RNA–Protein interactions for RNA: ENST00000543190.5

LTBR-211, Transcript of lymphotoxin beta receptor, humanhuman

TSL 3 BASIC

Gene LTBR, Length 785 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LTBR-211ENST00000543190 LOC101927531A0A1B0GV80 90 aa8.09□□□□□ -1.11
LTBR-211ENST00000543190 IMUPQ9GZP8 106 aa8.09□□□□□ -1.11
LTBR-211ENST00000543190 TRAV22A0A0B4J277 110 aa8.07□□□□□ -1.12
LTBR-211ENST00000543190 F8W1H4 67 aa8.07□□□□□ -1.12
LTBR-211ENST00000543190 KMT2DO14686 5537 aa8.07□□□□□ -1.12
LTBR-211ENST00000543190 A0A087WVE0 104 aa8.05□□□□□ -1.12
LTBR-211ENST00000543190 J3QR89 54 aa7.99□□□□□ -1.13
LTBR-211ENST00000543190 ETDBQ3ZM63 59 aa7.98□□□□□ -1.13
LTBR-211ENST00000543190 NDUFC1O43677 76 aa7.97□□□□□ -1.13
LTBR-211ENST00000543190 K7ERU9 68 aa7.96□□□□□ -1.14
LTBR-211ENST00000543190 MDN1Q9NU22 5596 aa7.96□□□□□ -1.14
LTBR-211ENST00000543190 ATOX1O00244 68 aa7.95□□□□□ -1.14
LTBR-211ENST00000543190 A8MUN3 132 aa7.94□□□□□ -1.14
LTBR-211ENST00000543190 UQCRQO14949 82 aa7.93□□□□□ -1.14
LTBR-211ENST00000543190 ACYP1P07311 99 aa7.93□□□□□ -1.14
LTBR-211ENST00000543190 ATP5EP2Q5VTU8 51 aa7.92□□□□□ -1.14
LTBR-211ENST00000543190 PRO2289Q9P1D8 64 aa7.91□□□□□ -1.14
LTBR-211ENST00000543190 FAM240AA0A1B0GVK7 77 aa7.89□□□□□ -1.15
LTBR-211ENST00000543190 KRTAP2-3P0C7H8 128 aa7.88□□□□□ -1.15
LTBR-211ENST00000543190 KRTAP2-4Q9BYR9 128 aa7.88□□□□□ -1.15
LTBR-211ENST00000543190 MT1XP80297 61 aa7.86□□□□□ -1.15
LTBR-211ENST00000543190 H0Y9P7 68 aa7.85□□□□□ -1.15
LTBR-211ENST00000543190 ADM2Q7Z4H4 148 aa7.82□□□□□ -1.16
LTBR-211ENST00000543190 KRTAP12-2P59991 146 aa7.81□□□□□ -1.16
LTBR-211ENST00000543190 SPRR2FQ96RM1 72 aa7.8□□□□□ -1.16
LTBR-211ENST00000543190 HIST1H4AP62805 103 aaKnown RBP7.76□□□□□ -1.17
LTBR-211ENST00000543190 PLAC4Q8WY50 150 aa7.75□□□□□ -1.17
LTBR-211ENST00000543190 SPRR2EP22531 72 aa7.74□□□□□ -1.17
LTBR-211ENST00000543190 SPRR2BP35325 72 aa7.74□□□□□ -1.17
LTBR-211ENST00000543190 SPRR2AP35326 72 aa7.74□□□□□ -1.17
LTBR-211ENST00000543190 KRTAP8-1Q8IUC2 63 aa7.71□□□□□ -1.18
LTBR-211ENST00000543190 LCE1AQ5T7P2 110 aa7.7□□□□□ -1.18
LTBR-211ENST00000543190 C20orf197Q8N268 126 aa7.7□□□□□ -1.18
LTBR-211ENST00000543190 LINC00208Q96KT6 92 aa7.7□□□□□ -1.18
LTBR-211ENST00000543190 OCR1Q9BZK8 76 aa7.69□□□□□ -1.18
LTBR-211ENST00000543190 R4GN34 69 aa7.69□□□□□ -1.18
LTBR-211ENST00000543190 LINC00643Q86TS7 51 aa7.68□□□□□ -1.18
LTBR-211ENST00000543190 P0C880 135 aa7.64□□□□□ -1.19
LTBR-211ENST00000543190 MP68P56378 58 aa7.64□□□□□ -1.19
LTBR-211ENST00000543190 KRTAP2-2Q9BYT5 123 aa7.61□□□□□ -1.19
LTBR-211ENST00000543190 KRTAP2-1Q9BYU5 128 aa7.61□□□□□ -1.19
LTBR-211ENST00000543190 H3BPC8 53 aa7.6□□□□□ -1.19
LTBR-211ENST00000543190 DMAC1Q96GE9 116 aa7.59□□□□□ -1.19
LTBR-211ENST00000543190 KRTAP3-2Q9BYR7 98 aa7.59□□□□□ -1.19
LTBR-211ENST00000543190 M0QZ58 72 aa7.57□□□□□ -1.2
LTBR-211ENST00000543190 SCGB1A1P11684 91 aa7.55□□□□□ -1.2
LTBR-211ENST00000543190 KRTAP4-8A0A0G2JLE6 195 aa7.54□□□□□ -1.2
LTBR-211ENST00000543190 KRTAP4-8Q9BYQ9 185 aa7.54□□□□□ -1.2
LTBR-211ENST00000543190 KRTAP10-12P60413 245 aa7.51□□□□□ -1.21
LTBR-211ENST00000543190 SPRR2DP22532 72 aa7.49□□□□□ -1.21
LTBR-211ENST00000543190 MT-ATP8P03928 68 aa7.45□□□□□ -1.22
LTBR-211ENST00000543190 TRAV7A0A075B6U4 112 aa7.44□□□□□ -1.22
LTBR-211ENST00000543190 KRTAP10-7P60409 375 aaPredicted RBP7.44□□□□□ -1.22
LTBR-211ENST00000543190 LINC01554Q52M75 96 aa7.4□□□□□ -1.22
LTBR-211ENST00000543190 PCP4P48539 62 aa7.34□□□□□ -1.23
LTBR-211ENST00000543190 LCE3BQ5TA77 95 aa7.33□□□□□ -1.24
LTBR-211ENST00000543190 ACYP2P14621 99 aa7.32□□□□□ -1.24
LTBR-211ENST00000543190 SPTSSBQ8NFR3 76 aa7.29□□□□□ -1.24
LTBR-211ENST00000543190 SMIM20Q8N5G0 67 aa7.28□□□□□ -1.24
LTBR-211ENST00000543190 ANAPC13Q9BS18 74 aa7.28□□□□□ -1.24
LTBR-211ENST00000543190 SERP2Q8N6R1 65 aa7.16□□□□□ -1.26
LTBR-211ENST00000543190 COX7CP15954 63 aa7.13□□□□□ -1.27
LTBR-211ENST00000543190 CHKB-CPT1BH3BT56 60 aa7.08□□□□□ -1.28
LTBR-211ENST00000543190 LCE5AQ5TCM9 118 aa7.08□□□□□ -1.28
LTBR-211ENST00000543190 KRTAP13-4Q3LI77 160 aa7.04□□□□□ -1.28
LTBR-211ENST00000543190 KRTAP19-7Q3SYF9 63 aa7.04□□□□□ -1.28
LTBR-211ENST00000543190 SPANXA2-OT1Q8N9U9 137 aa7.04□□□□□ -1.28
LTBR-211ENST00000543190 CCDC179H3BU77 68 aa6.99□□□□□ -1.29
LTBR-211ENST00000543190 MT1EP04732 61 aa6.98□□□□□ -1.29
LTBR-211ENST00000543190 KRTAP19-3Q7Z4W3 81 aa6.98□□□□□ -1.29
LTBR-211ENST00000543190 CAMK2N1Q7Z7J9 78 aa6.98□□□□□ -1.29
LTBR-211ENST00000543190 DSTQ03001 7570 aaKnown RBP6.92□□□□□ -1.3
LTBR-211ENST00000543190 TMEM258P61165 79 aa6.92□□□□□ -1.3
LTBR-211ENST00000543190 SNURFQ9Y675 71 aa6.91□□□□□ -1.3
LTBR-211ENST00000543190 ATP5EP56381 51 aaPredicted RBP6.89□□□□□ -1.31
LTBR-211ENST00000543190 MT1GP13640 62 aa6.83□□□□□ -1.32
LTBR-211ENST00000543190 H7BZZ5 65 aa6.81□□□□□ -1.32
LTBR-211ENST00000543190 KRTAP4-9Q9BYQ8 210 aa6.81□□□□□ -1.32
LTBR-211ENST00000543190 CYSTM1Q9H1C7 97 aa6.79□□□□□ -1.32
LTBR-211ENST00000543190 A0A0D9SG42 100 aa6.77□□□□□ -1.33
LTBR-211ENST00000543190 GPR98Q8WXG9 6306 aa6.77□□□□□ -1.33
LTBR-211ENST00000543190 PP632Q6XCG6 107 aa6.74□□□□□ -1.33
LTBR-211ENST00000543190 COA5Q86WW8 74 aa6.74□□□□□ -1.33
LTBR-211ENST00000543190 KRTAP19-5Q3LI72 72 aa6.73□□□□□ -1.33
LTBR-211ENST00000543190 SEC61GP60059 68 aa6.72□□□□□ -1.33
LTBR-211ENST00000543190 RPS28P62857 69 aaKnown RBP6.72□□□□□ -1.33
LTBR-211ENST00000543190 LCE1DQ5T752 114 aa6.71□□□□□ -1.34
LTBR-211ENST00000543190 LCE4AQ5TA78 99 aa6.71□□□□□ -1.34
LTBR-211ENST00000543190 SERP1Q9Y6X1 66 aa6.71□□□□□ -1.34
LTBR-211ENST00000543190 KRTAP12-1P59990 96 aa6.68□□□□□ -1.34
LTBR-211ENST00000543190 SPATA8Q6RVD6 105 aa6.66□□□□□ -1.34
LTBR-211ENST00000543190 A0A1B0GU33 70 aa6.65□□□□□ -1.34
LTBR-211ENST00000543190 MT1MQ8N339 61 aa6.65□□□□□ -1.34
LTBR-211ENST00000543190 MT1LQ93083 61 aa6.63□□□□□ -1.35
LTBR-211ENST00000543190 SPINT4Q6UDR6 99 aa6.61□□□□□ -1.35
LTBR-211ENST00000543190 KRTAP5-4Q6L8H1 288 aa6.59□□□□□ -1.35
LTBR-211ENST00000543190 HMCN1Q96RW7 5635 aa6.58□□□□□ -1.36
LTBR-211ENST00000543190 SMIM26A0A096LP01 95 aa6.53□□□□□ -1.36
LTBR-211ENST00000543190 MT4P47944 62 aa6.51□□□□□ -1.37
LTBR-211ENST00000543190 V9GYY9 64 aa6.48□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 13.8 ms