RNA–Protein interactions for RNA: ENST00000545432.5

RTN3-214, Transcript of reticulon 3, humanhuman

TSL 4

Gene RTN3, Length 545 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN3-214ENST00000545432 CASC2Q6XLA1 102 aa6.19□□□□□ -1.42
RTN3-214ENST00000545432 C1orf64Q8NEQ6 169 aa6.19□□□□□ -1.42
RTN3-214ENST00000545432 PRO2289Q9P1D8 64 aa6.17□□□□□ -1.42
RTN3-214ENST00000545432 CXCL6P80162 114 aa6.16□□□□□ -1.42
RTN3-214ENST00000545432 HCG22E2RYF7 251 aa6.15□□□□□ -1.42
RTN3-214ENST00000545432 TAX1BP3O14907 124 aa6.15□□□□□ -1.42
RTN3-214ENST00000545432 LCE3BQ5TA77 95 aa6.14□□□□□ -1.43
RTN3-214ENST00000545432 Q8N9L7 120 aa6.14□□□□□ -1.43
RTN3-214ENST00000545432 UBL5Q9BZL1 73 aa6.11□□□□□ -1.43
RTN3-214ENST00000545432 SPCS1Q9Y6A9 102 aa6.11□□□□□ -1.43
RTN3-214ENST00000545432 KRTAP4-8A0A0G2JLE6 195 aa6.07□□□□□ -1.44
RTN3-214ENST00000545432 KRTAP4-8Q9BYQ9 185 aa6.07□□□□□ -1.44
RTN3-214ENST00000545432 H0YAA0 97 aa6.06□□□□□ -1.44
RTN3-214ENST00000545432 A0A087WVE0 104 aa6.01□□□□□ -1.45
RTN3-214ENST00000545432 TP53AIP1Q9HCN2 124 aa6.01□□□□□ -1.45
RTN3-214ENST00000545432 COL5A1-AS1Q5SY13 56 aa6□□□□□ -1.45
RTN3-214ENST00000545432 DSTQ03001 7570 aaKnown RBP5.99□□□□□ -1.45
RTN3-214ENST00000545432 LOC105371267A0A1B0GV96 52 aa5.98□□□□□ -1.45
RTN3-214ENST00000545432 A8MUN3 132 aa5.97□□□□□ -1.45
RTN3-214ENST00000545432 K7EP34 96 aa5.97□□□□□ -1.45
RTN3-214ENST00000545432 PRO0461Q9UI25 63 aa5.97□□□□□ -1.45
RTN3-214ENST00000545432 PLAC4Q8WY50 150 aa5.96□□□□□ -1.46
RTN3-214ENST00000545432 KRTAP3-2Q9BYR7 98 aa5.95□□□□□ -1.46
RTN3-214ENST00000545432 KRTAP10-12P60413 245 aa5.91□□□□□ -1.46
RTN3-214ENST00000545432 GTF2H5Q6ZYL4 71 aa5.91□□□□□ -1.46
RTN3-214ENST00000545432 CYP4F30PQ9H0H9 118 aa5.89□□□□□ -1.47
RTN3-214ENST00000545432 F8W1H4 67 aa5.88□□□□□ -1.47
RTN3-214ENST00000545432 KRTAP10-7P60409 375 aaPredicted RBP5.88□□□□□ -1.47
RTN3-214ENST00000545432 ADM2Q7Z4H4 148 aa5.86□□□□□ -1.47
RTN3-214ENST00000545432 TRAV22A0A0B4J277 110 aa5.85□□□□□ -1.47
RTN3-214ENST00000545432 LOC101927531A0A1B0GV80 90 aa5.85□□□□□ -1.47
RTN3-214ENST00000545432 NDUFC1O43677 76 aa5.85□□□□□ -1.47
RTN3-214ENST00000545432 ETDBQ3ZM63 59 aa5.84□□□□□ -1.47
RTN3-214ENST00000545432 KRTAP4-9Q9BYQ8 210 aa5.83□□□□□ -1.48
RTN3-214ENST00000545432 ACYP1P07311 99 aa5.79□□□□□ -1.48
RTN3-214ENST00000545432 ATP5EP2Q5VTU8 51 aa5.79□□□□□ -1.48
RTN3-214ENST00000545432 ATOX1O00244 68 aa5.78□□□□□ -1.48
RTN3-214ENST00000545432 UQCRQO14949 82 aa5.75□□□□□ -1.49
RTN3-214ENST00000545432 R4GN34 69 aa5.75□□□□□ -1.49
RTN3-214ENST00000545432 FAM240AA0A1B0GVK7 77 aa5.74□□□□□ -1.49
RTN3-214ENST00000545432 HIST1H4AP62805 103 aaKnown RBP5.74□□□□□ -1.49
RTN3-214ENST00000545432 H0Y9P7 68 aa5.73□□□□□ -1.49
RTN3-214ENST00000545432 LCE5AQ5TCM9 118 aa5.71□□□□□ -1.5
RTN3-214ENST00000545432 P0C880 135 aa5.7□□□□□ -1.5
RTN3-214ENST00000545432 PCP4L1A6NKN8 68 aa5.68□□□□□ -1.5
RTN3-214ENST00000545432 M0QZ58 72 aa5.67□□□□□ -1.5
RTN3-214ENST00000545432 LCE1DQ5T752 114 aa5.67□□□□□ -1.5
RTN3-214ENST00000545432 HMCN1Q96RW7 5635 aa5.67□□□□□ -1.5
RTN3-214ENST00000545432 C20orf197Q8N268 126 aa5.64□□□□□ -1.51
RTN3-214ENST00000545432 MP68P56378 58 aa5.62□□□□□ -1.51
RTN3-214ENST00000545432 LINC00208Q96KT6 92 aa5.62□□□□□ -1.51
RTN3-214ENST00000545432 AHNAK2Q8IVF2 5795 aa5.61□□□□□ -1.51
RTN3-214ENST00000545432 LINC00643Q86TS7 51 aa5.61□□□□□ -1.51
RTN3-214ENST00000545432 KRTAP5-10Q6L8G5 202 aa5.58□□□□□ -1.52
RTN3-214ENST00000545432 KRTAP19-3Q7Z4W3 81 aa5.58□□□□□ -1.52
RTN3-214ENST00000545432 KRTAP19-7Q3SYF9 63 aa5.57□□□□□ -1.52
RTN3-214ENST00000545432 LINC01554Q52M75 96 aa5.57□□□□□ -1.52
RTN3-214ENST00000545432 LCE4AQ5TA78 99 aa5.56□□□□□ -1.52
RTN3-214ENST00000545432 OCR1Q9BZK8 76 aa5.54□□□□□ -1.52
RTN3-214ENST00000545432 MT1EP04732 61 aa5.52□□□□□ -1.53
RTN3-214ENST00000545432 H3BPC8 53 aa5.51□□□□□ -1.53
RTN3-214ENST00000545432 MT4P47944 62 aa5.47□□□□□ -1.53
RTN3-214ENST00000545432 DMAC1Q96GE9 116 aa5.47□□□□□ -1.53
RTN3-214ENST00000545432 KRTAP5-7Q6L8G8 165 aa5.45□□□□□ -1.54
RTN3-214ENST00000545432 CYSTM1Q9H1C7 97 aa5.45□□□□□ -1.54
RTN3-214ENST00000545432 SCGB1A1P11684 91 aa5.43□□□□□ -1.54
RTN3-214ENST00000545432 J3QR89 54 aa5.42□□□□□ -1.54
RTN3-214ENST00000545432 KRTAP5-4Q6L8H1 288 aa5.42□□□□□ -1.54
RTN3-214ENST00000545432 MT1GP13640 62 aa5.41□□□□□ -1.54
RTN3-214ENST00000545432 TRAV7A0A075B6U4 112 aa5.38□□□□□ -1.55
RTN3-214ENST00000545432 MT-ATP8P03928 68 aa5.35□□□□□ -1.55
RTN3-214ENST00000545432 SPTSSBQ8NFR3 76 aa5.35□□□□□ -1.55
RTN3-214ENST00000545432 KRTAP4-6Q9BYQ5 205 aa5.35□□□□□ -1.55
RTN3-214ENST00000545432 A0A1B0GV90 55 aa5.34□□□□□ -1.55
RTN3-214ENST00000545432 ACYP2P14621 99 aa5.33□□□□□ -1.56
RTN3-214ENST00000545432 KRTAP5-3Q6L8H2 238 aa5.31□□□□□ -1.56
RTN3-214ENST00000545432 PP632Q6XCG6 107 aa5.3□□□□□ -1.56
RTN3-214ENST00000545432 MT1MQ8N339 61 aa5.29□□□□□ -1.56
RTN3-214ENST00000545432 SMIM20Q8N5G0 67 aa5.28□□□□□ -1.56
RTN3-214ENST00000545432 CHKB-CPT1BH3BT56 60 aa5.26□□□□□ -1.57
RTN3-214ENST00000545432 KRTAP19-5Q3LI72 72 aa5.23□□□□□ -1.57
RTN3-214ENST00000545432 MT1LQ93083 61 aa5.19□□□□□ -1.58
RTN3-214ENST00000545432 CAMK2N1Q7Z7J9 78 aa5.16□□□□□ -1.58
RTN3-214ENST00000545432 KRTAP4-3Q9BYR4 195 aa5.15□□□□□ -1.59
RTN3-214ENST00000545432 A0A0D9SG42 100 aa5.13□□□□□ -1.59
RTN3-214ENST00000545432 K7ERU9 68 aa5.13□□□□□ -1.59
RTN3-214ENST00000545432 KRTAP13-4Q3LI77 160 aa5.13□□□□□ -1.59
RTN3-214ENST00000545432 SPANXA2-OT1Q8N9U9 137 aa5.11□□□□□ -1.59
RTN3-214ENST00000545432 SNURFQ9Y675 71 aa5.1□□□□□ -1.59
RTN3-214ENST00000545432 KRTAP20-2Q3LI61 65 aa5.09□□□□□ -1.59
RTN3-214ENST00000545432 SPRR5A0A1B0GTR4 108 aa5.07□□□□□ -1.6
RTN3-214ENST00000545432 SERP2Q8N6R1 65 aa5□□□□□ -1.61
RTN3-214ENST00000545432 SEC61GP60059 68 aa4.99□□□□□ -1.61
RTN3-214ENST00000545432 KRTAP5-5Q701N2 237 aaPredicted RBP4.96□□□□□ -1.62
RTN3-214ENST00000545432 SERP1Q9Y6X1 66 aa4.96□□□□□ -1.62
RTN3-214ENST00000545432 COA5Q86WW8 74 aa4.95□□□□□ -1.62
RTN3-214ENST00000545432 C10orf95Q9H7T3 257 aa4.89□□□□□ -1.63
RTN3-214ENST00000545432 SYNE1Q8NF91 8797 aaKnown RBP4.88□□□□□ -1.63
RTN3-214ENST00000545432 KRTAP4-7Q9BYR0 210 aa4.88□□□□□ -1.63
RTN3-214ENST00000545432 KRTAP12-4P60329 112 aa4.87□□□□□ -1.63
Retrieved 100 of 20,778 RNA–protein pairs in 14.7 ms