RNA–Protein interactions for RNA: ENST00000548080.5

HDAC7-227, Transcript of histone deacetylase 7, humanhuman

TSL 5

Gene HDAC7, Length 1,479 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC7-227ENST00000548080 SERP1Q9Y6X1 66 aa8.72□□□□□ -1.01
HDAC7-227ENST00000548080 M0R2T5 61 aa8.7□□□□□ -1.02
HDAC7-227ENST00000548080 COA5Q86WW8 74 aa8.69□□□□□ -1.02
HDAC7-227ENST00000548080 RPS28P62857 69 aaKnown RBP8.64□□□□□ -1.03
HDAC7-227ENST00000548080 H1FX-AS1Q4G0G2 97 aa8.64□□□□□ -1.03
HDAC7-227ENST00000548080 KRTAP10-6P60371 365 aaPredicted RBP8.62□□□□□ -1.03
HDAC7-227ENST00000548080 CHKB-CPT1BH3BT56 60 aa8.61□□□□□ -1.03
HDAC7-227ENST00000548080 LORP23490 312 aaPredicted RBP8.57□□□□□ -1.04
HDAC7-227ENST00000548080 S4R3F8 94 aa8.52□□□□□ -1.05
HDAC7-227ENST00000548080 KRTAP9-2Q9BYQ4 174 aa8.51□□□□□ -1.05
HDAC7-227ENST00000548080 SMIM26A0A096LP01 95 aa8.48□□□□□ -1.05
HDAC7-227ENST00000548080 LCA10Q71F78 164 aa8.48□□□□□ -1.05
HDAC7-227ENST00000548080 SPTSSBQ8NFR3 76 aa8.48□□□□□ -1.05
HDAC7-227ENST00000548080 SVIPQ8NHG7 77 aa8.45□□□□□ -1.06
HDAC7-227ENST00000548080 KRTAP3-3Q9BYR6 98 aa8.45□□□□□ -1.06
HDAC7-227ENST00000548080 KRTAP9-8Q9BYQ0 159 aa8.39□□□□□ -1.07
HDAC7-227ENST00000548080 LCE2DQ5TA82 110 aaPredicted RBP8.38□□□□□ -1.07
HDAC7-227ENST00000548080 CSAG1Q6PB30 78 aa8.37□□□□□ -1.07
HDAC7-227ENST00000548080 Q1T7F1 81 aa8.33□□□□□ -1.08
HDAC7-227ENST00000548080 MT2AP02795 61 aa8.32□□□□□ -1.08
HDAC7-227ENST00000548080 V9GYY9 64 aa8.32□□□□□ -1.08
HDAC7-227ENST00000548080 LINC01558Q9Y6Z2 57 aa8.32□□□□□ -1.08
HDAC7-227ENST00000548080 MT1FP04733 61 aa8.27□□□□□ -1.09
HDAC7-227ENST00000548080 KRTAP10-10P60014 251 aa8.23□□□□□ -1.09
HDAC7-227ENST00000548080 A0A1B0GU69 56 aa8.21□□□□□ -1.09
HDAC7-227ENST00000548080 SEC61GP60059 68 aa8.21□□□□□ -1.09
HDAC7-227ENST00000548080 PRR15LQ9BU68 103 aa8.21□□□□□ -1.09
HDAC7-227ENST00000548080 PSPHP1O15172 72 aa8.18□□□□□ -1.1
HDAC7-227ENST00000548080 H0YAA0 97 aa8.16□□□□□ -1.1
HDAC7-227ENST00000548080 ADM2Q7Z4H4 148 aa8.14□□□□□ -1.11
HDAC7-227ENST00000548080 KRTAP3-2Q9BYR7 98 aa8.13□□□□□ -1.11
HDAC7-227ENST00000548080 KRTAP9-6A0A140TA67 174 aa8.12□□□□□ -1.11
HDAC7-227ENST00000548080 Q5VV11 94 aa8.12□□□□□ -1.11
HDAC7-227ENST00000548080 KRTAP9-3Q9BYQ3 159 aa8.11□□□□□ -1.11
HDAC7-227ENST00000548080 FSIP2Q5CZC0 6907 aa8.09□□□□□ -1.11
HDAC7-227ENST00000548080 CRCT1Q9UGL9 99 aa8.07□□□□□ -1.12
HDAC7-227ENST00000548080 P0C880 135 aa8.06□□□□□ -1.12
HDAC7-227ENST00000548080 USH2AO75445 5202 aa8.05□□□□□ -1.12
HDAC7-227ENST00000548080 LCE2BO14633 110 aa8.05□□□□□ -1.12
HDAC7-227ENST00000548080 A0A1B0GU33 70 aa8.01□□□□□ -1.13
HDAC7-227ENST00000548080 A6NED7 52 aa7.94□□□□□ -1.14
HDAC7-227ENST00000548080 UQCR11O14957 56 aa7.94□□□□□ -1.14
HDAC7-227ENST00000548080 SSPOA2VEC9 5147 aa7.91□□□□□ -1.14
HDAC7-227ENST00000548080 M0QZ58 72 aa7.87□□□□□ -1.15
HDAC7-227ENST00000548080 KRTAP13-4Q3LI77 160 aa7.86□□□□□ -1.15
HDAC7-227ENST00000548080 SPATA8Q6RVD6 105 aa7.86□□□□□ -1.15
HDAC7-227ENST00000548080 CRIPTQ9P021 101 aa7.86□□□□□ -1.15
HDAC7-227ENST00000548080 MIR22HGQ0VDD5 57 aa7.85□□□□□ -1.15
HDAC7-227ENST00000548080 R4GN34 69 aa7.85□□□□□ -1.15
HDAC7-227ENST00000548080 KRTAP19-1Q8IUB9 90 aa7.83□□□□□ -1.16
HDAC7-227ENST00000548080 CDC42SE1Q9NRR8 79 aa7.78□□□□□ -1.16
HDAC7-227ENST00000548080 BRK1Q8WUW1 75 aa7.75□□□□□ -1.17
HDAC7-227ENST00000548080 A8MU10 97 aa7.73□□□□□ -1.17
HDAC7-227ENST00000548080 SPRR2GQ9BYE4 73 aa7.73□□□□□ -1.17
HDAC7-227ENST00000548080 A0A0D9SG42 100 aa7.72□□□□□ -1.17
HDAC7-227ENST00000548080 FCGBPQ9Y6R7 5405 aaPredicted RBP7.7□□□□□ -1.18
HDAC7-227ENST00000548080 LINC01554Q52M75 96 aa7.69□□□□□ -1.18
HDAC7-227ENST00000548080 MT1BP07438 61 aa7.66□□□□□ -1.18
HDAC7-227ENST00000548080 KRTAP19-6Q3LI70 58 aa7.66□□□□□ -1.18
HDAC7-227ENST00000548080 KRTAP19-8Q3LI54 63 aa7.64□□□□□ -1.19
HDAC7-227ENST00000548080 A6NN06 94 aa7.56□□□□□ -1.2
HDAC7-227ENST00000548080 KRTAP12-1P59990 96 aa7.56□□□□□ -1.2
HDAC7-227ENST00000548080 SPINT4Q6UDR6 99 aa7.55□□□□□ -1.2
HDAC7-227ENST00000548080 K7ERS5 55 aa7.53□□□□□ -1.2
HDAC7-227ENST00000548080 KRTAP12-2P59991 146 aa7.53□□□□□ -1.2
HDAC7-227ENST00000548080 PRO0628Q9UI54 55 aa7.53□□□□□ -1.2
HDAC7-227ENST00000548080 KRTAP9-1A8MXZ3 250 aaPredicted RBP7.52□□□□□ -1.21
HDAC7-227ENST00000548080 PLAC4Q8WY50 150 aa7.44□□□□□ -1.22
HDAC7-227ENST00000548080 KRTAP10-5P60370 271 aa7.39□□□□□ -1.23
HDAC7-227ENST00000548080 CAMK2N1Q7Z7J9 78 aa7.35□□□□□ -1.23
HDAC7-227ENST00000548080 KRTAP9-7A8MTY7 169 aa7.34□□□□□ -1.23
HDAC7-227ENST00000548080 PMAIP1Q13794 54 aa7.34□□□□□ -1.23
HDAC7-227ENST00000548080 MACF1Q9UPN3 7388 aaKnown RBP7.3□□□□□ -1.24
HDAC7-227ENST00000548080 MT1XP80297 61 aa7.24□□□□□ -1.25
HDAC7-227ENST00000548080 ROMO1P60602 79 aa7.19□□□□□ -1.26
HDAC7-227ENST00000548080 SYNE2Q8WXH0 6885 aaKnown RBP7.19□□□□□ -1.26
HDAC7-227ENST00000548080 C10orf95Q9H7T3 257 aa7.17□□□□□ -1.26
HDAC7-227ENST00000548080 PRO2289Q9P1D8 64 aa7.17□□□□□ -1.26
HDAC7-227ENST00000548080 KRTAP6-3Q3LI67 103 aa7.08□□□□□ -1.28
HDAC7-227ENST00000548080 KMT2DO14686 5537 aa7.01□□□□□ -1.29
HDAC7-227ENST00000548080 KTN1-AS1Q86SY8 53 aa6.98□□□□□ -1.29
HDAC7-227ENST00000548080 TNP1P09430 55 aa6.98□□□□□ -1.29
HDAC7-227ENST00000548080 KRTAP25-1Q3LHN0 102 aa6.98□□□□□ -1.29
HDAC7-227ENST00000548080 KRTAP10-7P60409 375 aaPredicted RBP6.95□□□□□ -1.3
HDAC7-227ENST00000548080 KRTAP4-8A0A0G2JLE6 195 aa6.88□□□□□ -1.31
HDAC7-227ENST00000548080 KRTAP4-8Q9BYQ9 185 aa6.88□□□□□ -1.31
HDAC7-227ENST00000548080 PRAC1Q96KF2 57 aa6.87□□□□□ -1.31
HDAC7-227ENST00000548080 MUC12Q9UKN1 5478 aa6.86□□□□□ -1.31
HDAC7-227ENST00000548080 KRTAP5-9P26371 169 aa6.86□□□□□ -1.31
HDAC7-227ENST00000548080 KRTAP10-12P60413 245 aa6.85□□□□□ -1.31
HDAC7-227ENST00000548080 KRTAP8-1Q8IUC2 63 aa6.85□□□□□ -1.31
HDAC7-227ENST00000548080 SPRR2FQ96RM1 72 aa6.8□□□□□ -1.32
HDAC7-227ENST00000548080 MDN1Q9NU22 5596 aa6.75□□□□□ -1.33
HDAC7-227ENST00000548080 KRTAP23-1A1A580 65 aa6.74□□□□□ -1.33
HDAC7-227ENST00000548080 NEBP20929 6669 aa6.72□□□□□ -1.33
HDAC7-227ENST00000548080 PP632Q6XCG6 107 aa6.72□□□□□ -1.33
HDAC7-227ENST00000548080 LCE3AQ5TA76 89 aa6.69□□□□□ -1.34
HDAC7-227ENST00000548080 SPRR2EP22531 72 aa6.63□□□□□ -1.35
HDAC7-227ENST00000548080 SPRR2BP35325 72 aa6.63□□□□□ -1.35
HDAC7-227ENST00000548080 SPRR2AP35326 72 aa6.63□□□□□ -1.35
Retrieved 100 of 20,778 RNA–protein pairs in 76.9 ms