RNA–Protein interactions for RNA: ENST00000544610.1

CDCA3-209, Transcript of cell division cycle associated 3, humanhuman

TSL 3

Gene CDCA3, Length 624 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDCA3-209ENST00000544610 IGKV2D-30A0A075B6S6 120 aa3.52□□□□□ -1.85
CDCA3-209ENST00000544610 TRAV22A0A0B4J277 110 aa3.52□□□□□ -1.85
CDCA3-209ENST00000544610 RPL37P61927 97 aaKnown RBP3.52□□□□□ -1.85
CDCA3-209ENST00000544610 MT1HP80294 61 aa3.52□□□□□ -1.85
CDCA3-209ENST00000544610 COX7CP15954 63 aa3.5□□□□□ -1.85
CDCA3-209ENST00000544610 MP68P56378 58 aa3.5□□□□□ -1.85
CDCA3-209ENST00000544610 ZCCHC13Q8WW36 166 aaKnown RBP3.5□□□□□ -1.85
CDCA3-209ENST00000544610 ANAPC13Q9BS18 74 aa3.5□□□□□ -1.85
CDCA3-209ENST00000544610 LOC101927531A0A1B0GV80 90 aa3.49□□□□□ -1.85
CDCA3-209ENST00000544610 C9orf92A6NGG3 77 aa3.49□□□□□ -1.85
CDCA3-209ENST00000544610 NDUFS5O43920 106 aa3.49□□□□□ -1.85
CDCA3-209ENST00000544610 KRTAP10-7P60409 375 aaPredicted RBP3.49□□□□□ -1.85
CDCA3-209ENST00000544610 ATP11AUNQ6ZP68 121 aa3.49□□□□□ -1.85
CDCA3-209ENST00000544610 NDUFC1O43677 76 aa3.48□□□□□ -1.85
CDCA3-209ENST00000544610 KLKP1Q107X0 134 aa3.48□□□□□ -1.85
CDCA3-209ENST00000544610 PCOTHQ58A44 107 aa3.48□□□□□ -1.85
CDCA3-209ENST00000544610 FLGP20930 4061 aaPredicted RBP3.48□□□□□ -1.85
CDCA3-209ENST00000544610 KRTAP10-6P60371 365 aaPredicted RBP3.47□□□□□ -1.85
CDCA3-209ENST00000544610 H0Y9P7 68 aa3.46□□□□□ -1.86
CDCA3-209ENST00000544610 Q5W150 140 aa3.45□□□□□ -1.86
CDCA3-209ENST00000544610 C7orf65Q6ZTY9 151 aa3.45□□□□□ -1.86
CDCA3-209ENST00000544610 USH2AO75445 5202 aa3.45□□□□□ -1.86
CDCA3-209ENST00000544610 C1orf64Q8NEQ6 169 aa3.44□□□□□ -1.86
CDCA3-209ENST00000544610 CYP4F30PQ9H0H9 118 aa3.43□□□□□ -1.86
CDCA3-209ENST00000544610 SSPOA2VEC9 5147 aa3.42□□□□□ -1.86
CDCA3-209ENST00000544610 M0R2T5 61 aa3.42□□□□□ -1.86
CDCA3-209ENST00000544610 C20orf197Q8N268 126 aa3.42□□□□□ -1.86
CDCA3-209ENST00000544610 LINC00208Q96KT6 92 aa3.42□□□□□ -1.86
CDCA3-209ENST00000544610 SPANXA2-OT1Q8N9U9 137 aa3.41□□□□□ -1.86
CDCA3-209ENST00000544610 SPINK7P58062 85 aa3.4□□□□□ -1.87
CDCA3-209ENST00000544610 NDUFAF8A1L188 74 aa3.39□□□□□ -1.87
CDCA3-209ENST00000544610 COX6B2Q6YFQ2 88 aa3.39□□□□□ -1.87
CDCA3-209ENST00000544610 A8MUN3 132 aa3.38□□□□□ -1.87
CDCA3-209ENST00000544610 H7BZZ5 65 aa3.38□□□□□ -1.87
CDCA3-209ENST00000544610 ATP5EP56381 51 aaPredicted RBP3.38□□□□□ -1.87
CDCA3-209ENST00000544610 CCDC179H3BU77 68 aa3.37□□□□□ -1.87
CDCA3-209ENST00000544610 KRTAP5-9P26371 169 aa3.36□□□□□ -1.87
CDCA3-209ENST00000544610 TMEM258P61165 79 aa3.36□□□□□ -1.87
CDCA3-209ENST00000544610 SNURFQ9Y675 71 aa3.36□□□□□ -1.87
CDCA3-209ENST00000544610 HRES1P13985 223 aa3.34□□□□□ -1.87
CDCA3-209ENST00000544610 RBM12B-AS1Q9P1G2 102 aa3.34□□□□□ -1.87
CDCA3-209ENST00000544610 V9GYY9 64 aa3.34□□□□□ -1.87
CDCA3-209ENST00000544610 FCGBPQ9Y6R7 5405 aaPredicted RBP3.33□□□□□ -1.88
CDCA3-209ENST00000544610 DMAC1Q96GE9 116 aa3.33□□□□□ -1.88
CDCA3-209ENST00000544610 ACYP2P14621 99 aa3.31□□□□□ -1.88
CDCA3-209ENST00000544610 CYSTM1Q9H1C7 97 aa3.31□□□□□ -1.88
CDCA3-209ENST00000544610 KRTAP5-1Q6L8H4 278 aa3.3□□□□□ -1.88
CDCA3-209ENST00000544610 FAM236DA0A1B0GTK5 79 aa3.29□□□□□ -1.88
CDCA3-209ENST00000544610 FAM236CP0DP71 79 aa3.29□□□□□ -1.88
CDCA3-209ENST00000544610 C4orf26Q17RF5 130 aa3.29□□□□□ -1.88
CDCA3-209ENST00000544610 KRTAP5-4Q6L8H1 288 aa3.28□□□□□ -1.88
CDCA3-209ENST00000544610 MACF1Q9UPN3 7388 aaKnown RBP3.27□□□□□ -1.89
CDCA3-209ENST00000544610 H1FX-AS1Q4G0G2 97 aa3.27□□□□□ -1.89
CDCA3-209ENST00000544610 RPS28P62857 69 aaKnown RBP3.26□□□□□ -1.89
CDCA3-209ENST00000544610 MT2AP02795 61 aa3.25□□□□□ -1.89
CDCA3-209ENST00000544610 SPTSSBQ8NFR3 76 aa3.25□□□□□ -1.89
CDCA3-209ENST00000544610 SERP1Q9Y6X1 66 aa3.25□□□□□ -1.89
CDCA3-209ENST00000544610 SYNE2Q8WXH0 6885 aaKnown RBP3.24□□□□□ -1.89
CDCA3-209ENST00000544610 MT1FP04733 61 aa3.22□□□□□ -1.89
CDCA3-209ENST00000544610 COA5Q86WW8 74 aa3.21□□□□□ -1.9
CDCA3-209ENST00000544610 KRTAP4-4Q9BYR3 166 aa3.21□□□□□ -1.9
CDCA3-209ENST00000544610 CHKB-CPT1BH3BT56 60 aa3.2□□□□□ -1.9
CDCA3-209ENST00000544610 S4R3F8 94 aa3.2□□□□□ -1.9
CDCA3-209ENST00000544610 H0YAA0 97 aa3.18□□□□□ -1.9
CDCA3-209ENST00000544610 CSAG1Q6PB30 78 aa3.18□□□□□ -1.9
CDCA3-209ENST00000544610 KRTAP10-10P60014 251 aa3.17□□□□□ -1.9
CDCA3-209ENST00000544610 LCA10Q71F78 164 aa3.17□□□□□ -1.9
CDCA3-209ENST00000544610 SMIM26A0A096LP01 95 aa3.16□□□□□ -1.9
CDCA3-209ENST00000544610 CAMK2N1Q7Z7J9 78 aa3.16□□□□□ -1.9
CDCA3-209ENST00000544610 KRTAP19-6Q3LI70 58 aa3.15□□□□□ -1.91
CDCA3-209ENST00000544610 LCE1EQ5T753 118 aa3.14□□□□□ -1.91
CDCA3-209ENST00000544610 Q1T7F1 81 aa3.13□□□□□ -1.91
CDCA3-209ENST00000544610 LINC01558Q9Y6Z2 57 aa3.12□□□□□ -1.91
CDCA3-209ENST00000544610 PRR15LQ9BU68 103 aa3.1□□□□□ -1.91
CDCA3-209ENST00000544610 KRTAP6-3Q3LI67 103 aa3.09□□□□□ -1.91
CDCA3-209ENST00000544610 MUC12Q9UKN1 5478 aa3.09□□□□□ -1.92
CDCA3-209ENST00000544610 MT3P25713 68 aa3.07□□□□□ -1.92
CDCA3-209ENST00000544610 LCE1AQ5T7P2 110 aa3.07□□□□□ -1.92
CDCA3-209ENST00000544610 CRIPTQ9P021 101 aa3.07□□□□□ -1.92
CDCA3-209ENST00000544610 A0A1B0GU69 56 aa3.06□□□□□ -1.92
CDCA3-209ENST00000544610 PSPHP1O15172 72 aa3.06□□□□□ -1.92
CDCA3-209ENST00000544610 NEBP20929 6669 aa3.05□□□□□ -1.92
CDCA3-209ENST00000544610 PRO0628Q9UI54 55 aa3.04□□□□□ -1.92
CDCA3-209ENST00000544610 M0QZ58 72 aa3.03□□□□□ -1.92
CDCA3-209ENST00000544610 ADM2Q7Z4H4 148 aa3.02□□□□□ -1.93
CDCA3-209ENST00000544610 A0A1B0GU33 70 aa3□□□□□ -1.93
CDCA3-209ENST00000544610 Q5VV11 94 aa3□□□□□ -1.93
CDCA3-209ENST00000544610 UQCR11O14957 56 aa2.99□□□□□ -1.93
CDCA3-209ENST00000544610 MDN1Q9NU22 5596 aa2.98□□□□□ -1.93
CDCA3-209ENST00000544610 P0C880 135 aa2.98□□□□□ -1.93
CDCA3-209ENST00000544610 SPRR2GQ9BYE4 73 aa2.97□□□□□ -1.93
CDCA3-209ENST00000544610 R4GN34 69 aa2.97□□□□□ -1.93
CDCA3-209ENST00000544610 A6NN06 94 aa2.96□□□□□ -1.94
CDCA3-209ENST00000544610 KMT2DO14686 5537 aa2.94□□□□□ -1.94
CDCA3-209ENST00000544610 KRTAP20-1Q3LI63 56 aa2.93□□□□□ -1.94
CDCA3-209ENST00000544610 SPATA8Q6RVD6 105 aa2.93□□□□□ -1.94
CDCA3-209ENST00000544610 MT1BP07438 61 aa2.92□□□□□ -1.94
CDCA3-209ENST00000544610 A6NED7 52 aa2.91□□□□□ -1.94
CDCA3-209ENST00000544610 MIR22HGQ0VDD5 57 aa2.91□□□□□ -1.94
CDCA3-209ENST00000544610 OBSCNQ5VST9 7968 aa2.9□□□□□ -1.94
Retrieved 100 of 20,778 RNA–protein pairs in 51.9 ms