RNA–Protein interactions for RNA: ENST00000543216.5

KDM6A-212, Transcript of lysine demethylase 6A, humanhuman

TSL 1 (best) BASIC

Gene KDM6A, Length 5,655 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KDM6A-212ENST00000543216 KRTAP4-1Q9BYQ7 146 aa6.23□□□□□ -1.41
KDM6A-212ENST00000543216 MUC3AQ02505 3323 aa6.22□□□□□ -1.41
KDM6A-212ENST00000543216 SPENQ96T58 3664 aaKnown RBP6.2□□□□□ -1.42
KDM6A-212ENST00000543216 KRTAP10-7P60409 375 aaPredicted RBP6.19□□□□□ -1.42
KDM6A-212ENST00000543216 MT1HP80294 61 aa6.18□□□□□ -1.42
KDM6A-212ENST00000543216 CSMD2Q7Z408 3487 aa6.17□□□□□ -1.42
KDM6A-212ENST00000543216 MT2AP02795 61 aa6.17□□□□□ -1.42
KDM6A-212ENST00000543216 TRRAPQ9Y4A5 3859 aa6.15□□□□□ -1.43
KDM6A-212ENST00000543216 DNAH2Q9P225 4427 aa6.14□□□□□ -1.43
KDM6A-212ENST00000543216 DNAH11Q96DT5 4516 aa6.09□□□□□ -1.43
KDM6A-212ENST00000543216 DNAH10Q8IVF4 4471 aa6.09□□□□□ -1.44
KDM6A-212ENST00000543216 KRTAP19-4Q3LI73 84 aa6.06□□□□□ -1.44
KDM6A-212ENST00000543216 SPRR2FQ96RM1 72 aa6.05□□□□□ -1.44
KDM6A-212ENST00000543216 MT1FP04733 61 aa6.03□□□□□ -1.44
KDM6A-212ENST00000543216 KRTAP12-4P60329 112 aa5.97□□□□□ -1.45
KDM6A-212ENST00000543216 DNAH5Q8TE73 4624 aa5.97□□□□□ -1.45
KDM6A-212ENST00000543216 LCE3BQ5TA77 95 aa5.93□□□□□ -1.46
KDM6A-212ENST00000543216 DNAH8Q96JB1 4490 aa5.9□□□□□ -1.46
KDM6A-212ENST00000543216 FAT1Q14517 4588 aa5.9□□□□□ -1.47
KDM6A-212ENST00000543216 CSMD3Q7Z407 3707 aa5.89□□□□□ -1.47
KDM6A-212ENST00000543216 DNAH1Q9P2D7 4330 aa5.89□□□□□ -1.47
KDM6A-212ENST00000543216 VPS13CQ709C8 3753 aa5.81□□□□□ -1.48
KDM6A-212ENST00000543216 PLECQ15149 4684 aaKnown RBP5.81□□□□□ -1.48
KDM6A-212ENST00000543216 SPRR5A0A1B0GTR4 108 aa5.8□□□□□ -1.48
KDM6A-212ENST00000543216 DNAH9Q9NYC9 4486 aa5.8□□□□□ -1.48
KDM6A-212ENST00000543216 BSNQ9UPA5 3926 aa5.79□□□□□ -1.48
KDM6A-212ENST00000543216 MT1GP13640 62 aa5.74□□□□□ -1.49
KDM6A-212ENST00000543216 DNAH17Q9UFH2 4485 aa5.74□□□□□ -1.49
KDM6A-212ENST00000543216 KRTAP19-8Q3LI54 63 aa5.7□□□□□ -1.5
KDM6A-212ENST00000543216 LCE3DQ9BYE3 92 aa5.67□□□□□ -1.5
KDM6A-212ENST00000543216 KRTAP19-1Q8IUB9 90 aa5.66□□□□□ -1.5
KDM6A-212ENST00000543216 MT1XP80297 61 aa5.65□□□□□ -1.51
KDM6A-212ENST00000543216 SPRR2EP22531 72 aa5.62□□□□□ -1.51
KDM6A-212ENST00000543216 SPRR2BP35325 72 aa5.62□□□□□ -1.51
KDM6A-212ENST00000543216 SPRR2AP35326 72 aa5.62□□□□□ -1.51
KDM6A-212ENST00000543216 SACSQ9NZJ4 4579 aa5.62□□□□□ -1.51
KDM6A-212ENST00000543216 LCE3EQ5T5B0 92 aa5.6□□□□□ -1.51
KDM6A-212ENST00000543216 VPS13DQ5THJ4 4388 aa5.56□□□□□ -1.52
KDM6A-212ENST00000543216 AKAP9Q99996 3911 aa5.56□□□□□ -1.52
KDM6A-212ENST00000543216 DNAH3Q8TD57 4116 aa5.52□□□□□ -1.53
KDM6A-212ENST00000543216 DYNC1H1Q14204 4646 aaKnown RBP5.51□□□□□ -1.53
KDM6A-212ENST00000543216 LRP1BQ9NZR2 4599 aa5.49□□□□□ -1.53
KDM6A-212ENST00000543216 MT1BP07438 61 aa5.47□□□□□ -1.53
KDM6A-212ENST00000543216 FAT2Q9NYQ8 4349 aa5.47□□□□□ -1.53
KDM6A-212ENST00000543216 LRP1Q07954 4544 aaKnown RBP5.46□□□□□ -1.54
KDM6A-212ENST00000543216 APOBP04114 4563 aaKnown RBP5.46□□□□□ -1.54
KDM6A-212ENST00000543216 DYNC2H1Q8NCM8 4307 aaKnown RBP5.44□□□□□ -1.54
KDM6A-212ENST00000543216 KRTAP4-8A0A0G2JLE6 195 aa5.44□□□□□ -1.54
KDM6A-212ENST00000543216 KRTAP4-8Q9BYQ9 185 aa5.44□□□□□ -1.54
KDM6A-212ENST00000543216 LCE2BO14633 110 aa5.44□□□□□ -1.54
KDM6A-212ENST00000543216 SPRR2DP22532 72 aa5.44□□□□□ -1.54
KDM6A-212ENST00000543216 ZNF469Q96JG9 3925 aaPredicted RBP5.42□□□□□ -1.54
KDM6A-212ENST00000543216 CMYA5Q8N3K9 4069 aa5.41□□□□□ -1.54
KDM6A-212ENST00000543216 ANK2Q01484 3957 aa5.38□□□□□ -1.55
KDM6A-212ENST00000543216 FAT3Q8TDW7 4589 aa5.37□□□□□ -1.55
KDM6A-212ENST00000543216 RYR1P21817 5038 aa5.32□□□□□ -1.56
KDM6A-212ENST00000543216 DNAH6Q9C0G6 4158 aa5.32□□□□□ -1.56
KDM6A-212ENST00000543216 PRM1P04553 51 aa5.31□□□□□ -1.56
KDM6A-212ENST00000543216 KRTAP4-7Q9BYR0 210 aa5.28□□□□□ -1.56
KDM6A-212ENST00000543216 KRTAP9-8Q9BYQ0 159 aa5.27□□□□□ -1.57
KDM6A-212ENST00000543216 STARD9Q9P2P6 4700 aa5.26□□□□□ -1.57
KDM6A-212ENST00000543216 MT1LQ93083 61 aa5.23□□□□□ -1.57
KDM6A-212ENST00000543216 VPS13BQ7Z7G8 4022 aa5.23□□□□□ -1.57
KDM6A-212ENST00000543216 KRTAP19-3Q7Z4W3 81 aa5.2□□□□□ -1.58
KDM6A-212ENST00000543216 MYCBP2O75592 4640 aa5.19□□□□□ -1.58
KDM6A-212ENST00000543216 KRTAP9-3Q9BYQ3 159 aa5.17□□□□□ -1.58
KDM6A-212ENST00000543216 DNAH7Q8WXX0 4024 aa5.15□□□□□ -1.59
KDM6A-212ENST00000543216 PRKDCP78527 4128 aaKnown RBP5.14□□□□□ -1.59
KDM6A-212ENST00000543216 HERC1Q15751 4861 aa5.13□□□□□ -1.59
KDM6A-212ENST00000543216 MT1EP04732 61 aa5.1□□□□□ -1.59
KDM6A-212ENST00000543216 FRAS1Q86XX4 4008 aa5.07□□□□□ -1.6
KDM6A-212ENST00000543216 DNHD1Q96M86 4753 aa5.07□□□□□ -1.6
KDM6A-212ENST00000543216 RYR3Q15413 4870 aa5.07□□□□□ -1.6
KDM6A-212ENST00000543216 MT3P25713 68 aa5.06□□□□□ -1.6
KDM6A-212ENST00000543216 LCE2CQ5TA81 110 aa5.06□□□□□ -1.6
KDM6A-212ENST00000543216 HSPG2P98160 4391 aa5.05□□□□□ -1.6
KDM6A-212ENST00000543216 KRTAP17-1Q9BYP8 105 aa5.03□□□□□ -1.6
KDM6A-212ENST00000543216 LCE2DQ5TA82 110 aaPredicted RBP4.99□□□□□ -1.61
KDM6A-212ENST00000543216 KMT2AQ03164 3969 aa4.99□□□□□ -1.61
KDM6A-212ENST00000543216 LOC100996750A0A140TA64 210 aa4.99□□□□□ -1.61
KDM6A-212ENST00000543216 MT1MQ8N339 61 aa4.97□□□□□ -1.61
KDM6A-212ENST00000543216 PKD1P98161 4303 aa4.93□□□□□ -1.62
KDM6A-212ENST00000543216 LCE1BQ5T7P3 118 aa4.9□□□□□ -1.63
KDM6A-212ENST00000543216 LYSTQ99698 3801 aa4.9□□□□□ -1.63
KDM6A-212ENST00000543216 HECTD4Q9Y4D8 3996 aa4.89□□□□□ -1.63
KDM6A-212ENST00000543216 KRTAP4-3Q9BYR4 195 aa4.84□□□□□ -1.63
KDM6A-212ENST00000543216 LCE1DQ5T752 114 aa4.84□□□□□ -1.63
KDM6A-212ENST00000543216 MT4P47944 62 aa4.83□□□□□ -1.64
KDM6A-212ENST00000543216 RYR2Q92736 4967 aa4.82□□□□□ -1.64
KDM6A-212ENST00000543216 KRTAP2-3P0C7H8 128 aa4.78□□□□□ -1.64
KDM6A-212ENST00000543216 KRTAP2-4Q9BYR9 128 aa4.78□□□□□ -1.64
KDM6A-212ENST00000543216 KRTAP2-1Q9BYU5 128 aa4.78□□□□□ -1.64
KDM6A-212ENST00000543216 KRTAP4-9Q9BYQ8 210 aa4.76□□□□□ -1.65
KDM6A-212ENST00000543216 HERC2O95714 4834 aa4.72□□□□□ -1.65
KDM6A-212ENST00000543216 MT1AP04731 61 aa4.69□□□□□ -1.66
KDM6A-212ENST00000543216 KRTAP19-2Q3LHN2 52 aa4.68□□□□□ -1.66
KDM6A-212ENST00000543216 KIAA1109Q2LD37 5005 aa4.65□□□□□ -1.66
KDM6A-212ENST00000543216 PKHD1L1Q86WI1 4243 aa4.65□□□□□ -1.67
KDM6A-212ENST00000543216 LRP2P98164 4655 aa4.62□□□□□ -1.67
KDM6A-212ENST00000543216 KMT2CQ8NEZ4 4911 aaKnown RBP4.59□□□□□ -1.67
Retrieved 100 of 20,778 RNA–protein pairs in 105.6 ms