RNA–Protein interactions for RNA: ENST00000542879.5

ZEB1-209, Transcript of zinc finger E-box binding homeobox 1, humanhuman

TSL 2

Gene ZEB1, Length 3,645 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZEB1-209ENST00000542879 KRTAP25-1Q3LHN0 102 aa3.05□□□□□ -1.92
ZEB1-209ENST00000542879 A8MUU9 505 aa3.05□□□□□ -1.92
ZEB1-209ENST00000542879 KRTAP3-1Q9BYR8 98 aa3.05□□□□□ -1.92
ZEB1-209ENST00000542879 DMBT1Q9UGM3 2413 aaPredicted RBP3.05□□□□□ -1.92
ZEB1-209ENST00000542879 C20orf166-AS1Q96NR2 134 aa3.03□□□□□ -1.92
ZEB1-209ENST00000542879 MUC17Q685J3 4493 aa3.02□□□□□ -1.93
ZEB1-209ENST00000542879 NDUFAF8A1L188 74 aa3.02□□□□□ -1.93
ZEB1-209ENST00000542879 KRTAP15-1Q3LI76 137 aa3.02□□□□□ -1.93
ZEB1-209ENST00000542879 LINC00304Q8N9R0 145 aa3.02□□□□□ -1.93
ZEB1-209ENST00000542879 KMT2CQ8NEZ4 4911 aaKnown RBP3.02□□□□□ -1.93
ZEB1-209ENST00000542879 H1FX-AS1Q4G0G2 97 aa3□□□□□ -1.93
ZEB1-209ENST00000542879 FLGP20930 4061 aaPredicted RBP3□□□□□ -1.93
ZEB1-209ENST00000542879 LRP1Q07954 4544 aaKnown RBP3□□□□□ -1.93
ZEB1-209ENST00000542879 RYR1P21817 5038 aa3□□□□□ -1.93
ZEB1-209ENST00000542879 A0A1B0GU33 70 aa2.99□□□□□ -1.93
ZEB1-209ENST00000542879 LCE2BO14633 110 aa2.98□□□□□ -1.93
ZEB1-209ENST00000542879 C9orf92A6NGG3 77 aa2.97□□□□□ -1.93
ZEB1-209ENST00000542879 KRTAP10-4P60372 401 aaPredicted RBP2.97□□□□□ -1.93
ZEB1-209ENST00000542879 SPINT4Q6UDR6 99 aa2.96□□□□□ -1.94
ZEB1-209ENST00000542879 COX6B2Q6YFQ2 88 aa2.94□□□□□ -1.94
ZEB1-209ENST00000542879 KRTAP10-6P60371 365 aaPredicted RBP2.92□□□□□ -1.94
ZEB1-209ENST00000542879 SMR3BP02814 79 aaPredicted RBP2.91□□□□□ -1.94
ZEB1-209ENST00000542879 C10orf95Q9H7T3 257 aa2.91□□□□□ -1.94
ZEB1-209ENST00000542879 KRTAP13-4Q3LI77 160 aa2.89□□□□□ -1.95
ZEB1-209ENST00000542879 LPAP08519 4548 aa2.89□□□□□ -1.95
ZEB1-209ENST00000542879 TPRXLQ17RH7 258 aa2.89□□□□□ -1.95
ZEB1-209ENST00000542879 EPPK1P58107 5090 aaKnown RBP2.89□□□□□ -1.95
ZEB1-209ENST00000542879 K7ERS5 55 aa2.87□□□□□ -1.95
ZEB1-209ENST00000542879 RPL37P61927 97 aaKnown RBP2.86□□□□□ -1.95
ZEB1-209ENST00000542879 KRTAP10-8P60410 259 aa2.85□□□□□ -1.95
ZEB1-209ENST00000542879 ABCA13Q86UQ4 5058 aa2.85□□□□□ -1.95
ZEB1-209ENST00000542879 LUZP6Q538Z0 58 aa2.83□□□□□ -1.96
ZEB1-209ENST00000542879 S4R3F8 94 aa2.82□□□□□ -1.96
ZEB1-209ENST00000542879 XP32Q5T750 250 aa2.82□□□□□ -1.96
ZEB1-209ENST00000542879 A0A0D9SG42 100 aa2.81□□□□□ -1.96
ZEB1-209ENST00000542879 KIAA1109Q2LD37 5005 aa2.8□□□□□ -1.96
ZEB1-209ENST00000542879 KRTAP12-2P59991 146 aa2.79□□□□□ -1.96
ZEB1-209ENST00000542879 LCE2CQ5TA81 110 aa2.78□□□□□ -1.96
ZEB1-209ENST00000542879 KRTAP17-1Q9BYP8 105 aa2.78□□□□□ -1.96
ZEB1-209ENST00000542879 PCLOQ9Y6V0 5065 aa2.78□□□□□ -1.96
ZEB1-209ENST00000542879 KRTAP12-1P59990 96 aa2.78□□□□□ -1.97
ZEB1-209ENST00000542879 HERC1Q15751 4861 aa2.74□□□□□ -1.97
ZEB1-209ENST00000542879 LCE2AQ5TA79 106 aaPredicted RBP2.74□□□□□ -1.97
ZEB1-209ENST00000542879 Q5VSD8 79 aa2.73□□□□□ -1.97
ZEB1-209ENST00000542879 LRP2P98164 4655 aa2.73□□□□□ -1.97
ZEB1-209ENST00000542879 MT1HL1P0DM35 61 aa2.72□□□□□ -1.97
ZEB1-209ENST00000542879 LOC100996750A0A140TA64 210 aa2.72□□□□□ -1.97
ZEB1-209ENST00000542879 M0QZ58 72 aa2.72□□□□□ -1.97
ZEB1-209ENST00000542879 KRTAP4-6Q9BYQ5 205 aa2.72□□□□□ -1.97
ZEB1-209ENST00000542879 HMCN2Q8NDA2 5059 aa2.69□□□□□ -1.98
ZEB1-209ENST00000542879 LORP23490 312 aaPredicted RBP2.67□□□□□ -1.98
ZEB1-209ENST00000542879 SPRR5A0A1B0GTR4 108 aa2.64□□□□□ -1.99
ZEB1-209ENST00000542879 PLAC4Q8WY50 150 aa2.6□□□□□ -1.99
ZEB1-209ENST00000542879 R4GN34 69 aa2.6□□□□□ -1.99
ZEB1-209ENST00000542879 SEC61BP60468 96 aaKnown RBP2.59□□□□□ -2
ZEB1-209ENST00000542879 KRTAP19-2Q3LHN2 52 aa2.58□□□□□ -2
ZEB1-209ENST00000542879 KRTAP4-1Q9BYQ7 146 aa2.57□□□□□ -2
ZEB1-209ENST00000542879 KRTAP4-5Q9BYR2 181 aa2.57□□□□□ -2
ZEB1-209ENST00000542879 PP632Q6XCG6 107 aa2.52□□□□□ -2.01
ZEB1-209ENST00000542879 KRTAP23-1A1A580 65 aa2.47□□□□□ -2.01
ZEB1-209ENST00000542879 CAMK2N1Q7Z7J9 78 aa2.46□□□□□ -2.02
ZEB1-209ENST00000542879 KRTAP4-8Q9BYQ9 185 aa2.43□□□□□ -2.02
ZEB1-209ENST00000542879 MUC2Q02817 5179 aa2.42□□□□□ -2.02
ZEB1-209ENST00000542879 TNP1P09430 55 aa2.41□□□□□ -2.02
ZEB1-209ENST00000542879 FAT4Q6V0I7 4981 aa2.36□□□□□ -2.03
ZEB1-209ENST00000542879 SPRR2GQ9BYE4 73 aa2.36□□□□□ -2.03
ZEB1-209ENST00000542879 PRO2289Q9P1D8 64 aa2.36□□□□□ -2.03
ZEB1-209ENST00000542879 RNF213Q63HN8 5207 aa2.36□□□□□ -2.03
ZEB1-209ENST00000542879 KRTAP19-1Q8IUB9 90 aa2.35□□□□□ -2.03
ZEB1-209ENST00000542879 UBR4Q5T4S7 5183 aa2.33□□□□□ -2.04
ZEB1-209ENST00000542879 KRTAP9-2Q9BYQ4 174 aa2.32□□□□□ -2.04
ZEB1-209ENST00000542879 KRTAP9-6A0A140TA67 174 aa2.3□□□□□ -2.04
ZEB1-209ENST00000542879 KRTAP9-1A8MXZ3 250 aaPredicted RBP2.3□□□□□ -2.04
ZEB1-209ENST00000542879 LCE3AQ5TA76 89 aa2.3□□□□□ -2.04
ZEB1-209ENST00000542879 KRTAP4-12Q9BQ66 201 aa2.28□□□□□ -2.05
ZEB1-209ENST00000542879 MT1HP80294 61 aa2.26□□□□□ -2.05
ZEB1-209ENST00000542879 KRTAP8-1Q8IUC2 63 aa2.26□□□□□ -2.05
ZEB1-209ENST00000542879 MT1FP04733 61 aa2.26□□□□□ -2.05
ZEB1-209ENST00000542879 KRTAP19-8Q3LI54 63 aa2.25□□□□□ -2.05
ZEB1-209ENST00000542879 KRTAP4-8A0A0G2JLE6 195 aa2.25□□□□□ -2.05
ZEB1-209ENST00000542879 MT2AP02795 61 aa2.25□□□□□ -2.05
ZEB1-209ENST00000542879 LCE3BQ5TA77 95 aa2.24□□□□□ -2.05
ZEB1-209ENST00000542879 KRTAP9-8Q9BYQ0 159 aa2.24□□□□□ -2.05
ZEB1-209ENST00000542879 KRTAP10-5P60370 271 aa2.23□□□□□ -2.05
ZEB1-209ENST00000542879 MT1XP80297 61 aa2.22□□□□□ -2.05
ZEB1-209ENST00000542879 MT1BP07438 61 aa2.22□□□□□ -2.05
ZEB1-209ENST00000542879 KRTAP9-9Q9BYP9 154 aa2.21□□□□□ -2.06
ZEB1-209ENST00000542879 KRTAP9-4Q9BYQ2 154 aa2.21□□□□□ -2.06
ZEB1-209ENST00000542879 INE1O15225 51 aa2.2□□□□□ -2.06
ZEB1-209ENST00000542879 KRTAP10-10P60014 251 aa2.2□□□□□ -2.06
ZEB1-209ENST00000542879 KRTAP4-7Q9BYR0 210 aa2.2□□□□□ -2.06
ZEB1-209ENST00000542879 KRTAP10-12P60413 245 aa2.2□□□□□ -2.06
ZEB1-209ENST00000542879 M0R2T5 61 aa2.19□□□□□ -2.06
ZEB1-209ENST00000542879 KRTAP12-3P60328 96 aa2.17□□□□□ -2.06
ZEB1-209ENST00000542879 KRTAP9-3Q9BYQ3 159 aa2.17□□□□□ -2.06
ZEB1-209ENST00000542879 LCE1DQ5T752 114 aa2.16□□□□□ -2.06
ZEB1-209ENST00000542879 KRTAP10-7P60409 375 aaPredicted RBP2.15□□□□□ -2.06
ZEB1-209ENST00000542879 KRTAP19-6Q3LI70 58 aa2.15□□□□□ -2.06
ZEB1-209ENST00000542879 KRTAP4-9Q9BYQ8 210 aa2.13□□□□□ -2.07
ZEB1-209ENST00000542879 USH2AO75445 5202 aa2.11□□□□□ -2.07
Retrieved 100 of 20,778 RNA–protein pairs in 12.5 ms