RNA–Protein interactions for RNA: ENST00000541225.5

ABCA8-204, Transcript of ATP binding cassette subfamily A member 8, humanhuman

TSL 2

Gene ABCA8, Length 3,657 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCA8-204ENST00000541225 RP1L1Q8IWN7 2480 aaPredicted RBP2.32□□□□□ -2.04
ABCA8-204ENST00000541225 SPTA1P02549 2419 aa2.32□□□□□ -2.04
ABCA8-204ENST00000541225 JMJD1CQ15652 2540 aa2.32□□□□□ -2.04
ABCA8-204ENST00000541225 HTN3P15516 51 aa2.31□□□□□ -2.04
ABCA8-204ENST00000541225 C2CD3Q4AC94 2353 aa2.31□□□□□ -2.04
ABCA8-204ENST00000541225 CSPG4Q6UVK1 2322 aa2.3□□□□□ -2.04
ABCA8-204ENST00000541225 NAV2Q8IVL1 2488 aa2.3□□□□□ -2.04
ABCA8-204ENST00000541225 LRP2P98164 4655 aa2.29□□□□□ -2.04
ABCA8-204ENST00000541225 BIRC6Q9NR09 4857 aa2.29□□□□□ -2.04
ABCA8-204ENST00000541225 LCE3BQ5TA77 95 aa2.28□□□□□ -2.04
ABCA8-204ENST00000541225 M0QZ58 72 aa2.28□□□□□ -2.05
ABCA8-204ENST00000541225 SPINK6Q6UWN8 80 aa2.28□□□□□ -2.05
ABCA8-204ENST00000541225 LRRK2Q5S007 2527 aa2.27□□□□□ -2.05
ABCA8-204ENST00000541225 A0A1B0GVY2 172 aa2.27□□□□□ -2.05
ABCA8-204ENST00000541225 KMT2CQ8NEZ4 4911 aaKnown RBP2.27□□□□□ -2.05
ABCA8-204ENST00000541225 C10orf95Q9H7T3 257 aa2.27□□□□□ -2.05
ABCA8-204ENST00000541225 KRTAP10-2P60368 255 aa2.26□□□□□ -2.05
ABCA8-204ENST00000541225 KRTAP10-8P60410 259 aa2.26□□□□□ -2.05
ABCA8-204ENST00000541225 NBEAL1Q6ZS30 2694 aa2.26□□□□□ -2.05
ABCA8-204ENST00000541225 MUC6Q6W4X9 2439 aa2.26□□□□□ -2.05
ABCA8-204ENST00000541225 KRTAP4-8A0A0G2JLE6 195 aa2.26□□□□□ -2.05
ABCA8-204ENST00000541225 HIVEP2P31629 2446 aa2.25□□□□□ -2.05
ABCA8-204ENST00000541225 PRO2289Q9P1D8 64 aa2.24□□□□□ -2.05
ABCA8-204ENST00000541225 LCE4AQ5TA78 99 aa2.24□□□□□ -2.05
ABCA8-204ENST00000541225 FLNBO75369 2602 aaKnown RBP2.24□□□□□ -2.05
ABCA8-204ENST00000541225 ITPR2Q14571 2701 aa2.24□□□□□ -2.05
ABCA8-204ENST00000541225 PP632Q6XCG6 107 aa2.23□□□□□ -2.05
ABCA8-204ENST00000541225 ZFYVE26Q68DK2 2539 aa2.23□□□□□ -2.05
ABCA8-204ENST00000541225 TPRP12270 2363 aaKnown RBP2.23□□□□□ -2.05
ABCA8-204ENST00000541225 IGF2RP11717 2491 aa2.23□□□□□ -2.05
ABCA8-204ENST00000541225 MYO9AB2RTY4 2548 aa2.22□□□□□ -2.05
ABCA8-204ENST00000541225 POLQO75417 2590 aa2.22□□□□□ -2.05
ABCA8-204ENST00000541225 KRTAP10-1P60331 282 aa2.22□□□□□ -2.05
ABCA8-204ENST00000541225 CRIPTQ9P021 101 aa2.21□□□□□ -2.06
ABCA8-204ENST00000541225 R4GN34 69 aa2.21□□□□□ -2.06
ABCA8-204ENST00000541225 HMCN2Q8NDA2 5059 aa2.2□□□□□ -2.06
ABCA8-204ENST00000541225 SETD2Q9BYW2 2564 aaPredicted RBP2.19□□□□□ -2.06
ABCA8-204ENST00000541225 KRTAP9-7A8MTY7 169 aa2.19□□□□□ -2.06
ABCA8-204ENST00000541225 MYO18BQ8IUG5 2567 aa2.19□□□□□ -2.06
ABCA8-204ENST00000541225 SPG11Q96JI7 2443 aa2.18□□□□□ -2.06
ABCA8-204ENST00000541225 PLAC4Q8WY50 150 aa2.18□□□□□ -2.06
ABCA8-204ENST00000541225 SONP18583 2426 aaKnown RBP2.17□□□□□ -2.06
ABCA8-204ENST00000541225 KRTAP4-7Q9BYR0 210 aa2.17□□□□□ -2.06
ABCA8-204ENST00000541225 LCE1DQ5T752 114 aa2.17□□□□□ -2.06
ABCA8-204ENST00000541225 INE1O15225 51 aa2.15□□□□□ -2.07
ABCA8-204ENST00000541225 COL6A5A8TX70 2615 aa2.14□□□□□ -2.07
ABCA8-204ENST00000541225 KRTAP4-9Q9BYQ8 210 aa2.14□□□□□ -2.07
ABCA8-204ENST00000541225 ATRQ13535 2644 aa2.14□□□□□ -2.07
ABCA8-204ENST00000541225 J3QKU1 62 aa2.13□□□□□ -2.07
ABCA8-204ENST00000541225 NOTCH2Q04721 2471 aa2.13□□□□□ -2.07
ABCA8-204ENST00000541225 KRTAP4-2Q9BYR5 136 aa2.12□□□□□ -2.07
ABCA8-204ENST00000541225 FLG2Q5D862 2391 aaPredicted RBP2.12□□□□□ -2.07
ABCA8-204ENST00000541225 CCDC168Q8NDH2 2452 aa2.11□□□□□ -2.07
ABCA8-204ENST00000541225 KRTAP17-1Q9BYP8 105 aa2.11□□□□□ -2.07
ABCA8-204ENST00000541225 MT1HL1P0DM35 61 aa2.11□□□□□ -2.07
ABCA8-204ENST00000541225 KRTAP9-3Q9BYQ3 159 aa2.1□□□□□ -2.07
ABCA8-204ENST00000541225 ABCA13Q86UQ4 5058 aa2.1□□□□□ -2.07
ABCA8-204ENST00000541225 Q5VSD8 79 aa2.1□□□□□ -2.07
ABCA8-204ENST00000541225 KRTAP10-12P60413 245 aa2.09□□□□□ -2.07
ABCA8-204ENST00000541225 PCLOQ9Y6V0 5065 aa2.07□□□□□ -2.08
ABCA8-204ENST00000541225 KRTAP4-11Q9BYQ6 195 aa2.07□□□□□ -2.08
ABCA8-204ENST00000541225 ABCA12Q86UK0 2595 aa2.06□□□□□ -2.08
ABCA8-204ENST00000541225 KRTAP8-1Q8IUC2 63 aa2.06□□□□□ -2.08
ABCA8-204ENST00000541225 STAB2Q8WWQ8 2551 aa2.06□□□□□ -2.08
ABCA8-204ENST00000541225 SPRR2GQ9BYE4 73 aa2.06□□□□□ -2.08
ABCA8-204ENST00000541225 KRTAP10-5P60370 271 aa2.05□□□□□ -2.08
ABCA8-204ENST00000541225 LCE5AQ5TCM9 118 aa2.05□□□□□ -2.08
ABCA8-204ENST00000541225 UBE2DNLQ8IWF7 75 aa2.05□□□□□ -2.08
ABCA8-204ENST00000541225 EPPK1P58107 5090 aaKnown RBP2.04□□□□□ -2.08
ABCA8-204ENST00000541225 MTORP42345 2549 aa2.03□□□□□ -2.08
ABCA8-204ENST00000541225 RIF1Q5UIP0 2472 aaKnown RBP2.02□□□□□ -2.09
ABCA8-204ENST00000541225 F8P00451 2351 aa2.02□□□□□ -2.09
ABCA8-204ENST00000541225 KRTAP2-3P0C7H8 128 aa2.02□□□□□ -2.09
ABCA8-204ENST00000541225 KRTAP4-5Q9BYR2 181 aa2.02□□□□□ -2.09
ABCA8-204ENST00000541225 KRTAP2-4Q9BYR9 128 aa2.02□□□□□ -2.09
ABCA8-204ENST00000541225 KRTAP2-1Q9BYU5 128 aa2.02□□□□□ -2.09
ABCA8-204ENST00000541225 NOTCH1P46531 2555 aa2.02□□□□□ -2.09
ABCA8-204ENST00000541225 C9orf92A6NGG3 77 aa2.01□□□□□ -2.09
ABCA8-204ENST00000541225 KRTAP19-4Q3LI73 84 aa2.01□□□□□ -2.09
ABCA8-204ENST00000541225 AHNAKQ09666 5890 aaKnown RBP2□□□□□ -2.09
ABCA8-204ENST00000541225 KRTAP10-10P60014 251 aa1.99□□□□□ -2.09
ABCA8-204ENST00000541225 KRTAP19-8Q3LI54 63 aa1.99□□□□□ -2.09
ABCA8-204ENST00000541225 KRTAP4-1Q9BYQ7 146 aa1.99□□□□□ -2.09
ABCA8-204ENST00000541225 UBR4Q5T4S7 5183 aa1.98□□□□□ -2.09
ABCA8-204ENST00000541225 KRTAP21-3Q3LHN1 58 aa1.98□□□□□ -2.09
ABCA8-204ENST00000541225 STAB1Q9NY15 2570 aa1.98□□□□□ -2.09
ABCA8-204ENST00000541225 MUC5BQ9HC84 5762 aaPredicted RBP1.96□□□□□ -2.1
ABCA8-204ENST00000541225 ACACBO00763 2458 aa1.94□□□□□ -2.1
ABCA8-204ENST00000541225 FAT4Q6V0I7 4981 aa1.94□□□□□ -2.1
ABCA8-204ENST00000541225 ACANP16112 2415 aa1.94□□□□□ -2.1
ABCA8-204ENST00000541225 A0A0D9SG42 100 aa1.93□□□□□ -2.1
ABCA8-204ENST00000541225 HMCN1Q96RW7 5635 aa1.93□□□□□ -2.1
ABCA8-204ENST00000541225 MGAM2Q2M2H8 2515 aa1.93□□□□□ -2.1
ABCA8-204ENST00000541225 KRTAP2-2Q9BYT5 123 aa1.92□□□□□ -2.1
ABCA8-204ENST00000541225 KRTAP10-7P60409 375 aaPredicted RBP1.89□□□□□ -2.11
ABCA8-204ENST00000541225 KRTAP19-5Q3LI72 72 aa1.89□□□□□ -2.11
ABCA8-204ENST00000541225 FASNP49327 2511 aaKnown RBP1.89□□□□□ -2.11
ABCA8-204ENST00000541225 SMR3BP02814 79 aaPredicted RBP1.87□□□□□ -2.11
ABCA8-204ENST00000541225 TNP1P09430 55 aa1.86□□□□□ -2.11
ABCA8-204ENST00000541225 MT1XP80297 61 aa1.86□□□□□ -2.11
Retrieved 100 of 20,778 RNA–protein pairs in 109.9 ms