RNA–Protein interactions for RNA: ENST00000541377.5

CLASP1-215, Transcript of cytoplasmic linker associated protein 1, humanhuman

TSL 5 BASIC

Gene CLASP1, Length 7,909 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLASP1-215ENST00000541377 BSNQ9UPA5 3926 aa3.73□□□□□ -1.81
CLASP1-215ENST00000541377 ALMS1Q8TCU4 4167 aa3.72□□□□□ -1.81
CLASP1-215ENST00000541377 SPRR2EP22531 72 aa3.67□□□□□ -1.82
CLASP1-215ENST00000541377 SPRR2BP35325 72 aa3.67□□□□□ -1.82
CLASP1-215ENST00000541377 SPRR2AP35326 72 aa3.67□□□□□ -1.82
CLASP1-215ENST00000541377 KRTAP3-3Q9BYR6 98 aa3.67□□□□□ -1.82
CLASP1-215ENST00000541377 KRTAP3-2Q9BYR7 98 aa3.64□□□□□ -1.83
CLASP1-215ENST00000541377 DNAH1Q9P2D7 4330 aa3.62□□□□□ -1.83
CLASP1-215ENST00000541377 KRTAP10-4P60372 401 aaPredicted RBP3.61□□□□□ -1.83
CLASP1-215ENST00000541377 MT1HP80294 61 aa3.57□□□□□ -1.84
CLASP1-215ENST00000541377 SPRR2DP22532 72 aa3.57□□□□□ -1.84
CLASP1-215ENST00000541377 ANK3Q12955 4377 aaKnown RBP3.56□□□□□ -1.84
CLASP1-215ENST00000541377 HUWE1Q7Z6Z7 4374 aaKnown RBP3.55□□□□□ -1.84
CLASP1-215ENST00000541377 KRTAP12-4P60329 112 aa3.51□□□□□ -1.85
CLASP1-215ENST00000541377 LCE2BO14633 110 aa3.5□□□□□ -1.85
CLASP1-215ENST00000541377 LYSTQ99698 3801 aa3.48□□□□□ -1.85
CLASP1-215ENST00000541377 KRTAP19-5Q3LI72 72 aa3.48□□□□□ -1.85
CLASP1-215ENST00000541377 MT2AP02795 61 aa3.44□□□□□ -1.86
CLASP1-215ENST00000541377 VPS13BQ7Z7G8 4022 aa3.43□□□□□ -1.86
CLASP1-215ENST00000541377 ZNF469Q96JG9 3925 aaPredicted RBP3.42□□□□□ -1.86
CLASP1-215ENST00000541377 LCE3BQ5TA77 95 aa3.41□□□□□ -1.86
CLASP1-215ENST00000541377 LCE3CQ5T5A8 94 aa3.41□□□□□ -1.86
CLASP1-215ENST00000541377 DNAH2Q9P225 4427 aa3.4□□□□□ -1.87
CLASP1-215ENST00000541377 SPRR2GQ9BYE4 73 aa3.39□□□□□ -1.87
CLASP1-215ENST00000541377 DNAH7Q8WXX0 4024 aa3.39□□□□□ -1.87
CLASP1-215ENST00000541377 SPRR5A0A1B0GTR4 108 aa3.36□□□□□ -1.87
CLASP1-215ENST00000541377 LCE2CQ5TA81 110 aa3.36□□□□□ -1.87
CLASP1-215ENST00000541377 KRTAP4-1Q9BYQ7 146 aa3.35□□□□□ -1.87
CLASP1-215ENST00000541377 MT1FP04733 61 aa3.34□□□□□ -1.87
CLASP1-215ENST00000541377 ANK2Q01484 3957 aa3.32□□□□□ -1.88
CLASP1-215ENST00000541377 KRTAP19-4Q3LI73 84 aa3.32□□□□□ -1.88
CLASP1-215ENST00000541377 KMT2AQ03164 3969 aa3.31□□□□□ -1.88
CLASP1-215ENST00000541377 LCE2DQ5TA82 110 aaPredicted RBP3.3□□□□□ -1.88
CLASP1-215ENST00000541377 CMYA5Q8N3K9 4069 aa3.27□□□□□ -1.89
CLASP1-215ENST00000541377 DNAH3Q8TD57 4116 aa3.26□□□□□ -1.89
CLASP1-215ENST00000541377 FAT2Q9NYQ8 4349 aa3.24□□□□□ -1.89
CLASP1-215ENST00000541377 MT1GP13640 62 aa3.23□□□□□ -1.89
CLASP1-215ENST00000541377 FRAS1Q86XX4 4008 aa3.23□□□□□ -1.89
CLASP1-215ENST00000541377 HECTD4Q9Y4D8 3996 aa3.2□□□□□ -1.9
CLASP1-215ENST00000541377 MT4P47944 62 aa3.19□□□□□ -1.9
CLASP1-215ENST00000541377 DNAH9Q9NYC9 4486 aa3.18□□□□□ -1.9
CLASP1-215ENST00000541377 KRTAP19-1Q8IUB9 90 aa3.16□□□□□ -1.9
CLASP1-215ENST00000541377 DNAH17Q9UFH2 4485 aa3.14□□□□□ -1.91
CLASP1-215ENST00000541377 LCE3DQ9BYE3 92 aa3.14□□□□□ -1.91
CLASP1-215ENST00000541377 DNHD1Q96M86 4753 aa3.13□□□□□ -1.91
CLASP1-215ENST00000541377 DNAH6Q9C0G6 4158 aa3.12□□□□□ -1.91
CLASP1-215ENST00000541377 DNAH10Q8IVF4 4471 aa3.11□□□□□ -1.91
CLASP1-215ENST00000541377 LCE3EQ5T5B0 92 aa3.11□□□□□ -1.91
CLASP1-215ENST00000541377 PRKDCP78527 4128 aaKnown RBP3.07□□□□□ -1.92
CLASP1-215ENST00000541377 PLECQ15149 4684 aaKnown RBP3.06□□□□□ -1.92
CLASP1-215ENST00000541377 LCE1BQ5T7P3 118 aa3.06□□□□□ -1.92
CLASP1-215ENST00000541377 DNAH5Q8TE73 4624 aa3.06□□□□□ -1.92
CLASP1-215ENST00000541377 FLGP20930 4061 aaPredicted RBP3.03□□□□□ -1.92
CLASP1-215ENST00000541377 KRTAP9-2Q9BYQ4 174 aa3.03□□□□□ -1.92
CLASP1-215ENST00000541377 LCE1DQ5T752 114 aa3.03□□□□□ -1.92
CLASP1-215ENST00000541377 DYNC2H1Q8NCM8 4307 aaKnown RBP3.02□□□□□ -1.93
CLASP1-215ENST00000541377 KRTAP19-8Q3LI54 63 aa3.02□□□□□ -1.93
CLASP1-215ENST00000541377 KIAA1109Q2LD37 5005 aa3.01□□□□□ -1.93
CLASP1-215ENST00000541377 KRTAP4-8A0A0G2JLE6 195 aa2.99□□□□□ -1.93
CLASP1-215ENST00000541377 KRTAP4-8Q9BYQ9 185 aa2.99□□□□□ -1.93
CLASP1-215ENST00000541377 DNAH11Q96DT5 4516 aa2.99□□□□□ -1.93
CLASP1-215ENST00000541377 PKHD1P08F94 4074 aa2.99□□□□□ -1.93
CLASP1-215ENST00000541377 MT1XP80297 61 aa2.99□□□□□ -1.93
CLASP1-215ENST00000541377 PKHD1L1Q86WI1 4243 aa2.98□□□□□ -1.93
CLASP1-215ENST00000541377 DNAH8Q96JB1 4490 aa2.98□□□□□ -1.93
CLASP1-215ENST00000541377 KRTAP17-1Q9BYP8 105 aa2.98□□□□□ -1.93
CLASP1-215ENST00000541377 DYNC1H1Q14204 4646 aaKnown RBP2.98□□□□□ -1.93
CLASP1-215ENST00000541377 KRTAP20-1Q3LI63 56 aa2.97□□□□□ -1.93
CLASP1-215ENST00000541377 KRTAP19-3Q7Z4W3 81 aa2.97□□□□□ -1.93
CLASP1-215ENST00000541377 VPS13DQ5THJ4 4388 aa2.96□□□□□ -1.94
CLASP1-215ENST00000541377 KRTAP9-6A0A140TA67 174 aa2.95□□□□□ -1.94
CLASP1-215ENST00000541377 MT3P25713 68 aa2.94□□□□□ -1.94
CLASP1-215ENST00000541377 LCE5AQ5TCM9 118 aa2.94□□□□□ -1.94
CLASP1-215ENST00000541377 RYR1P21817 5038 aa2.94□□□□□ -1.94
CLASP1-215ENST00000541377 LRP1BQ9NZR2 4599 aa2.93□□□□□ -1.94
CLASP1-215ENST00000541377 LRP1Q07954 4544 aaKnown RBP2.93□□□□□ -1.94
CLASP1-215ENST00000541377 FAT1Q14517 4588 aa2.91□□□□□ -1.94
CLASP1-215ENST00000541377 STARD9Q9P2P6 4700 aa2.9□□□□□ -1.95
CLASP1-215ENST00000541377 KRTAP9-8Q9BYQ0 159 aa2.9□□□□□ -1.95
CLASP1-215ENST00000541377 MT1BP07438 61 aa2.87□□□□□ -1.95
CLASP1-215ENST00000541377 MT1LQ93083 61 aa2.85□□□□□ -1.95
CLASP1-215ENST00000541377 KRTAP19-6Q3LI70 58 aa2.84□□□□□ -1.95
CLASP1-215ENST00000541377 KRTAP9-3Q9BYQ3 159 aa2.84□□□□□ -1.95
CLASP1-215ENST00000541377 RYR2Q92736 4967 aa2.84□□□□□ -1.95
CLASP1-215ENST00000541377 SACSQ9NZJ4 4579 aa2.84□□□□□ -1.96
CLASP1-215ENST00000541377 LCE1CQ5T751 118 aa2.83□□□□□ -1.96
CLASP1-215ENST00000541377 LCE1EQ5T753 118 aa2.83□□□□□ -1.96
CLASP1-215ENST00000541377 LCE1FQ5T754 118 aa2.83□□□□□ -1.96
CLASP1-215ENST00000541377 LCE1AQ5T7P2 110 aa2.83□□□□□ -1.96
CLASP1-215ENST00000541377 APOBP04114 4563 aaKnown RBP2.83□□□□□ -1.96
CLASP1-215ENST00000541377 RYR3Q15413 4870 aa2.82□□□□□ -1.96
CLASP1-215ENST00000541377 HYDINQ4G0P3 5121 aa2.82□□□□□ -1.96
CLASP1-215ENST00000541377 KRTAP9-7A8MTY7 169 aa2.8□□□□□ -1.96
CLASP1-215ENST00000541377 PRM1P04553 51 aa2.78□□□□□ -1.97
CLASP1-215ENST00000541377 PKD1P98161 4303 aa2.77□□□□□ -1.97
CLASP1-215ENST00000541377 MT1EP04732 61 aa2.76□□□□□ -1.97
CLASP1-215ENST00000541377 FAT3Q8TDW7 4589 aa2.75□□□□□ -1.97
CLASP1-215ENST00000541377 MYCBP2O75592 4640 aa2.75□□□□□ -1.97
CLASP1-215ENST00000541377 MT1MQ8N339 61 aa2.73□□□□□ -1.97
CLASP1-215ENST00000541377 KRTAP4-7Q9BYR0 210 aa2.73□□□□□ -1.97
Retrieved 100 of 20,778 RNA–protein pairs in 122.4 ms