RNA–Protein interactions for RNA: ENST00000540904.1

SNHG1-215, Transcript of small nucleolar RNA host gene 1, humanhuman

TSL 5

Gene SNHG1, Length 594 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG1-215ENST00000540904 CRCT1Q9UGL9 99 aa4.46□□□□□ -1.7
SNHG1-215ENST00000540904 MT1FP04733 61 aa4.45□□□□□ -1.7
SNHG1-215ENST00000540904 KRTAP10-10P60014 251 aa4.45□□□□□ -1.7
SNHG1-215ENST00000540904 A0A087WVE0 104 aa4.43□□□□□ -1.7
SNHG1-215ENST00000540904 TRAV22A0A0B4J277 110 aa4.43□□□□□ -1.7
SNHG1-215ENST00000540904 ANAPC13Q9BS18 74 aa4.42□□□□□ -1.7
SNHG1-215ENST00000540904 UQCRQO14949 82 aa4.41□□□□□ -1.7
SNHG1-215ENST00000540904 C1orf64Q8NEQ6 169 aa4.41□□□□□ -1.7
SNHG1-215ENST00000540904 KRTAP3-1Q9BYR8 98 aa4.4□□□□□ -1.71
SNHG1-215ENST00000540904 CYP4F30PQ9H0H9 118 aa4.4□□□□□ -1.71
SNHG1-215ENST00000540904 FAM236AA0A1B0GUQ0 79 aa4.39□□□□□ -1.71
SNHG1-215ENST00000540904 FAM236BA0A1B0GV22 79 aa4.39□□□□□ -1.71
SNHG1-215ENST00000540904 FSIP2Q5CZC0 6907 aa4.38□□□□□ -1.71
SNHG1-215ENST00000540904 LOC101927531A0A1B0GV80 90 aa4.38□□□□□ -1.71
SNHG1-215ENST00000540904 H0Y9P7 68 aa4.38□□□□□ -1.71
SNHG1-215ENST00000540904 ATOX1O00244 68 aa4.38□□□□□ -1.71
SNHG1-215ENST00000540904 C5orf47Q569G3 176 aa4.37□□□□□ -1.71
SNHG1-215ENST00000540904 S4R3F8 94 aa4.36□□□□□ -1.71
SNHG1-215ENST00000540904 SVIPQ8NHG7 77 aa4.35□□□□□ -1.71
SNHG1-215ENST00000540904 LCA10Q71F78 164 aa4.33□□□□□ -1.72
SNHG1-215ENST00000540904 OCR1Q9BZK8 76 aa4.33□□□□□ -1.72
SNHG1-215ENST00000540904 SMIM20Q8N5G0 67 aa4.32□□□□□ -1.72
SNHG1-215ENST00000540904 LINC00208Q96KT6 92 aa4.32□□□□□ -1.72
SNHG1-215ENST00000540904 CSAG1Q6PB30 78 aa4.31□□□□□ -1.72
SNHG1-215ENST00000540904 MP68P56378 58 aa4.3□□□□□ -1.72
SNHG1-215ENST00000540904 SERP2Q8N6R1 65 aa4.3□□□□□ -1.72
SNHG1-215ENST00000540904 COX7CP15954 63 aa4.29□□□□□ -1.72
SNHG1-215ENST00000540904 KLKP1Q107X0 134 aa4.28□□□□□ -1.72
SNHG1-215ENST00000540904 CCDC179H3BU77 68 aa4.27□□□□□ -1.73
SNHG1-215ENST00000540904 TRAV7A0A075B6U4 112 aa4.26□□□□□ -1.73
SNHG1-215ENST00000540904 USH2AO75445 5202 aa4.26□□□□□ -1.73
SNHG1-215ENST00000540904 A8MUN3 132 aa4.24□□□□□ -1.73
SNHG1-215ENST00000540904 H3BPC8 53 aa4.24□□□□□ -1.73
SNHG1-215ENST00000540904 NDUFC1O43677 76 aa4.22□□□□□ -1.73
SNHG1-215ENST00000540904 TMEM258P61165 79 aa4.18□□□□□ -1.74
SNHG1-215ENST00000540904 C20orf197Q8N268 126 aa4.18□□□□□ -1.74
SNHG1-215ENST00000540904 SSPOA2VEC9 5147 aa4.18□□□□□ -1.74
SNHG1-215ENST00000540904 KRTAP19-6Q3LI70 58 aa4.16□□□□□ -1.74
SNHG1-215ENST00000540904 DMAC1Q96GE9 116 aa4.15□□□□□ -1.75
SNHG1-215ENST00000540904 SPRR2GQ9BYE4 73 aa4.15□□□□□ -1.75
SNHG1-215ENST00000540904 H0YAA0 97 aa4.13□□□□□ -1.75
SNHG1-215ENST00000540904 ATP5EP56381 51 aaPredicted RBP4.13□□□□□ -1.75
SNHG1-215ENST00000540904 ADM2Q7Z4H4 148 aa4.13□□□□□ -1.75
SNHG1-215ENST00000540904 FCGBPQ9Y6R7 5405 aaPredicted RBP4.13□□□□□ -1.75
SNHG1-215ENST00000540904 Q5VV11 94 aa4.12□□□□□ -1.75
SNHG1-215ENST00000540904 CRIPTQ9P021 101 aa4.12□□□□□ -1.75
SNHG1-215ENST00000540904 SNURFQ9Y675 71 aa4.12□□□□□ -1.75
SNHG1-215ENST00000540904 MT1BP07438 61 aa4.1□□□□□ -1.75
SNHG1-215ENST00000540904 KRTAP19-8Q3LI54 63 aa4.1□□□□□ -1.75
SNHG1-215ENST00000540904 H7BZZ5 65 aa4.09□□□□□ -1.75
SNHG1-215ENST00000540904 CYSTM1Q9H1C7 97 aa4.09□□□□□ -1.75
SNHG1-215ENST00000540904 ACYP2P14621 99 aa4.08□□□□□ -1.76
SNHG1-215ENST00000540904 RPS28P62857 69 aaKnown RBP4.07□□□□□ -1.76
SNHG1-215ENST00000540904 A6NN06 94 aa4.04□□□□□ -1.76
SNHG1-215ENST00000540904 P0C880 135 aa4.04□□□□□ -1.76
SNHG1-215ENST00000540904 SERP1Q9Y6X1 66 aa4.04□□□□□ -1.76
SNHG1-215ENST00000540904 CHKB-CPT1BH3BT56 60 aa4.02□□□□□ -1.77
SNHG1-215ENST00000540904 KRTAP15-1Q3LI76 137 aa4.01□□□□□ -1.77
SNHG1-215ENST00000540904 SPANXA2-OT1Q8N9U9 137 aa4.01□□□□□ -1.77
SNHG1-215ENST00000540904 SPTSSBQ8NFR3 76 aa4.01□□□□□ -1.77
SNHG1-215ENST00000540904 R4GN34 69 aa4.01□□□□□ -1.77
SNHG1-215ENST00000540904 KRTAP10-5P60370 271 aa3.99□□□□□ -1.77
SNHG1-215ENST00000540904 M0QZ58 72 aa3.98□□□□□ -1.77
SNHG1-215ENST00000540904 SMIM26A0A096LP01 95 aa3.95□□□□□ -1.78
SNHG1-215ENST00000540904 LINC01554Q52M75 96 aa3.94□□□□□ -1.78
SNHG1-215ENST00000540904 PLAC4Q8WY50 150 aa3.94□□□□□ -1.78
SNHG1-215ENST00000540904 MACF1Q9UPN3 7388 aaKnown RBP3.92□□□□□ -1.78
SNHG1-215ENST00000540904 COA5Q86WW8 74 aa3.91□□□□□ -1.78
SNHG1-215ENST00000540904 KRTAP6-3Q3LI67 103 aa3.89□□□□□ -1.79
SNHG1-215ENST00000540904 PRO2289Q9P1D8 64 aa3.89□□□□□ -1.79
SNHG1-215ENST00000540904 V9GYY9 64 aa3.88□□□□□ -1.79
SNHG1-215ENST00000540904 MT1XP80297 61 aa3.87□□□□□ -1.79
SNHG1-215ENST00000540904 Q1T7F1 81 aa3.84□□□□□ -1.79
SNHG1-215ENST00000540904 SYNE2Q8WXH0 6885 aaKnown RBP3.84□□□□□ -1.8
SNHG1-215ENST00000540904 KRTAP23-1A1A580 65 aa3.81□□□□□ -1.8
SNHG1-215ENST00000540904 SEC61GP60059 68 aa3.81□□□□□ -1.8
SNHG1-215ENST00000540904 KRTAP13-4Q3LI77 160 aa3.81□□□□□ -1.8
SNHG1-215ENST00000540904 KRTAP5-9P26371 169 aa3.75□□□□□ -1.81
SNHG1-215ENST00000540904 PRR15LQ9BU68 103 aa3.75□□□□□ -1.81
SNHG1-215ENST00000540904 LINC01558Q9Y6Z2 57 aa3.75□□□□□ -1.81
SNHG1-215ENST00000540904 A0A1B0GU33 70 aa3.74□□□□□ -1.81
SNHG1-215ENST00000540904 PSPHP1O15172 72 aa3.74□□□□□ -1.81
SNHG1-215ENST00000540904 KRTAP12-2P59991 146 aa3.74□□□□□ -1.81
SNHG1-215ENST00000540904 A0A0D9SG42 100 aa3.73□□□□□ -1.81
SNHG1-215ENST00000540904 SPATA8Q6RVD6 105 aa3.72□□□□□ -1.81
SNHG1-215ENST00000540904 A0A1B0GU69 56 aa3.71□□□□□ -1.82
SNHG1-215ENST00000540904 CAMK2N1Q7Z7J9 78 aa3.71□□□□□ -1.82
SNHG1-215ENST00000540904 KRTAP8-1Q8IUC2 63 aa3.71□□□□□ -1.82
SNHG1-215ENST00000540904 KRTAP10-7P60409 375 aaPredicted RBP3.7□□□□□ -1.82
SNHG1-215ENST00000540904 BRK1Q8WUW1 75 aa3.7□□□□□ -1.82
SNHG1-215ENST00000540904 SPRR2FQ96RM1 72 aa3.69□□□□□ -1.82
SNHG1-215ENST00000540904 PRO0628Q9UI54 55 aa3.68□□□□□ -1.82
SNHG1-215ENST00000540904 KMT2DO14686 5537 aa3.68□□□□□ -1.82
SNHG1-215ENST00000540904 A6NED7 52 aa3.67□□□□□ -1.82
SNHG1-215ENST00000540904 KRTAP10-12P60413 245 aa3.67□□□□□ -1.82
SNHG1-215ENST00000540904 SPINT4Q6UDR6 99 aa3.66□□□□□ -1.82
SNHG1-215ENST00000540904 MUC12Q9UKN1 5478 aa3.65□□□□□ -1.83
SNHG1-215ENST00000540904 KRTAP12-1P59990 96 aa3.63□□□□□ -1.83
SNHG1-215ENST00000540904 SPRR2EP22531 72 aa3.62□□□□□ -1.83
SNHG1-215ENST00000540904 SPRR2BP35325 72 aa3.62□□□□□ -1.83
Retrieved 100 of 20,778 RNA–protein pairs in 135.6 ms