RNA–Protein interactions for RNA: ENST00000546361.6

CHERP-203, Transcript of calcium homeostasis endoplasmic reticulum protein, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CHERP, Length 4,173 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHERP-203ENST00000546361 MT1HL1P0DM35 61 aa5.86□□□□□ -1.47
CHERP-203ENST00000546361 PRO2289Q9P1D8 64 aa5.84□□□□□ -1.48
CHERP-203ENST00000546361 DNAH2Q9P225 4427 aa5.8□□□□□ -1.48
CHERP-203ENST00000546361 FRAS1Q86XX4 4008 aa5.8□□□□□ -1.48
CHERP-203ENST00000546361 C10orf95Q9H7T3 257 aa5.8□□□□□ -1.48
CHERP-203ENST00000546361 PP632Q6XCG6 107 aa5.8□□□□□ -1.48
CHERP-203ENST00000546361 KRTAP4-5Q9BYR2 181 aa5.8□□□□□ -1.48
CHERP-203ENST00000546361 DNAH6Q9C0G6 4158 aa5.76□□□□□ -1.49
CHERP-203ENST00000546361 KRTAP3-1Q9BYR8 98 aa5.75□□□□□ -1.49
CHERP-203ENST00000546361 DNAH5Q8TE73 4624 aa5.74□□□□□ -1.49
CHERP-203ENST00000546361 KRTAP10-4P60372 401 aaPredicted RBP5.73□□□□□ -1.49
CHERP-203ENST00000546361 HECTD4Q9Y4D8 3996 aa5.73□□□□□ -1.49
CHERP-203ENST00000546361 HYDINQ4G0P3 5121 aa5.72□□□□□ -1.49
CHERP-203ENST00000546361 LRP1BQ9NZR2 4599 aa5.71□□□□□ -1.49
CHERP-203ENST00000546361 DNAH8Q96JB1 4490 aa5.71□□□□□ -1.5
CHERP-203ENST00000546361 DYNC1H1Q14204 4646 aaKnown RBP5.69□□□□□ -1.5
CHERP-203ENST00000546361 SACSQ9NZJ4 4579 aa5.67□□□□□ -1.5
CHERP-203ENST00000546361 FAT1Q14517 4588 aa5.64□□□□□ -1.51
CHERP-203ENST00000546361 KRTAP12-2P59991 146 aa5.6□□□□□ -1.51
CHERP-203ENST00000546361 PKD1P98161 4303 aa5.58□□□□□ -1.52
CHERP-203ENST00000546361 FAT2Q9NYQ8 4349 aa5.58□□□□□ -1.52
CHERP-203ENST00000546361 VPS13BQ7Z7G8 4022 aa5.58□□□□□ -1.52
CHERP-203ENST00000546361 KIAA1109Q2LD37 5005 aa5.57□□□□□ -1.52
CHERP-203ENST00000546361 RYR2Q92736 4967 aa5.57□□□□□ -1.52
CHERP-203ENST00000546361 KRTAP12-1P59990 96 aa5.56□□□□□ -1.52
CHERP-203ENST00000546361 PKHD1P08F94 4074 aa5.56□□□□□ -1.52
CHERP-203ENST00000546361 KRTAP10-6P60371 365 aaPredicted RBP5.52□□□□□ -1.53
CHERP-203ENST00000546361 RYR3Q15413 4870 aa5.52□□□□□ -1.53
CHERP-203ENST00000546361 KMT2CQ8NEZ4 4911 aaKnown RBP5.51□□□□□ -1.53
CHERP-203ENST00000546361 BIRC6Q9NR09 4857 aa5.51□□□□□ -1.53
CHERP-203ENST00000546361 KRTAP13-4Q3LI77 160 aa5.48□□□□□ -1.53
CHERP-203ENST00000546361 APOBP04114 4563 aaKnown RBP5.47□□□□□ -1.53
CHERP-203ENST00000546361 RYR1P21817 5038 aa5.44□□□□□ -1.54
CHERP-203ENST00000546361 PKHD1L1Q86WI1 4243 aa5.43□□□□□ -1.54
CHERP-203ENST00000546361 KRTAP3-3Q9BYR6 98 aa5.4□□□□□ -1.55
CHERP-203ENST00000546361 KRTAP17-1Q9BYP8 105 aa5.36□□□□□ -1.55
CHERP-203ENST00000546361 LRP1Q07954 4544 aaKnown RBP5.35□□□□□ -1.55
CHERP-203ENST00000546361 KRTAP3-2Q9BYR7 98 aa5.35□□□□□ -1.55
CHERP-203ENST00000546361 HERC2O95714 4834 aa5.32□□□□□ -1.56
CHERP-203ENST00000546361 HSPG2P98160 4391 aa5.3□□□□□ -1.56
CHERP-203ENST00000546361 EPPK1P58107 5090 aaKnown RBP5.27□□□□□ -1.57
CHERP-203ENST00000546361 MYCBP2O75592 4640 aa5.25□□□□□ -1.57
CHERP-203ENST00000546361 FAT3Q8TDW7 4589 aa5.24□□□□□ -1.57
CHERP-203ENST00000546361 KRTAP15-1Q3LI76 137 aa5.21□□□□□ -1.57
CHERP-203ENST00000546361 KRTAP4-1Q9BYQ7 146 aa5.16□□□□□ -1.58
CHERP-203ENST00000546361 KRTAP10-12P60413 245 aa5.15□□□□□ -1.58
CHERP-203ENST00000546361 LORP23490 312 aaPredicted RBP5.15□□□□□ -1.59
CHERP-203ENST00000546361 TNXBP22105 4242 aa5.09□□□□□ -1.59
CHERP-203ENST00000546361 ABCA13Q86UQ4 5058 aa5.05□□□□□ -1.6
CHERP-203ENST00000546361 MT1HP80294 61 aa5.03□□□□□ -1.6
CHERP-203ENST00000546361 LRP2P98164 4655 aa5.01□□□□□ -1.61
CHERP-203ENST00000546361 PCLOQ9Y6V0 5065 aa5□□□□□ -1.61
CHERP-203ENST00000546361 KRTAP12-3P60328 96 aa4.99□□□□□ -1.61
CHERP-203ENST00000546361 CRCT1Q9UGL9 99 aa4.97□□□□□ -1.61
CHERP-203ENST00000546361 MT2AP02795 61 aa4.95□□□□□ -1.62
CHERP-203ENST00000546361 LPAP08519 4548 aa4.93□□□□□ -1.62
CHERP-203ENST00000546361 LCE3AQ5TA76 89 aa4.93□□□□□ -1.62
CHERP-203ENST00000546361 KRTAP8-1Q8IUC2 63 aa4.88□□□□□ -1.63
CHERP-203ENST00000546361 HERC1Q15751 4861 aa4.87□□□□□ -1.63
CHERP-203ENST00000546361 MT1FP04733 61 aa4.85□□□□□ -1.63
CHERP-203ENST00000546361 KRTAP23-1A1A580 65 aa4.85□□□□□ -1.63
CHERP-203ENST00000546361 SPRR2GQ9BYE4 73 aa4.83□□□□□ -1.64
CHERP-203ENST00000546361 INE1O15225 51 aa4.81□□□□□ -1.64
CHERP-203ENST00000546361 UBR4Q5T4S7 5183 aa4.63□□□□□ -1.67
CHERP-203ENST00000546361 HMCN2Q8NDA2 5059 aa4.62□□□□□ -1.67
CHERP-203ENST00000546361 KRTAP19-2Q3LHN2 52 aa4.62□□□□□ -1.67
CHERP-203ENST00000546361 KRTAP19-1Q8IUB9 90 aa4.61□□□□□ -1.67
CHERP-203ENST00000546361 SPRR2FQ96RM1 72 aa4.61□□□□□ -1.67
CHERP-203ENST00000546361 RNF213Q63HN8 5207 aa4.59□□□□□ -1.67
CHERP-203ENST00000546361 MUC2Q02817 5179 aa4.59□□□□□ -1.67
CHERP-203ENST00000546361 MUC17Q685J3 4493 aa4.57□□□□□ -1.68
CHERP-203ENST00000546361 LCE2CQ5TA81 110 aa4.56□□□□□ -1.68
CHERP-203ENST00000546361 KRTAP19-8Q3LI54 63 aa4.55□□□□□ -1.68
CHERP-203ENST00000546361 FLGP20930 4061 aaPredicted RBP4.52□□□□□ -1.69
CHERP-203ENST00000546361 KRTAP9-8Q9BYQ0 159 aa4.52□□□□□ -1.69
CHERP-203ENST00000546361 KRTAP19-5Q3LI72 72 aa4.51□□□□□ -1.69
CHERP-203ENST00000546361 KRTAP10-5P60370 271 aa4.51□□□□□ -1.69
CHERP-203ENST00000546361 KRTAP9-2Q9BYQ4 174 aa4.49□□□□□ -1.69
CHERP-203ENST00000546361 FAT4Q6V0I7 4981 aa4.45□□□□□ -1.7
CHERP-203ENST00000546361 KRTAP10-7P60409 375 aaPredicted RBP4.45□□□□□ -1.7
CHERP-203ENST00000546361 MT1BP07438 61 aa4.43□□□□□ -1.7
CHERP-203ENST00000546361 FSIP2Q5CZC0 6907 aa4.42□□□□□ -1.7
CHERP-203ENST00000546361 LCE2AQ5TA79 106 aaPredicted RBP4.42□□□□□ -1.7
CHERP-203ENST00000546361 KRTAP9-3Q9BYQ3 159 aa4.39□□□□□ -1.71
CHERP-203ENST00000546361 MT1XP80297 61 aa4.39□□□□□ -1.71
CHERP-203ENST00000546361 SYNE1Q8NF91 8797 aaKnown RBP4.39□□□□□ -1.71
CHERP-203ENST00000546361 LCE3CQ5T5A8 94 aa4.35□□□□□ -1.71
CHERP-203ENST00000546361 KRTAP9-6A0A140TA67 174 aa4.33□□□□□ -1.72
CHERP-203ENST00000546361 KRTAP19-4Q3LI73 84 aa4.3□□□□□ -1.72
CHERP-203ENST00000546361 SPRR2EP22531 72 aa4.29□□□□□ -1.72
CHERP-203ENST00000546361 SPRR2BP35325 72 aa4.29□□□□□ -1.72
CHERP-203ENST00000546361 SPRR2AP35326 72 aa4.29□□□□□ -1.72
CHERP-203ENST00000546361 KRTAP4-8A0A0G2JLE6 195 aa4.29□□□□□ -1.72
CHERP-203ENST00000546361 KRTAP4-8Q9BYQ9 185 aa4.29□□□□□ -1.72
CHERP-203ENST00000546361 LCE2DQ5TA82 110 aaPredicted RBP4.25□□□□□ -1.73
CHERP-203ENST00000546361 LCE2BO14633 110 aa4.25□□□□□ -1.73
CHERP-203ENST00000546361 MT1GP13640 62 aa4.15□□□□□ -1.75
CHERP-203ENST00000546361 SPRR2DP22532 72 aa4.14□□□□□ -1.75
CHERP-203ENST00000546361 SPRR5A0A1B0GTR4 108 aa4.13□□□□□ -1.75
CHERP-203ENST00000546361 KRTAP12-4P60329 112 aa4.02□□□□□ -1.77
Retrieved 100 of 20,778 RNA–protein pairs in 66.3 ms