RNA–Protein interactions for RNA: ENST00000541578.5

SNHG1-217, Transcript of small nucleolar RNA host gene 1, humanhuman

TSL 3 BASIC

Gene SNHG1, Length 588 nt, Biotype lincRNA, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG1-217ENST00000541578 DEFB130AP0DP74 79 aa1.91□□□□□ -2.1
SNHG1-217ENST00000541578 HAMPP81172 84 aa1.91□□□□□ -2.1
SNHG1-217ENST00000541578 CSAG1Q6PB30 78 aa1.91□□□□□ -2.1
SNHG1-217ENST00000541578 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP1.91□□□□□ -2.1
SNHG1-217ENST00000541578 C9orf163Q8N9P6 203 aa1.91□□□□□ -2.1
SNHG1-217ENST00000541578 SPACA4Q8TDM5 124 aa1.91□□□□□ -2.1
SNHG1-217ENST00000541578 HMCN2Q8NDA2 5059 aa1.91□□□□□ -2.1
SNHG1-217ENST00000541578 NCR3O14931 201 aa1.9□□□□□ -2.11
SNHG1-217ENST00000541578 NDUFA1O15239 70 aa1.9□□□□□ -2.11
SNHG1-217ENST00000541578 LINC00308Q8TCZ7 52 aa1.9□□□□□ -2.11
SNHG1-217ENST00000541578 H0Y9P7 68 aa1.89□□□□□ -2.11
SNHG1-217ENST00000541578 CRIP1P50238 77 aa1.89□□□□□ -2.11
SNHG1-217ENST00000541578 C1orf137Q5JT78 98 aa1.89□□□□□ -2.11
SNHG1-217ENST00000541578 Q6ZRN7 208 aaPredicted RBP1.89□□□□□ -2.11
SNHG1-217ENST00000541578 ETDCA0A1B0GVM5 59 aa1.88□□□□□ -2.11
SNHG1-217ENST00000541578 IGKV2-29A2NJV5 120 aaPredicted RBP1.88□□□□□ -2.11
SNHG1-217ENST00000541578 Q8TAT8 98 aa1.88□□□□□ -2.11
SNHG1-217ENST00000541578 DMAC1Q96GE9 116 aa1.88□□□□□ -2.11
SNHG1-217ENST00000541578 IGKV2-40A0A087WW87 121 aaPredicted RBP1.87□□□□□ -2.11
SNHG1-217ENST00000541578 IGKV2D-40P01614 121 aaPredicted RBP1.87□□□□□ -2.11
SNHG1-217ENST00000541578 MGPP08493 103 aa1.87□□□□□ -2.11
SNHG1-217ENST00000541578 RPL37AP61513 92 aaKnown RBP1.87□□□□□ -2.11
SNHG1-217ENST00000541578 SPATA8Q6RVD6 105 aa1.87□□□□□ -2.11
SNHG1-217ENST00000541578 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa1.87□□□□□ -2.11
SNHG1-217ENST00000541578 KCNQ1DNQ9H478 68 aa1.87□□□□□ -2.11
SNHG1-217ENST00000541578 PRO0255Q9UI72 69 aa1.87□□□□□ -2.11
SNHG1-217ENST00000541578 A0A096LPF7 62 aa1.86□□□□□ -2.11
SNHG1-217ENST00000541578 UQCR11O14957 56 aa1.86□□□□□ -2.11
SNHG1-217ENST00000541578 HTN1P15515 57 aa1.86□□□□□ -2.11
SNHG1-217ENST00000541578 POLR2KP53803 58 aaKnown RBP1.86□□□□□ -2.11
SNHG1-217ENST00000541578 SPINK7P58062 85 aa1.86□□□□□ -2.11
SNHG1-217ENST00000541578 KRTAP26-1Q6PEX3 210 aa1.86□□□□□ -2.11
SNHG1-217ENST00000541578 Q6ZSA8 131 aa1.86□□□□□ -2.11
SNHG1-217ENST00000541578 NOP10Q9NPE3 64 aaKnown RBP1.86□□□□□ -2.11
SNHG1-217ENST00000541578 RNF213Q63HN8 5207 aa1.85□□□□□ -2.11
SNHG1-217ENST00000541578 A8MTW9 85 aa1.85□□□□□ -2.11
SNHG1-217ENST00000541578 SMIM11BQ8TCY0 68 aa1.85□□□□□ -2.11
SNHG1-217ENST00000541578 SPRR4Q96PI1 79 aa1.85□□□□□ -2.11
SNHG1-217ENST00000541578 IGKV2D-29A0A075B6S2 120 aaPredicted RBP1.84□□□□□ -2.11
SNHG1-217ENST00000541578 SPINK13Q1W4C9 94 aa1.84□□□□□ -2.11
SNHG1-217ENST00000541578 LRP2P98164 4655 aa1.83□□□□□ -2.12
SNHG1-217ENST00000541578 LINC01556Q5JQF7 62 aa1.83□□□□□ -2.12
SNHG1-217ENST00000541578 LRP1Q07954 4544 aaKnown RBP1.83□□□□□ -2.12
SNHG1-217ENST00000541578 FAT3Q8TDW7 4589 aa1.83□□□□□ -2.12
SNHG1-217ENST00000541578 TRGV1A0A0A0MS02 117 aa1.82□□□□□ -2.12
SNHG1-217ENST00000541578 LINC00959A0A1B0GUT2 108 aa1.82□□□□□ -2.12
SNHG1-217ENST00000541578 TRBV6-4A0A1B0GX49 114 aa1.82□□□□□ -2.12
SNHG1-217ENST00000541578 MT1HL1P0DM35 61 aa1.82□□□□□ -2.12
SNHG1-217ENST00000541578 RNASE3P12724 160 aaKnown RBP1.82□□□□□ -2.12
SNHG1-217ENST00000541578 COX7BP24311 80 aa1.82□□□□□ -2.12
SNHG1-217ENST00000541578 RPL39P62891 51 aaKnown RBP1.82□□□□□ -2.12
SNHG1-217ENST00000541578 KRTAP13-4Q3LI77 160 aa1.82□□□□□ -2.12
SNHG1-217ENST00000541578 RPL39LQ96EH5 51 aaKnown RBP1.82□□□□□ -2.12
SNHG1-217ENST00000541578 PKHD1L1Q86WI1 4243 aa1.82□□□□□ -2.12
SNHG1-217ENST00000541578 KRTAP10-4P60372 401 aaPredicted RBP1.81□□□□□ -2.12
SNHG1-217ENST00000541578 SPINK6Q6UWN8 80 aa1.81□□□□□ -2.12
SNHG1-217ENST00000541578 M0QY20 66 aa1.8□□□□□ -2.12
SNHG1-217ENST00000541578 LINC00158P58513 81 aa1.8□□□□□ -2.12
SNHG1-217ENST00000541578 KRTAP12-1P59990 96 aa1.8□□□□□ -2.12
SNHG1-217ENST00000541578 COX17Q14061 63 aa1.8□□□□□ -2.12
SNHG1-217ENST00000541578 PCOTHQ58A44 107 aa1.8□□□□□ -2.12
SNHG1-217ENST00000541578 LELP1Q5T871 98 aa1.8□□□□□ -2.12
SNHG1-217ENST00000541578 WFDC10BQ8IUB3 73 aa1.8□□□□□ -2.12
SNHG1-217ENST00000541578 KRTAP13-1Q8IUC0 172 aa1.8□□□□□ -2.12
SNHG1-217ENST00000541578 CRCT1Q9UGL9 99 aa1.8□□□□□ -2.12
SNHG1-217ENST00000541578 IGKV3OR2-268A0A0C4DH90 116 aa1.79□□□□□ -2.12
SNHG1-217ENST00000541578 DEFB1P60022 68 aa1.79□□□□□ -2.12
SNHG1-217ENST00000541578 LINC00575Q6W349 94 aa1.79□□□□□ -2.12
SNHG1-217ENST00000541578 Q6ZQY7 126 aa1.79□□□□□ -2.12
SNHG1-217ENST00000541578 TNXBP22105 4242 aa1.79□□□□□ -2.12
SNHG1-217ENST00000541578 DNAH8Q96JB1 4490 aa1.79□□□□□ -2.12
SNHG1-217ENST00000541578 CDKN2A-AS1Q9UH64 79 aa1.78□□□□□ -2.12
SNHG1-217ENST00000541578 A0A1B0GU69 56 aa1.77□□□□□ -2.13
SNHG1-217ENST00000541578 FAT4Q6V0I7 4981 aa1.76□□□□□ -2.13
SNHG1-217ENST00000541578 Q8IZM0 81 aa1.76□□□□□ -2.13
SNHG1-217ENST00000541578 LINC00472Q9H8W2 130 aa1.76□□□□□ -2.13
SNHG1-217ENST00000541578 KRTAP12-3P60328 96 aa1.75□□□□□ -2.13
SNHG1-217ENST00000541578 KRTAP6-3Q3LI67 103 aa1.74□□□□□ -2.13
SNHG1-217ENST00000541578 ANGP03950 147 aaKnown RBP1.73□□□□□ -2.13
SNHG1-217ENST00000541578 UNQ6190/PRO20217Q6UXQ8 127 aa1.73□□□□□ -2.13
SNHG1-217ENST00000541578 TP53AIP1Q9HCN2 124 aa1.73□□□□□ -2.13
SNHG1-217ENST00000541578 HMCN1Q96RW7 5635 aa1.72□□□□□ -2.13
SNHG1-217ENST00000541578 IGLV5-48A0A075B6I7 105 aa1.72□□□□□ -2.13
SNHG1-217ENST00000541578 ACYP2P14621 99 aa1.72□□□□□ -2.13
SNHG1-217ENST00000541578 KRTAP12-4P60329 112 aa1.72□□□□□ -2.13
SNHG1-217ENST00000541578 Q96NJ1 140 aa1.72□□□□□ -2.13
SNHG1-217ENST00000541578 MUC2Q02817 5179 aa1.71□□□□□ -2.13
SNHG1-217ENST00000541578 COX6A2Q02221 97 aa1.71□□□□□ -2.14
SNHG1-217ENST00000541578 KRTAP21-2Q3LI59 83 aa1.71□□□□□ -2.14
SNHG1-217ENST00000541578 LPAP08519 4548 aa1.71□□□□□ -2.14
SNHG1-217ENST00000541578 K7EQZ3 153 aa1.7□□□□□ -2.14
SNHG1-217ENST00000541578 TOMM7Q9P0U1 55 aa1.7□□□□□ -2.14
SNHG1-217ENST00000541578 GVQW2A0A096LPI5 108 aaPredicted RBP1.69□□□□□ -2.14
SNHG1-217ENST00000541578 FSIP2Q5CZC0 6907 aa1.67□□□□□ -2.14
SNHG1-217ENST00000541578 INE1O15225 51 aa1.67□□□□□ -2.14
SNHG1-217ENST00000541578 SSBP3-AS1Q7Z2R9 100 aa1.67□□□□□ -2.14
SNHG1-217ENST00000541578 WFDC13Q8IUB5 93 aa1.67□□□□□ -2.14
SNHG1-217ENST00000541578 C6orf48Q9UBA6 75 aa1.66□□□□□ -2.14
SNHG1-217ENST00000541578 A0A096LNI7 61 aa1.65□□□□□ -2.15
SNHG1-217ENST00000541578 CLPSL2Q6UWE3 100 aa1.64□□□□□ -2.15
Retrieved 100 of 20,778 RNA–protein pairs in 7.8 ms