa2.79□□□□□ -1.96
UBE2N-203ENST00000549490 CHKB-CPT1BH3BT56 60 aa2.79□□□□□ -1.96
Retrieved 100 of 20,778 RNA–protein pairs in 159.5 ms