RNA–Protein interactions for RNA: ENST00000549128.5

CHPT1-204, Transcript of choline phosphotransferase 1, humanhuman

TSL 5

Gene CHPT1, Length 1,552 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHPT1-204ENST00000549128 DMAC1Q96GE9 116 aa12.53□□□□□ -0.4
CHPT1-204ENST00000549128 MT1FP04733 61 aa12.47□□□□□ -0.41
CHPT1-204ENST00000549128 CSAG1Q6PB30 78 aa12.47□□□□□ -0.41
CHPT1-204ENST00000549128 CCDC179H3BU77 68 aa12.44□□□□□ -0.42
CHPT1-204ENST00000549128 H7BZZ5 65 aa12.38□□□□□ -0.43
CHPT1-204ENST00000549128 KRTAP10-10P60014 251 aa12.38□□□□□ -0.43
CHPT1-204ENST00000549128 SPANXA2-OT1Q8N9U9 137 aa12.38□□□□□ -0.43
CHPT1-204ENST00000549128 NDUFC1O43677 76 aa12.37□□□□□ -0.43
CHPT1-204ENST00000549128 LCE2DQ5TA82 110 aaPredicted RBP12.35□□□□□ -0.43
CHPT1-204ENST00000549128 KRTAP9-2Q9BYQ4 174 aa12.35□□□□□ -0.43
CHPT1-204ENST00000549128 ACYP2P14621 99 aa12.33□□□□□ -0.44
CHPT1-204ENST00000549128 KRTAP9-3Q9BYQ3 159 aa12.24□□□□□ -0.45
CHPT1-204ENST00000549128 CHKB-CPT1BH3BT56 60 aa12.09□□□□□ -0.47
CHPT1-204ENST00000549128 H0YAA0 97 aa12.06□□□□□ -0.48
CHPT1-204ENST00000549128 LCE2BO14633 110 aa12.05□□□□□ -0.48
CHPT1-204ENST00000549128 COA5Q86WW8 74 aa12.05□□□□□ -0.48
CHPT1-204ENST00000549128 ADM2Q7Z4H4 148 aa12.02□□□□□ -0.49
CHPT1-204ENST00000549128 FSIP2Q5CZC0 6907 aa12.01□□□□□ -0.49
CHPT1-204ENST00000549128 SPTSSBQ8NFR3 76 aa11.98□□□□□ -0.49
CHPT1-204ENST00000549128 USH2AO75445 5202 aa11.98□□□□□ -0.49
CHPT1-204ENST00000549128 KRTAP19-1Q8IUB9 90 aa11.94□□□□□ -0.5
CHPT1-204ENST00000549128 TMEM258P61165 79 aa11.92□□□□□ -0.5
CHPT1-204ENST00000549128 KRTAP3-2Q9BYR7 98 aa11.91□□□□□ -0.5
CHPT1-204ENST00000549128 PCP4P48539 62 aa11.89□□□□□ -0.51
CHPT1-204ENST00000549128 ATP5EP56381 51 aaPredicted RBP11.89□□□□□ -0.51
CHPT1-204ENST00000549128 P0C880 135 aa11.88□□□□□ -0.51
CHPT1-204ENST00000549128 SPRR2GQ9BYE4 73 aa11.84□□□□□ -0.51
CHPT1-204ENST00000549128 CRIPTQ9P021 101 aa11.82□□□□□ -0.52
CHPT1-204ENST00000549128 CRCT1Q9UGL9 99 aa11.77□□□□□ -0.53
CHPT1-204ENST00000549128 SSPOA2VEC9 5147 aa11.76□□□□□ -0.53
CHPT1-204ENST00000549128 KRTAP9-6A0A140TA67 174 aa11.68□□□□□ -0.54
CHPT1-204ENST00000549128 KRTAP19-8Q3LI54 63 aa11.67□□□□□ -0.54
CHPT1-204ENST00000549128 R4GN34 69 aa11.63□□□□□ -0.55
CHPT1-204ENST00000549128 MT1BP07438 61 aa11.62□□□□□ -0.55
CHPT1-204ENST00000549128 M0QZ58 72 aa11.59□□□□□ -0.55
CHPT1-204ENST00000549128 Q5VV11 94 aa11.57□□□□□ -0.56
CHPT1-204ENST00000549128 SERP1Q9Y6X1 66 aa11.54□□□□□ -0.56
CHPT1-204ENST00000549128 SEC61GP60059 68 aa11.48□□□□□ -0.57
CHPT1-204ENST00000549128 KRTAP19-6Q3LI70 58 aa11.45□□□□□ -0.58
CHPT1-204ENST00000549128 LINC01554Q52M75 96 aa11.41□□□□□ -0.58
CHPT1-204ENST00000549128 KRTAP13-4Q3LI77 160 aa11.4□□□□□ -0.58
CHPT1-204ENST00000549128 A0A1B0GU69 56 aa11.38□□□□□ -0.59
CHPT1-204ENST00000549128 FCGBPQ9Y6R7 5405 aaPredicted RBP11.35□□□□□ -0.59
CHPT1-204ENST00000549128 LINC01558Q9Y6Z2 57 aa11.32□□□□□ -0.6
CHPT1-204ENST00000549128 A0A1B0GU33 70 aa11.28□□□□□ -0.6
CHPT1-204ENST00000549128 PLAC4Q8WY50 150 aa11.24□□□□□ -0.61
CHPT1-204ENST00000549128 SPATA8Q6RVD6 105 aa11.22□□□□□ -0.61
CHPT1-204ENST00000549128 PRR15LQ9BU68 103 aa11.18□□□□□ -0.62
CHPT1-204ENST00000549128 KRTAP10-5P60370 271 aa11.17□□□□□ -0.62
CHPT1-204ENST00000549128 A6NN06 94 aa11.16□□□□□ -0.62
CHPT1-204ENST00000549128 RPS28P62857 69 aaKnown RBP11.14□□□□□ -0.63
CHPT1-204ENST00000549128 SMIM26A0A096LP01 95 aa11.11□□□□□ -0.63
CHPT1-204ENST00000549128 A0A0D9SG42 100 aa11.08□□□□□ -0.64
CHPT1-204ENST00000549128 Q1T7F1 81 aa11.08□□□□□ -0.64
CHPT1-204ENST00000549128 MT1XP80297 61 aa11.06□□□□□ -0.64
CHPT1-204ENST00000549128 V9GYY9 64 aa11.03□□□□□ -0.64
CHPT1-204ENST00000549128 PSPHP1O15172 72 aa11.01□□□□□ -0.65
CHPT1-204ENST00000549128 A8MU10 97 aa10.96□□□□□ -0.65
CHPT1-204ENST00000549128 KRTAP9-1A8MXZ3 250 aaPredicted RBP10.94□□□□□ -0.66
CHPT1-204ENST00000549128 MACF1Q9UPN3 7388 aaKnown RBP10.92□□□□□ -0.66
CHPT1-204ENST00000549128 PRO2289Q9P1D8 64 aa10.92□□□□□ -0.66
CHPT1-204ENST00000549128 KRTAP12-1P59990 96 aa10.88□□□□□ -0.67
CHPT1-204ENST00000549128 UQCR11O14957 56 aa10.86□□□□□ -0.67
CHPT1-204ENST00000549128 SPINT4Q6UDR6 99 aa10.86□□□□□ -0.67
CHPT1-204ENST00000549128 KRTAP12-2P59991 146 aa10.83□□□□□ -0.68
CHPT1-204ENST00000549128 CAMK2N1Q7Z7J9 78 aa10.79□□□□□ -0.68
CHPT1-204ENST00000549128 MIR22HGQ0VDD5 57 aa10.72□□□□□ -0.69
CHPT1-204ENST00000549128 SYNE2Q8WXH0 6885 aaKnown RBP10.69□□□□□ -0.7
CHPT1-204ENST00000549128 A6NED7 52 aa10.63□□□□□ -0.71
CHPT1-204ENST00000549128 KRTAP9-7A8MTY7 169 aa10.6□□□□□ -0.71
CHPT1-204ENST00000549128 KRTAP10-7P60409 375 aaPredicted RBP10.59□□□□□ -0.71
CHPT1-204ENST00000549128 KMT2DO14686 5537 aa10.53□□□□□ -0.72
CHPT1-204ENST00000549128 KRTAP10-12P60413 245 aa10.48□□□□□ -0.73
CHPT1-204ENST00000549128 KRTAP4-8A0A0G2JLE6 195 aa10.42□□□□□ -0.74
CHPT1-204ENST00000549128 KRTAP6-3Q3LI67 103 aa10.42□□□□□ -0.74
CHPT1-204ENST00000549128 KRTAP4-8Q9BYQ9 185 aa10.42□□□□□ -0.74
CHPT1-204ENST00000549128 C10orf95Q9H7T3 257 aa10.36□□□□□ -0.75
CHPT1-204ENST00000549128 CDC42SE1Q9NRR8 79 aa10.31□□□□□ -0.76
CHPT1-204ENST00000549128 K7ERS5 55 aa10.27□□□□□ -0.76
CHPT1-204ENST00000549128 KRTAP8-1Q8IUC2 63 aa10.27□□□□□ -0.76
CHPT1-204ENST00000549128 KRTAP5-9P26371 169 aa10.24□□□□□ -0.77
CHPT1-204ENST00000549128 MUC12Q9UKN1 5478 aa10.13□□□□□ -0.79
CHPT1-204ENST00000549128 TNP1P09430 55 aa10.12□□□□□ -0.79
CHPT1-204ENST00000549128 SPRR2FQ96RM1 72 aa10.12□□□□□ -0.79
CHPT1-204ENST00000549128 BRK1Q8WUW1 75 aa10□□□□□ -0.81
CHPT1-204ENST00000549128 MDN1Q9NU22 5596 aa9.95□□□□□ -0.82
CHPT1-204ENST00000549128 LCE3AQ5TA76 89 aa9.92□□□□□ -0.82
CHPT1-204ENST00000549128 NEBP20929 6669 aa9.9□□□□□ -0.83
CHPT1-204ENST00000549128 KRTAP19-7Q3SYF9 63 aa9.88□□□□□ -0.83
CHPT1-204ENST00000549128 KRTAP25-1Q3LHN0 102 aa9.86□□□□□ -0.83
CHPT1-204ENST00000549128 ROMO1P60602 79 aa9.81□□□□□ -0.84
CHPT1-204ENST00000549128 KRTAP19-5Q3LI72 72 aa9.8□□□□□ -0.84
CHPT1-204ENST00000549128 SPRR2EP22531 72 aa9.79□□□□□ -0.84
CHPT1-204ENST00000549128 SPRR2BP35325 72 aa9.79□□□□□ -0.84
CHPT1-204ENST00000549128 SPRR2AP35326 72 aa9.79□□□□□ -0.84
CHPT1-204ENST00000549128 LCE1AQ5T7P2 110 aa9.79□□□□□ -0.84
CHPT1-204ENST00000549128 MT1EP04732 61 aa9.74□□□□□ -0.85
CHPT1-204ENST00000549128 KRTAP12-3P60328 96 aa9.51□□□□□ -0.89
CHPT1-204ENST00000549128 KRTAP23-1A1A580 65 aa9.5□□□□□ -0.89
CHPT1-204ENST00000549128 KRTAP19-3Q7Z4W3 81 aa9.5□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 7.7 ms