RNA–Protein interactions for RNA: ENST00000543491.2

PCDH7-206, Transcript of protocadherin 7, humanhuman

APPRIS ALT2 BASIC

Gene PCDH7, Length 4,457 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH7-206ENST00000543491 VPS13DQ5THJ4 4388 aa8.46□□□□□ -1.05
PCDH7-206ENST00000543491 FAT1Q14517 4588 aa8.42□□□□□ -1.06
PCDH7-206ENST00000543491 MT1HL1P0DM35 61 aa8.42□□□□□ -1.06
PCDH7-206ENST00000543491 KRTAP3-2Q9BYR7 98 aa8.41□□□□□ -1.06
PCDH7-206ENST00000543491 KMT2AQ03164 3969 aa8.4□□□□□ -1.06
PCDH7-206ENST00000543491 KRTAP3-3Q9BYR6 98 aa8.36□□□□□ -1.07
PCDH7-206ENST00000543491 KRTAP4-5Q9BYR2 181 aa8.36□□□□□ -1.07
PCDH7-206ENST00000543491 LYSTQ99698 3801 aa8.33□□□□□ -1.08
PCDH7-206ENST00000543491 LRP1BQ9NZR2 4599 aa8.33□□□□□ -1.08
PCDH7-206ENST00000543491 DNAH17Q9UFH2 4485 aa8.32□□□□□ -1.08
PCDH7-206ENST00000543491 DYNC1H1Q14204 4646 aaKnown RBP8.28□□□□□ -1.08
PCDH7-206ENST00000543491 DNAH8Q96JB1 4490 aa8.27□□□□□ -1.09
PCDH7-206ENST00000543491 DNAH2Q9P225 4427 aa8.26□□□□□ -1.09
PCDH7-206ENST00000543491 CMYA5Q8N3K9 4069 aa8.23□□□□□ -1.09
PCDH7-206ENST00000543491 DNAH3Q8TD57 4116 aa8.22□□□□□ -1.09
PCDH7-206ENST00000543491 ALMS1Q8TCU4 4167 aa8.21□□□□□ -1.09
PCDH7-206ENST00000543491 KRTAP10-10P60014 251 aa8.15□□□□□ -1.11
PCDH7-206ENST00000543491 DNAH7Q8WXX0 4024 aa8.12□□□□□ -1.11
PCDH7-206ENST00000543491 KIAA1109Q2LD37 5005 aa8.1□□□□□ -1.11
PCDH7-206ENST00000543491 RYR1P21817 5038 aa8.1□□□□□ -1.11
PCDH7-206ENST00000543491 MYCBP2O75592 4640 aa8.06□□□□□ -1.12
PCDH7-206ENST00000543491 DYNC2H1Q8NCM8 4307 aaKnown RBP8.05□□□□□ -1.12
PCDH7-206ENST00000543491 DNAH6Q9C0G6 4158 aa8.03□□□□□ -1.12
PCDH7-206ENST00000543491 VPS13BQ7Z7G8 4022 aa8.02□□□□□ -1.13
PCDH7-206ENST00000543491 FRAS1Q86XX4 4008 aa8□□□□□ -1.13
PCDH7-206ENST00000543491 SACSQ9NZJ4 4579 aa7.98□□□□□ -1.13
PCDH7-206ENST00000543491 RYR3Q15413 4870 aa7.92□□□□□ -1.14
PCDH7-206ENST00000543491 HYDINQ4G0P3 5121 aa7.92□□□□□ -1.14
PCDH7-206ENST00000543491 FAT2Q9NYQ8 4349 aa7.91□□□□□ -1.14
PCDH7-206ENST00000543491 HECTD4Q9Y4D8 3996 aa7.9□□□□□ -1.14
PCDH7-206ENST00000543491 LRP1Q07954 4544 aaKnown RBP7.9□□□□□ -1.14
PCDH7-206ENST00000543491 APOBP04114 4563 aaKnown RBP7.88□□□□□ -1.15
PCDH7-206ENST00000543491 FAT3Q8TDW7 4589 aa7.85□□□□□ -1.15
PCDH7-206ENST00000543491 PRO2289Q9P1D8 64 aa7.84□□□□□ -1.16
PCDH7-206ENST00000543491 PKHD1P08F94 4074 aa7.81□□□□□ -1.16
PCDH7-206ENST00000543491 KRTAP17-1Q9BYP8 105 aa7.78□□□□□ -1.16
PCDH7-206ENST00000543491 INE1O15225 51 aa7.77□□□□□ -1.17
PCDH7-206ENST00000543491 KRTAP23-1A1A580 65 aa7.74□□□□□ -1.17
PCDH7-206ENST00000543491 RYR2Q92736 4967 aa7.69□□□□□ -1.18
PCDH7-206ENST00000543491 LORP23490 312 aaPredicted RBP7.68□□□□□ -1.18
PCDH7-206ENST00000543491 KRTAP4-1Q9BYQ7 146 aa7.67□□□□□ -1.18
PCDH7-206ENST00000543491 KMT2CQ8NEZ4 4911 aaKnown RBP7.67□□□□□ -1.18
PCDH7-206ENST00000543491 LRP2P98164 4655 aa7.52□□□□□ -1.2
PCDH7-206ENST00000543491 HERC2O95714 4834 aa7.48□□□□□ -1.21
PCDH7-206ENST00000543491 PKD1P98161 4303 aa7.44□□□□□ -1.22
PCDH7-206ENST00000543491 HSPG2P98160 4391 aa7.39□□□□□ -1.23
PCDH7-206ENST00000543491 KRTAP10-12P60413 245 aa7.36□□□□□ -1.23
PCDH7-206ENST00000543491 LCE3AQ5TA76 89 aa7.35□□□□□ -1.23
PCDH7-206ENST00000543491 KRTAP12-3P60328 96 aa7.33□□□□□ -1.24
PCDH7-206ENST00000543491 EPPK1P58107 5090 aaKnown RBP7.23□□□□□ -1.25
PCDH7-206ENST00000543491 LPAP08519 4548 aa7.2□□□□□ -1.26
PCDH7-206ENST00000543491 MT1HP80294 61 aa7.16□□□□□ -1.26
PCDH7-206ENST00000543491 BIRC6Q9NR09 4857 aa7.1□□□□□ -1.27
PCDH7-206ENST00000543491 ABCA13Q86UQ4 5058 aa7.07□□□□□ -1.28
PCDH7-206ENST00000543491 MT2AP02795 61 aa7.07□□□□□ -1.28
PCDH7-206ENST00000543491 MT1FP04733 61 aa7.01□□□□□ -1.29
PCDH7-206ENST00000543491 PKHD1L1Q86WI1 4243 aa7□□□□□ -1.29
PCDH7-206ENST00000543491 SPRR2GQ9BYE4 73 aa6.98□□□□□ -1.29
PCDH7-206ENST00000543491 PCLOQ9Y6V0 5065 aa6.98□□□□□ -1.29
PCDH7-206ENST00000543491 TNXBP22105 4242 aa6.97□□□□□ -1.29
PCDH7-206ENST00000543491 HERC1Q15751 4861 aa6.9□□□□□ -1.3
PCDH7-206ENST00000543491 KRTAP8-1Q8IUC2 63 aa6.89□□□□□ -1.31
PCDH7-206ENST00000543491 SPRR5A0A1B0GTR4 108 aa6.86□□□□□ -1.31
PCDH7-206ENST00000543491 KRTAP19-1Q8IUB9 90 aa6.82□□□□□ -1.32
PCDH7-206ENST00000543491 LCE2CQ5TA81 110 aa6.76□□□□□ -1.33
PCDH7-206ENST00000543491 MUC2Q02817 5179 aa6.74□□□□□ -1.33
PCDH7-206ENST00000543491 RNF213Q63HN8 5207 aa6.7□□□□□ -1.34
PCDH7-206ENST00000543491 CRCT1Q9UGL9 99 aa6.68□□□□□ -1.34
PCDH7-206ENST00000543491 KRTAP19-2Q3LHN2 52 aa6.67□□□□□ -1.34
PCDH7-206ENST00000543491 MUC17Q685J3 4493 aa6.63□□□□□ -1.35
PCDH7-206ENST00000543491 KRTAP9-8Q9BYQ0 159 aa6.63□□□□□ -1.35
PCDH7-206ENST00000543491 FAT4Q6V0I7 4981 aa6.58□□□□□ -1.36
PCDH7-206ENST00000543491 LCE3CQ5T5A8 94 aa6.56□□□□□ -1.36
PCDH7-206ENST00000543491 UBR4Q5T4S7 5183 aa6.55□□□□□ -1.36
PCDH7-206ENST00000543491 KRTAP19-8Q3LI54 63 aa6.54□□□□□ -1.36
PCDH7-206ENST00000543491 FLGP20930 4061 aaPredicted RBP6.53□□□□□ -1.36
PCDH7-206ENST00000543491 MT1BP07438 61 aa6.51□□□□□ -1.37
PCDH7-206ENST00000543491 KRTAP19-5Q3LI72 72 aa6.5□□□□□ -1.37
PCDH7-206ENST00000543491 KRTAP10-7P60409 375 aaPredicted RBP6.5□□□□□ -1.37
PCDH7-206ENST00000543491 FSIP2Q5CZC0 6907 aa6.49□□□□□ -1.37
PCDH7-206ENST00000543491 KRTAP10-5P60370 271 aa6.49□□□□□ -1.37
PCDH7-206ENST00000543491 MT1XP80297 61 aa6.47□□□□□ -1.37
PCDH7-206ENST00000543491 KRTAP19-4Q3LI73 84 aa6.42□□□□□ -1.38
PCDH7-206ENST00000543491 HMCN2Q8NDA2 5059 aa6.41□□□□□ -1.38
PCDH7-206ENST00000543491 KRTAP9-3Q9BYQ3 159 aa6.4□□□□□ -1.39
PCDH7-206ENST00000543491 KRTAP4-8A0A0G2JLE6 195 aa6.28□□□□□ -1.4
PCDH7-206ENST00000543491 KRTAP4-8Q9BYQ9 185 aa6.28□□□□□ -1.4
PCDH7-206ENST00000543491 LCE2BO14633 110 aa6.23□□□□□ -1.41
PCDH7-206ENST00000543491 SPRR2FQ96RM1 72 aa6.17□□□□□ -1.42
PCDH7-206ENST00000543491 KRTAP12-4P60329 112 aa5.98□□□□□ -1.45
PCDH7-206ENST00000543491 LCE2AQ5TA79 106 aaPredicted RBP5.93□□□□□ -1.46
PCDH7-206ENST00000543491 KRTAP4-7Q9BYR0 210 aa5.91□□□□□ -1.46
PCDH7-206ENST00000543491 USH2AO75445 5202 aa5.86□□□□□ -1.47
PCDH7-206ENST00000543491 SYNE1Q8NF91 8797 aaKnown RBP5.84□□□□□ -1.47
PCDH7-206ENST00000543491 MT1GP13640 62 aa5.82□□□□□ -1.48
PCDH7-206ENST00000543491 LCE3BQ5TA77 95 aa5.73□□□□□ -1.49
PCDH7-206ENST00000543491 MT1LQ93083 61 aa5.72□□□□□ -1.49
PCDH7-206ENST00000543491 MT1EP04732 61 aa5.71□□□□□ -1.49
PCDH7-206ENST00000543491 OBSCNQ5VST9 7968 aa5.7□□□□□ -1.5
PCDH7-206ENST00000543491 SPRR2EP22531 72 aa5.66□□□□□ -1.5
Retrieved 100 of 20,778 RNA–protein pairs in 50 ms