RNA–Protein interactions for RNA: ENST00000547318.5

LETMD1-209, Transcript of LETM1 domain containing 1, humanhuman

TSL 1 (best)

Gene LETMD1, Length 2,001 nt, Biotype nonsense mediated decay.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LETMD1-209ENST00000547318 KRTAP10-6P60371 365 aaPredicted RBP7.44□□□□□ -1.22
LETMD1-209ENST00000547318 FAT3Q8TDW7 4589 aa7.44□□□□□ -1.22
LETMD1-209ENST00000547318 RYR2Q92736 4967 aa7.43□□□□□ -1.22
LETMD1-209ENST00000547318 KRTAP25-1Q3LHN0 102 aa7.42□□□□□ -1.22
LETMD1-209ENST00000547318 TNXBP22105 4242 aa7.41□□□□□ -1.22
LETMD1-209ENST00000547318 MT1HL1P0DM35 61 aa7.39□□□□□ -1.23
LETMD1-209ENST00000547318 TPRXLQ17RH7 258 aa7.39□□□□□ -1.23
LETMD1-209ENST00000547318 KRTAP3-2Q9BYR7 98 aa7.39□□□□□ -1.23
LETMD1-209ENST00000547318 ROMO1P60602 79 aa7.35□□□□□ -1.23
LETMD1-209ENST00000547318 HSPG2P98160 4391 aa7.31□□□□□ -1.24
LETMD1-209ENST00000547318 KRTAP13-4Q3LI77 160 aa7.28□□□□□ -1.24
LETMD1-209ENST00000547318 LRP1Q07954 4544 aaKnown RBP7.27□□□□□ -1.25
LETMD1-209ENST00000547318 P0C880 135 aa7.23□□□□□ -1.25
LETMD1-209ENST00000547318 M0QZ58 72 aa7.23□□□□□ -1.25
LETMD1-209ENST00000547318 KRTAP17-1Q9BYP8 105 aa7.22□□□□□ -1.25
LETMD1-209ENST00000547318 A0A0D9SG42 100 aa7.21□□□□□ -1.26
LETMD1-209ENST00000547318 KMT2CQ8NEZ4 4911 aaKnown RBP7.19□□□□□ -1.26
LETMD1-209ENST00000547318 DMBT1Q9UGM3 2413 aaPredicted RBP7.17□□□□□ -1.26
LETMD1-209ENST00000547318 RYR1P21817 5038 aa7.17□□□□□ -1.26
LETMD1-209ENST00000547318 SEC61BP60468 96 aaKnown RBP7.11□□□□□ -1.27
LETMD1-209ENST00000547318 KRTAP12-1P59990 96 aa7.1□□□□□ -1.27
LETMD1-209ENST00000547318 KRTAP12-2P59991 146 aa7.08□□□□□ -1.28
LETMD1-209ENST00000547318 CRIPTQ9P021 101 aa7.06□□□□□ -1.28
LETMD1-209ENST00000547318 SPINT4Q6UDR6 99 aa7.02□□□□□ -1.29
LETMD1-209ENST00000547318 MYCBP2O75592 4640 aa6.98□□□□□ -1.29
LETMD1-209ENST00000547318 RYR3Q15413 4870 aa6.95□□□□□ -1.3
LETMD1-209ENST00000547318 R4GN34 69 aa6.94□□□□□ -1.3
LETMD1-209ENST00000547318 KIAA1109Q2LD37 5005 aa6.92□□□□□ -1.3
LETMD1-209ENST00000547318 J3QL48 77 aa6.88□□□□□ -1.31
LETMD1-209ENST00000547318 KRTAP4-5Q9BYR2 181 aa6.88□□□□□ -1.31
LETMD1-209ENST00000547318 C10orf95Q9H7T3 257 aa6.86□□□□□ -1.31
LETMD1-209ENST00000547318 LRP2P98164 4655 aa6.85□□□□□ -1.31
LETMD1-209ENST00000547318 H3BS24 57 aa6.82□□□□□ -1.32
LETMD1-209ENST00000547318 LPAP08519 4548 aa6.79□□□□□ -1.32
LETMD1-209ENST00000547318 KRTAP4-1Q9BYQ7 146 aa6.77□□□□□ -1.33
LETMD1-209ENST00000547318 KRTAP19-2Q3LHN2 52 aa6.76□□□□□ -1.33
LETMD1-209ENST00000547318 KRTAP15-1Q3LI76 137 aa6.73□□□□□ -1.33
LETMD1-209ENST00000547318 MUC17Q685J3 4493 aa6.71□□□□□ -1.34
LETMD1-209ENST00000547318 LORP23490 312 aaPredicted RBP6.67□□□□□ -1.34
LETMD1-209ENST00000547318 EPPK1P58107 5090 aaKnown RBP6.67□□□□□ -1.34
LETMD1-209ENST00000547318 PP632Q6XCG6 107 aa6.65□□□□□ -1.35
LETMD1-209ENST00000547318 ABCA13Q86UQ4 5058 aa6.59□□□□□ -1.35
LETMD1-209ENST00000547318 CAMK2N1Q7Z7J9 78 aa6.58□□□□□ -1.36
LETMD1-209ENST00000547318 BIRC6Q9NR09 4857 aa6.52□□□□□ -1.37
LETMD1-209ENST00000547318 KRTAP23-1A1A580 65 aa6.49□□□□□ -1.37
LETMD1-209ENST00000547318 PLAC4Q8WY50 150 aa6.48□□□□□ -1.37
LETMD1-209ENST00000547318 NDUFAF8A1L188 74 aa6.47□□□□□ -1.37
LETMD1-209ENST00000547318 TNP1P09430 55 aa6.4□□□□□ -1.38
LETMD1-209ENST00000547318 HERC2O95714 4834 aa6.39□□□□□ -1.39
LETMD1-209ENST00000547318 FLGP20930 4061 aaPredicted RBP6.37□□□□□ -1.39
LETMD1-209ENST00000547318 SPRR2GQ9BYE4 73 aa6.35□□□□□ -1.39
LETMD1-209ENST00000547318 LCE2CQ5TA81 110 aa6.32□□□□□ -1.4
LETMD1-209ENST00000547318 A0A0A0MQY5 61 aa6.3□□□□□ -1.4
LETMD1-209ENST00000547318 HERC1Q15751 4861 aa6.28□□□□□ -1.4
LETMD1-209ENST00000547318 LUZP6Q538Z0 58 aa6.25□□□□□ -1.41
LETMD1-209ENST00000547318 KRTAP19-1Q8IUB9 90 aa6.2□□□□□ -1.42
LETMD1-209ENST00000547318 M0R2T5 61 aa6.18□□□□□ -1.42
LETMD1-209ENST00000547318 MT1HP80294 61 aa6.17□□□□□ -1.42
LETMD1-209ENST00000547318 PCLOQ9Y6V0 5065 aa6.16□□□□□ -1.42
LETMD1-209ENST00000547318 SPRR5A0A1B0GTR4 108 aa6.11□□□□□ -1.43
LETMD1-209ENST00000547318 HMCN2Q8NDA2 5059 aa6.09□□□□□ -1.43
LETMD1-209ENST00000547318 MT2AP02795 61 aa6.08□□□□□ -1.44
LETMD1-209ENST00000547318 KRTAP19-8Q3LI54 63 aa6.08□□□□□ -1.44
LETMD1-209ENST00000547318 KRTAP10-10P60014 251 aa6.07□□□□□ -1.44
LETMD1-209ENST00000547318 MT1FP04733 61 aa6.04□□□□□ -1.44
LETMD1-209ENST00000547318 KRTAP9-8Q9BYQ0 159 aa6.04□□□□□ -1.44
LETMD1-209ENST00000547318 MUC2Q02817 5179 aa6.02□□□□□ -1.45
LETMD1-209ENST00000547318 LCE3AQ5TA76 89 aa5.94□□□□□ -1.46
LETMD1-209ENST00000547318 KRTAP8-1Q8IUC2 63 aa5.92□□□□□ -1.46
LETMD1-209ENST00000547318 MT1BP07438 61 aa5.89□□□□□ -1.47
LETMD1-209ENST00000547318 KRTAP10-5P60370 271 aa5.85□□□□□ -1.47
LETMD1-209ENST00000547318 MT1XP80297 61 aa5.84□□□□□ -1.48
LETMD1-209ENST00000547318 PRO2289Q9P1D8 64 aa5.8□□□□□ -1.48
LETMD1-209ENST00000547318 KRTAP9-3Q9BYQ3 159 aa5.79□□□□□ -1.48
LETMD1-209ENST00000547318 KRTAP10-12P60413 245 aa5.78□□□□□ -1.48
LETMD1-209ENST00000547318 FAT4Q6V0I7 4981 aa5.77□□□□□ -1.49
LETMD1-209ENST00000547318 RNF213Q63HN8 5207 aa5.74□□□□□ -1.49
LETMD1-209ENST00000547318 KRTAP12-3P60328 96 aa5.72□□□□□ -1.49
LETMD1-209ENST00000547318 KRTAP10-7P60409 375 aaPredicted RBP5.61□□□□□ -1.51
LETMD1-209ENST00000547318 UBR4Q5T4S7 5183 aa5.6□□□□□ -1.51
LETMD1-209ENST00000547318 LCE2BO14633 110 aa5.49□□□□□ -1.53
LETMD1-209ENST00000547318 INE1O15225 51 aa5.47□□□□□ -1.53
LETMD1-209ENST00000547318 LCE2AQ5TA79 106 aaPredicted RBP5.47□□□□□ -1.53
LETMD1-209ENST00000547318 KRTAP19-4Q3LI73 84 aa5.44□□□□□ -1.54
LETMD1-209ENST00000547318 KRTAP19-5Q3LI72 72 aa5.41□□□□□ -1.54
LETMD1-209ENST00000547318 LCE3CQ5T5A8 94 aa5.39□□□□□ -1.55
LETMD1-209ENST00000547318 KRTAP19-7Q3SYF9 63 aa5.2□□□□□ -1.58
LETMD1-209ENST00000547318 KRTAP4-8A0A0G2JLE6 195 aa5.18□□□□□ -1.58
LETMD1-209ENST00000547318 KRTAP4-8Q9BYQ9 185 aa5.18□□□□□ -1.58
LETMD1-209ENST00000547318 MT1EP04732 61 aa5.08□□□□□ -1.6
LETMD1-209ENST00000547318 MT1LQ93083 61 aa5.08□□□□□ -1.6
LETMD1-209ENST00000547318 KRTAP19-6Q3LI70 58 aa5.07□□□□□ -1.6
LETMD1-209ENST00000547318 KRTAP9-6A8MVA2 160 aa5.06□□□□□ -1.6
LETMD1-209ENST00000547318 KRTAP9-2Q9BYQ4 174 aa5.05□□□□□ -1.6
LETMD1-209ENST00000547318 KRTAP2-3P0C7H8 128 aa5.04□□□□□ -1.6
LETMD1-209ENST00000547318 KRTAP2-4Q9BYR9 128 aa5.04□□□□□ -1.6
LETMD1-209ENST00000547318 KRTAP2-1Q9BYU5 128 aa5.04□□□□□ -1.6
LETMD1-209ENST00000547318 USH2AO75445 5202 aa4.96□□□□□ -1.62
LETMD1-209ENST00000547318 KRTAP9-6A0A140TA67 174 aa4.95□□□□□ -1.62
LETMD1-209ENST00000547318 LCE2DQ5TA82 110 aaPredicted RBP4.94□□□□□ -1.62
Retrieved 100 of 20,778 RNA–protein pairs in 425.5 ms