RNA–Protein interactions for RNA: ENST00000540784.5

DDB1-218, Transcript of damage specific DNA binding protein 1, humanhuman

TSL 3

Gene DDB1, Length 1,119 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDB1-218ENST00000540784 A8MUN3 132 aa7.39□□□□□ -1.23
DDB1-218ENST00000540784 LCA10Q71F78 164 aa7.39□□□□□ -1.23
DDB1-218ENST00000540784 CSAG1Q6PB30 78 aa7.38□□□□□ -1.23
DDB1-218ENST00000540784 SERP2Q8N6R1 65 aa7.38□□□□□ -1.23
DDB1-218ENST00000540784 KRTAP10-10P60014 251 aa7.37□□□□□ -1.23
DDB1-218ENST00000540784 MT1FP04733 61 aa7.34□□□□□ -1.23
DDB1-218ENST00000540784 SNURFQ9Y675 71 aa7.32□□□□□ -1.24
DDB1-218ENST00000540784 C20orf197Q8N268 126 aa7.3□□□□□ -1.24
DDB1-218ENST00000540784 NDUFC1O43677 76 aa7.29□□□□□ -1.24
DDB1-218ENST00000540784 DMAC1Q96GE9 116 aa7.27□□□□□ -1.25
DDB1-218ENST00000540784 COX7CP15954 63 aa7.24□□□□□ -1.25
DDB1-218ENST00000540784 KRTAP9-3Q9BYQ3 159 aa7.24□□□□□ -1.25
DDB1-218ENST00000540784 ACYP2P14621 99 aa7.22□□□□□ -1.25
DDB1-218ENST00000540784 V9GYY9 64 aa7.2□□□□□ -1.26
DDB1-218ENST00000540784 SPANXA2-OT1Q8N9U9 137 aa7.17□□□□□ -1.26
DDB1-218ENST00000540784 ANAPC13Q9BS18 74 aa7.17□□□□□ -1.26
DDB1-218ENST00000540784 FSIP2Q5CZC0 6907 aa7.14□□□□□ -1.27
DDB1-218ENST00000540784 LCE2BO14633 110 aa7.12□□□□□ -1.27
DDB1-218ENST00000540784 H0YAA0 97 aa7.1□□□□□ -1.27
DDB1-218ENST00000540784 CRCT1Q9UGL9 99 aa7.1□□□□□ -1.27
DDB1-218ENST00000540784 CHKB-CPT1BH3BT56 60 aa7.08□□□□□ -1.28
DDB1-218ENST00000540784 KRTAP9-6A0A140TA67 174 aa7.07□□□□□ -1.28
DDB1-218ENST00000540784 SPTSSBQ8NFR3 76 aa7.07□□□□□ -1.28
DDB1-218ENST00000540784 ADM2Q7Z4H4 148 aa7.06□□□□□ -1.28
DDB1-218ENST00000540784 USH2AO75445 5202 aa7.05□□□□□ -1.28
DDB1-218ENST00000540784 H7BZZ5 65 aa7.04□□□□□ -1.28
DDB1-218ENST00000540784 CYSTM1Q9H1C7 97 aa7.04□□□□□ -1.28
DDB1-218ENST00000540784 CRIPTQ9P021 101 aa7.03□□□□□ -1.28
DDB1-218ENST00000540784 CCDC179H3BU77 68 aa7□□□□□ -1.29
DDB1-218ENST00000540784 KRTAP19-1Q8IUB9 90 aa7□□□□□ -1.29
DDB1-218ENST00000540784 SPRR2GQ9BYE4 73 aa6.98□□□□□ -1.29
DDB1-218ENST00000540784 COA5Q86WW8 74 aa6.95□□□□□ -1.3
DDB1-218ENST00000540784 P0C880 135 aa6.92□□□□□ -1.3
DDB1-218ENST00000540784 SSPOA2VEC9 5147 aa6.9□□□□□ -1.31
DDB1-218ENST00000540784 KRTAP19-8Q3LI54 63 aa6.88□□□□□ -1.31
DDB1-218ENST00000540784 Q5VV11 94 aa6.88□□□□□ -1.31
DDB1-218ENST00000540784 KRTAP23-1A1A580 65 aa6.85□□□□□ -1.31
DDB1-218ENST00000540784 R4GN34 69 aa6.85□□□□□ -1.31
DDB1-218ENST00000540784 MT1BP07438 61 aa6.82□□□□□ -1.32
DDB1-218ENST00000540784 KRTAP19-6Q3LI70 58 aa6.82□□□□□ -1.32
DDB1-218ENST00000540784 M0QZ58 72 aa6.81□□□□□ -1.32
DDB1-218ENST00000540784 ATP5EP56381 51 aaPredicted RBP6.81□□□□□ -1.32
DDB1-218ENST00000540784 TMEM258P61165 79 aa6.75□□□□□ -1.33
DDB1-218ENST00000540784 SERP1Q9Y6X1 66 aa6.74□□□□□ -1.33
DDB1-218ENST00000540784 FCGBPQ9Y6R7 5405 aaPredicted RBP6.72□□□□□ -1.33
DDB1-218ENST00000540784 LINC01554Q52M75 96 aa6.71□□□□□ -1.34
DDB1-218ENST00000540784 PLAC4Q8WY50 150 aa6.69□□□□□ -1.34
DDB1-218ENST00000540784 PRO0628Q9UI54 55 aa6.67□□□□□ -1.34
DDB1-218ENST00000540784 A6NN06 94 aa6.66□□□□□ -1.34
DDB1-218ENST00000540784 A0A1B0GU69 56 aa6.62□□□□□ -1.35
DDB1-218ENST00000540784 KRTAP10-5P60370 271 aa6.61□□□□□ -1.35
DDB1-218ENST00000540784 A0A1B0GU33 70 aa6.59□□□□□ -1.35
DDB1-218ENST00000540784 KRTAP13-4Q3LI77 160 aa6.58□□□□□ -1.36
DDB1-218ENST00000540784 KRTAP9-1A8MXZ3 250 aaPredicted RBP6.57□□□□□ -1.36
DDB1-218ENST00000540784 PRR15LQ9BU68 103 aa6.53□□□□□ -1.36
DDB1-218ENST00000540784 PRO2289Q9P1D8 64 aa6.53□□□□□ -1.36
DDB1-218ENST00000540784 SPATA8Q6RVD6 105 aa6.51□□□□□ -1.37
DDB1-218ENST00000540784 LINC01558Q9Y6Z2 57 aa6.51□□□□□ -1.37
DDB1-218ENST00000540784 MACF1Q9UPN3 7388 aaKnown RBP6.5□□□□□ -1.37
DDB1-218ENST00000540784 MT1XP80297 61 aa6.48□□□□□ -1.37
DDB1-218ENST00000540784 A0A0D9SG42 100 aa6.46□□□□□ -1.38
DDB1-218ENST00000540784 SMIM26A0A096LP01 95 aa6.41□□□□□ -1.38
DDB1-218ENST00000540784 KRTAP9-7A8MTY7 169 aa6.4□□□□□ -1.38
DDB1-218ENST00000540784 PMAIP1Q13794 54 aa6.4□□□□□ -1.38
DDB1-218ENST00000540784 CAMK2N1Q7Z7J9 78 aa6.37□□□□□ -1.39
DDB1-218ENST00000540784 SYNE2Q8WXH0 6885 aaKnown RBP6.37□□□□□ -1.39
DDB1-218ENST00000540784 SPINT4Q6UDR6 99 aa6.36□□□□□ -1.39
DDB1-218ENST00000540784 A8MU10 97 aa6.32□□□□□ -1.4
DDB1-218ENST00000540784 Q1T7F1 81 aa6.32□□□□□ -1.4
DDB1-218ENST00000540784 UQCR11O14957 56 aa6.31□□□□□ -1.4
DDB1-218ENST00000540784 KRTAP12-1P59990 96 aa6.31□□□□□ -1.4
DDB1-218ENST00000540784 RPS28P62857 69 aaKnown RBP6.31□□□□□ -1.4
DDB1-218ENST00000540784 PSPHP1O15172 72 aa6.3□□□□□ -1.4
DDB1-218ENST00000540784 KRTAP12-2P59991 146 aa6.27□□□□□ -1.41
DDB1-218ENST00000540784 KRTAP6-3Q3LI67 103 aa6.27□□□□□ -1.41
DDB1-218ENST00000540784 PRAC1Q96KF2 57 aa6.24□□□□□ -1.41
DDB1-218ENST00000540784 KRTAP10-7P60409 375 aaPredicted RBP6.2□□□□□ -1.42
DDB1-218ENST00000540784 MIR22HGQ0VDD5 57 aa6.2□□□□□ -1.42
DDB1-218ENST00000540784 KRTAP10-12P60413 245 aa6.16□□□□□ -1.42
DDB1-218ENST00000540784 KMT2DO14686 5537 aa6.12□□□□□ -1.43
DDB1-218ENST00000540784 KRTAP4-8A0A0G2JLE6 195 aa6.11□□□□□ -1.43
DDB1-218ENST00000540784 KRTAP8-1Q8IUC2 63 aa6.11□□□□□ -1.43
DDB1-218ENST00000540784 KRTAP4-8Q9BYQ9 185 aa6.11□□□□□ -1.43
DDB1-218ENST00000540784 KRTAP5-9P26371 169 aa6.09□□□□□ -1.43
DDB1-218ENST00000540784 A6NED7 52 aa6.07□□□□□ -1.44
DDB1-218ENST00000540784 K7ERS5 55 aa6.04□□□□□ -1.44
DDB1-218ENST00000540784 SPRR2FQ96RM1 72 aa6.02□□□□□ -1.45
DDB1-218ENST00000540784 C10orf95Q9H7T3 257 aa6.01□□□□□ -1.45
DDB1-218ENST00000540784 MUC12Q9UKN1 5478 aa5.97□□□□□ -1.45
DDB1-218ENST00000540784 TNP1P09430 55 aa5.96□□□□□ -1.46
DDB1-218ENST00000540784 NEBP20929 6669 aa5.95□□□□□ -1.46
DDB1-218ENST00000540784 KTN1-AS1Q86SY8 53 aa5.94□□□□□ -1.46
DDB1-218ENST00000540784 MDN1Q9NU22 5596 aa5.87□□□□□ -1.47
DDB1-218ENST00000540784 SPRR2EP22531 72 aa5.86□□□□□ -1.47
DDB1-218ENST00000540784 SPRR2BP35325 72 aa5.86□□□□□ -1.47
DDB1-218ENST00000540784 SPRR2AP35326 72 aa5.86□□□□□ -1.47
DDB1-218ENST00000540784 CDC42SE1Q9NRR8 79 aa5.85□□□□□ -1.47
DDB1-218ENST00000540784 LCE1AQ5T7P2 110 aa5.81□□□□□ -1.48
DDB1-218ENST00000540784 KRTAP25-1Q3LHN0 102 aa5.78□□□□□ -1.48
DDB1-218ENST00000540784 KRTAP19-7Q3SYF9 63 aa5.78□□□□□ -1.48
Retrieved 100 of 20,778 RNA–protein pairs in 65.6 ms