RNA–Protein interactions for RNA: ENST00000540725.5

SNHG1-213, Transcript of small nucleolar RNA host gene 1, humanhuman

TSL 1 (best) BASIC

Gene SNHG1, Length 1,374 nt, Biotype lincRNA, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG1-213ENST00000540725 TMEM258P61165 79 aa6.54□□□□□ -1.36
SNHG1-213ENST00000540725 KLKP1Q107X0 134 aa6.51□□□□□ -1.37
SNHG1-213ENST00000540725 RPS28P62857 69 aaKnown RBP6.49□□□□□ -1.37
SNHG1-213ENST00000540725 C4orf26Q17RF5 130 aa6.49□□□□□ -1.37
SNHG1-213ENST00000540725 HCG22E2RYF7 251 aa6.47□□□□□ -1.37
SNHG1-213ENST00000540725 NDUFC1O43677 76 aa6.47□□□□□ -1.37
SNHG1-213ENST00000540725 CASC2Q6XLA1 102 aa6.47□□□□□ -1.37
SNHG1-213ENST00000540725 Q8N9L7 120 aa6.47□□□□□ -1.37
SNHG1-213ENST00000540725 OCR1Q9BZK8 76 aa6.47□□□□□ -1.37
SNHG1-213ENST00000540725 C20orf197Q8N268 126 aa6.45□□□□□ -1.38
SNHG1-213ENST00000540725 CYSTM1Q9H1C7 97 aa6.45□□□□□ -1.38
SNHG1-213ENST00000540725 C5orf47Q569G3 176 aa6.44□□□□□ -1.38
SNHG1-213ENST00000540725 H7BZZ5 65 aa6.42□□□□□ -1.38
SNHG1-213ENST00000540725 A6NN06 94 aa6.4□□□□□ -1.39
SNHG1-213ENST00000540725 ATP5EP56381 51 aaPredicted RBP6.4□□□□□ -1.39
SNHG1-213ENST00000540725 MT1BP07438 61 aa6.39□□□□□ -1.39
SNHG1-213ENST00000540725 NEBP20929 6669 aa6.39□□□□□ -1.39
SNHG1-213ENST00000540725 KRTAP3-1Q9BYR8 98 aa6.38□□□□□ -1.39
SNHG1-213ENST00000540725 S4R3F8 94 aa6.38□□□□□ -1.39
SNHG1-213ENST00000540725 Q5VV11 94 aa6.37□□□□□ -1.39
SNHG1-213ENST00000540725 MUC12Q9UKN1 5478 aa6.37□□□□□ -1.39
SNHG1-213ENST00000540725 CSAG1Q6PB30 78 aa6.36□□□□□ -1.39
SNHG1-213ENST00000540725 KRTAP19-8Q3LI54 63 aa6.35□□□□□ -1.39
SNHG1-213ENST00000540725 SPRR2GQ9BYE4 73 aa6.35□□□□□ -1.39
SNHG1-213ENST00000540725 C1orf64Q8NEQ6 169 aa6.34□□□□□ -1.39
SNHG1-213ENST00000540725 SNURFQ9Y675 71 aa6.34□□□□□ -1.39
SNHG1-213ENST00000540725 LCA10Q71F78 164 aa6.33□□□□□ -1.4
SNHG1-213ENST00000540725 SERP1Q9Y6X1 66 aa6.32□□□□□ -1.4
SNHG1-213ENST00000540725 H3BPC8 53 aa6.31□□□□□ -1.4
SNHG1-213ENST00000540725 KRTAP10-5P60370 271 aa6.29□□□□□ -1.4
SNHG1-213ENST00000540725 MP68P56378 58 aa6.26□□□□□ -1.41
SNHG1-213ENST00000540725 TP53AIP1Q9HCN2 124 aa6.25□□□□□ -1.41
SNHG1-213ENST00000540725 SMIM26A0A096LP01 95 aa6.2□□□□□ -1.42
SNHG1-213ENST00000540725 CYP4F30PQ9H0H9 118 aa6.2□□□□□ -1.42
SNHG1-213ENST00000540725 KMT2DO14686 5537 aa6.2□□□□□ -1.42
SNHG1-213ENST00000540725 TRAV22A0A0B4J277 110 aa6.19□□□□□ -1.42
SNHG1-213ENST00000540725 KRTAP5-9P26371 169 aa6.19□□□□□ -1.42
SNHG1-213ENST00000540725 KRTAP20-1Q3LI63 56 aa6.19□□□□□ -1.42
SNHG1-213ENST00000540725 SPANXA2-OT1Q8N9U9 137 aa6.19□□□□□ -1.42
SNHG1-213ENST00000540725 H0Y9P7 68 aa6.18□□□□□ -1.42
SNHG1-213ENST00000540725 MDN1Q9NU22 5596 aa6.18□□□□□ -1.42
SNHG1-213ENST00000540725 LINC00208Q96KT6 92 aa6.17□□□□□ -1.42
SNHG1-213ENST00000540725 CRIPTQ9P021 101 aa6.16□□□□□ -1.42
SNHG1-213ENST00000540725 LOC101927531A0A1B0GV80 90 aa6.09□□□□□ -1.43
SNHG1-213ENST00000540725 SVIPQ8NHG7 77 aa6.09□□□□□ -1.43
SNHG1-213ENST00000540725 KRTAP4-8Q9BYQ9 185 aa6.08□□□□□ -1.44
SNHG1-213ENST00000540725 H0YAA0 97 aa6.04□□□□□ -1.44
SNHG1-213ENST00000540725 Q1T7F1 81 aa6.04□□□□□ -1.44
SNHG1-213ENST00000540725 V9GYY9 64 aa6.01□□□□□ -1.45
SNHG1-213ENST00000540725 A8MUN3 132 aa5.97□□□□□ -1.45
SNHG1-213ENST00000540725 KRTAP2-3P0C7H8 128 aa5.97□□□□□ -1.45
SNHG1-213ENST00000540725 ADM2Q7Z4H4 148 aa5.97□□□□□ -1.45
SNHG1-213ENST00000540725 SPRR2FQ96RM1 72 aa5.97□□□□□ -1.45
SNHG1-213ENST00000540725 KRTAP2-4Q9BYR9 128 aa5.97□□□□□ -1.45
SNHG1-213ENST00000540725 PRO2289Q9P1D8 64 aa5.96□□□□□ -1.45
SNHG1-213ENST00000540725 MT1XP80297 61 aa5.94□□□□□ -1.46
SNHG1-213ENST00000540725 COA5Q86WW8 74 aa5.93□□□□□ -1.46
SNHG1-213ENST00000540725 SPRR2EP22531 72 aa5.93□□□□□ -1.46
SNHG1-213ENST00000540725 SPRR2BP35325 72 aa5.93□□□□□ -1.46
SNHG1-213ENST00000540725 SPRR2AP35326 72 aa5.93□□□□□ -1.46
SNHG1-213ENST00000540725 PLAC4Q8WY50 150 aa5.9□□□□□ -1.47
SNHG1-213ENST00000540725 ACYP2P14621 99 aa5.88□□□□□ -1.47
SNHG1-213ENST00000540725 KRTAP8-1Q8IUC2 63 aa5.88□□□□□ -1.47
SNHG1-213ENST00000540725 DMAC1Q96GE9 116 aa5.87□□□□□ -1.47
SNHG1-213ENST00000540725 PRO0628Q9UI54 55 aa5.87□□□□□ -1.47
SNHG1-213ENST00000540725 R4GN34 69 aa5.84□□□□□ -1.47
SNHG1-213ENST00000540725 KRTAP12-2P59991 146 aa5.83□□□□□ -1.48
SNHG1-213ENST00000540725 LINC01558Q9Y6Z2 57 aa5.83□□□□□ -1.48
SNHG1-213ENST00000540725 LCE1AQ5T7P2 110 aa5.82□□□□□ -1.48
SNHG1-213ENST00000540725 P0C880 135 aa5.81□□□□□ -1.48
SNHG1-213ENST00000540725 LCE3BQ5TA77 95 aa5.81□□□□□ -1.48
SNHG1-213ENST00000540725 M0QZ58 72 aa5.79□□□□□ -1.48
SNHG1-213ENST00000540725 PSPHP1O15172 72 aa5.79□□□□□ -1.48
SNHG1-213ENST00000540725 BRK1Q8WUW1 75 aa5.78□□□□□ -1.48
SNHG1-213ENST00000540725 KRTAP2-2Q9BYT5 123 aa5.77□□□□□ -1.49
SNHG1-213ENST00000540725 KRTAP2-1Q9BYU5 128 aa5.77□□□□□ -1.49
SNHG1-213ENST00000540725 PRR15LQ9BU68 103 aa5.76□□□□□ -1.49
SNHG1-213ENST00000540725 KRTAP4-8A0A0G2JLE6 195 aa5.75□□□□□ -1.49
SNHG1-213ENST00000540725 SPRR2DP22532 72 aa5.73□□□□□ -1.49
SNHG1-213ENST00000540725 KRTAP4-12Q9BQ66 201 aa5.73□□□□□ -1.49
SNHG1-213ENST00000540725 CHKB-CPT1BH3BT56 60 aa5.72□□□□□ -1.49
SNHG1-213ENST00000540725 LINC01554Q52M75 96 aa5.72□□□□□ -1.49
SNHG1-213ENST00000540725 KRTAP10-7P60409 375 aaPredicted RBP5.67□□□□□ -1.5
SNHG1-213ENST00000540725 KRTAP9-9Q9BYP9 154 aa5.66□□□□□ -1.5
SNHG1-213ENST00000540725 KRTAP9-4Q9BYQ2 154 aa5.66□□□□□ -1.5
SNHG1-213ENST00000540725 A6NED7 52 aa5.65□□□□□ -1.51
SNHG1-213ENST00000540725 CDC42SE1Q9NRR8 79 aa5.65□□□□□ -1.51
SNHG1-213ENST00000540725 KRTAP10-12P60413 245 aa5.64□□□□□ -1.51
SNHG1-213ENST00000540725 SPTSSBQ8NFR3 76 aa5.63□□□□□ -1.51
SNHG1-213ENST00000540725 A0A1B0GU69 56 aa5.61□□□□□ -1.51
SNHG1-213ENST00000540725 SPATA8Q6RVD6 105 aa5.53□□□□□ -1.52
SNHG1-213ENST00000540725 A8MU10 97 aa5.52□□□□□ -1.53
SNHG1-213ENST00000540725 UQCR11O14957 56 aa5.52□□□□□ -1.53
SNHG1-213ENST00000540725 SEC61GP60059 68 aa5.52□□□□□ -1.53
SNHG1-213ENST00000540725 PMAIP1Q13794 54 aa5.5□□□□□ -1.53
SNHG1-213ENST00000540725 MIR22HGQ0VDD5 57 aa5.45□□□□□ -1.54
SNHG1-213ENST00000540725 KRTAP4-7Q9BYR0 210 aa5.44□□□□□ -1.54
SNHG1-213ENST00000540725 LCE1DQ5T752 114 aa5.41□□□□□ -1.54
SNHG1-213ENST00000540725 KTN1-AS1Q86SY8 53 aa5.39□□□□□ -1.55
SNHG1-213ENST00000540725 A0A1B0GU33 70 aa5.36□□□□□ -1.55
Retrieved 100 of 20,778 RNA–protein pairs in 7.1 ms