RNA–Protein interactions for RNA: ENST00000540651.5

ARF1-213, Transcript of ADP ribosylation factor 1, humanhuman

APPRIS P1 TSL 2 BASIC

Gene ARF1, Length 1,972 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ARF1-213ENST00000540651 XP32Q5T750 250 aa12.22□□□□□ -0.45
ARF1-213ENST00000540651 C20orf166-AS1Q96NR2 134 aa12.2□□□□□ -0.46
ARF1-213ENST00000540651 LRP2P98164 4655 aa12.19□□□□□ -0.46
ARF1-213ENST00000540651 A8MUU9 505 aa12.18□□□□□ -0.46
ARF1-213ENST00000540651 DMAC1Q96GE9 116 aa12.17□□□□□ -0.46
ARF1-213ENST00000540651 SPATA8Q6RVD6 105 aa12.09□□□□□ -0.47
ARF1-213ENST00000540651 RPL37P61927 97 aaKnown RBP12.07□□□□□ -0.48
ARF1-213ENST00000540651 IGKV2-30P06310 120 aa12.06□□□□□ -0.48
ARF1-213ENST00000540651 A0A1B0GU69 56 aa12.01□□□□□ -0.49
ARF1-213ENST00000540651 UQCR11O14957 56 aa11.92□□□□□ -0.5
ARF1-213ENST00000540651 IGKV2D-30A0A075B6S6 120 aa11.9□□□□□ -0.5
ARF1-213ENST00000540651 PRAC1Q96KF2 57 aa11.9□□□□□ -0.5
ARF1-213ENST00000540651 MIR22HGQ0VDD5 57 aa11.89□□□□□ -0.51
ARF1-213ENST00000540651 MUC17Q685J3 4493 aa11.84□□□□□ -0.51
ARF1-213ENST00000540651 LINC01554Q52M75 96 aa11.84□□□□□ -0.51
ARF1-213ENST00000540651 ADM2Q7Z4H4 148 aa11.83□□□□□ -0.52
ARF1-213ENST00000540651 SEC61BP60468 96 aaKnown RBP11.79□□□□□ -0.52
ARF1-213ENST00000540651 UBR4Q5T4S7 5183 aa11.78□□□□□ -0.52
ARF1-213ENST00000540651 KRTAP4-1Q9BYQ7 146 aa11.75□□□□□ -0.53
ARF1-213ENST00000540651 MUC2Q02817 5179 aa11.67□□□□□ -0.54
ARF1-213ENST00000540651 RNF213Q63HN8 5207 aa11.61□□□□□ -0.55
ARF1-213ENST00000540651 CSAG1Q6PB30 78 aa11.56□□□□□ -0.56
ARF1-213ENST00000540651 KRTAP3-1Q9BYR8 98 aa11.45□□□□□ -0.58
ARF1-213ENST00000540651 COX6B2Q6YFQ2 88 aa11.39□□□□□ -0.59
ARF1-213ENST00000540651 KRTAP19-2Q3LHN2 52 aa11.38□□□□□ -0.59
ARF1-213ENST00000540651 H0YAA0 97 aa11.36□□□□□ -0.59
ARF1-213ENST00000540651 KRTAP25-1Q3LHN0 102 aa11.3□□□□□ -0.6
ARF1-213ENST00000540651 A0A1B0GU33 70 aa11.27□□□□□ -0.61
ARF1-213ENST00000540651 H3BS24 57 aa11.27□□□□□ -0.61
ARF1-213ENST00000540651 H1FX-AS1Q4G0G2 97 aa11.22□□□□□ -0.61
ARF1-213ENST00000540651 FAT4Q6V0I7 4981 aa11.21□□□□□ -0.62
ARF1-213ENST00000540651 LCE2CQ5TA81 110 aa11.21□□□□□ -0.62
ARF1-213ENST00000540651 ROMO1P60602 79 aa11.1□□□□□ -0.63
ARF1-213ENST00000540651 FLGP20930 4061 aaPredicted RBP11.08□□□□□ -0.64
ARF1-213ENST00000540651 K7ERS5 55 aa11.06□□□□□ -0.64
ARF1-213ENST00000540651 KRTAP3-3Q9BYR6 98 aa11.05□□□□□ -0.64
ARF1-213ENST00000540651 S4R3F8 94 aa11.04□□□□□ -0.64
ARF1-213ENST00000540651 MT1HP80294 61 aa10.96□□□□□ -0.65
ARF1-213ENST00000540651 M0R2T5 61 aa10.74□□□□□ -0.69
ARF1-213ENST00000540651 KRTAP10-6P60371 365 aaPredicted RBP10.74□□□□□ -0.69
ARF1-213ENST00000540651 LCE2AQ5TA79 106 aaPredicted RBP10.74□□□□□ -0.69
ARF1-213ENST00000540651 P0C880 135 aa10.73□□□□□ -0.69
ARF1-213ENST00000540651 CRIPTQ9P021 101 aa10.73□□□□□ -0.69
ARF1-213ENST00000540651 KRTAP3-2Q9BYR7 98 aa10.69□□□□□ -0.7
ARF1-213ENST00000540651 KRTAP13-4Q3LI77 160 aa10.62□□□□□ -0.71
ARF1-213ENST00000540651 LORP23490 312 aaPredicted RBP10.54□□□□□ -0.72
ARF1-213ENST00000540651 KRTAP9-8Q9BYQ0 159 aa10.54□□□□□ -0.72
ARF1-213ENST00000540651 SPINT4Q6UDR6 99 aa10.5□□□□□ -0.73
ARF1-213ENST00000540651 A0A0D9SG42 100 aa10.48□□□□□ -0.73
ARF1-213ENST00000540651 MT2AP02795 61 aa10.46□□□□□ -0.73
ARF1-213ENST00000540651 KRTAP15-1Q3LI76 137 aa10.43□□□□□ -0.74
ARF1-213ENST00000540651 MT1FP04733 61 aa10.42□□□□□ -0.74
ARF1-213ENST00000540651 M0QZ58 72 aa10.35□□□□□ -0.75
ARF1-213ENST00000540651 C10orf95Q9H7T3 257 aa10.35□□□□□ -0.75
ARF1-213ENST00000540651 KRTAP12-2P59991 146 aa10.32□□□□□ -0.76
ARF1-213ENST00000540651 KRTAP10-10P60014 251 aa10.32□□□□□ -0.76
ARF1-213ENST00000540651 KRTAP12-1P59990 96 aa10.28□□□□□ -0.76
ARF1-213ENST00000540651 NDUFAF8A1L188 74 aa10.2□□□□□ -0.78
ARF1-213ENST00000540651 KRTAP9-3Q9BYQ3 159 aa10.16□□□□□ -0.78
ARF1-213ENST00000540651 R4GN34 69 aa10.15□□□□□ -0.78
ARF1-213ENST00000540651 KRTAP19-1Q8IUB9 90 aa10.14□□□□□ -0.79
ARF1-213ENST00000540651 SPRR2GQ9BYE4 73 aa10.09□□□□□ -0.79
ARF1-213ENST00000540651 LCE2BO14633 110 aa9.95□□□□□ -0.82
ARF1-213ENST00000540651 KRTAP19-8Q3LI54 63 aa9.87□□□□□ -0.83
ARF1-213ENST00000540651 USH2AO75445 5202 aa9.84□□□□□ -0.83
ARF1-213ENST00000540651 MT1BP07438 61 aa9.81□□□□□ -0.84
ARF1-213ENST00000540651 LCE2DQ5TA82 110 aaPredicted RBP9.78□□□□□ -0.84
ARF1-213ENST00000540651 PLAC4Q8WY50 150 aa9.72□□□□□ -0.85
ARF1-213ENST00000540651 PP632Q6XCG6 107 aa9.59□□□□□ -0.87
ARF1-213ENST00000540651 SSPOA2VEC9 5147 aa9.58□□□□□ -0.88
ARF1-213ENST00000540651 KRTAP9-2Q9BYQ4 174 aa9.57□□□□□ -0.88
ARF1-213ENST00000540651 FSIP2Q5CZC0 6907 aa9.57□□□□□ -0.88
ARF1-213ENST00000540651 CAMK2N1Q7Z7J9 78 aa9.56□□□□□ -0.88
ARF1-213ENST00000540651 MT1XP80297 61 aa9.43□□□□□ -0.9
ARF1-213ENST00000540651 KRTAP10-5P60370 271 aa9.4□□□□□ -0.9
ARF1-213ENST00000540651 LUZP6Q538Z0 58 aa9.39□□□□□ -0.91
ARF1-213ENST00000540651 KRTAP19-6Q3LI70 58 aa9.34□□□□□ -0.91
ARF1-213ENST00000540651 KRTAP23-1A1A580 65 aa9.26□□□□□ -0.93
ARF1-213ENST00000540651 A0A0A0MQY5 61 aa9.25□□□□□ -0.93
ARF1-213ENST00000540651 PRO2289Q9P1D8 64 aa9.21□□□□□ -0.94
ARF1-213ENST00000540651 TNP1P09430 55 aa9.19□□□□□ -0.94
ARF1-213ENST00000540651 CRCT1Q9UGL9 99 aa9.17□□□□□ -0.94
ARF1-213ENST00000540651 FCGBPQ9Y6R7 5405 aaPredicted RBP9.17□□□□□ -0.94
ARF1-213ENST00000540651 SPRR5A0A1B0GTR4 108 aa9.12□□□□□ -0.95
ARF1-213ENST00000540651 KRTAP10-7P60409 375 aaPredicted RBP9.05□□□□□ -0.96
ARF1-213ENST00000540651 KRTAP10-12P60413 245 aa8.91□□□□□ -0.98
ARF1-213ENST00000540651 KRTAP9-6A0A140TA67 174 aa8.9□□□□□ -0.99
ARF1-213ENST00000540651 KMT2DO14686 5537 aa8.89□□□□□ -0.99
ARF1-213ENST00000540651 KRTAP4-8A0A0G2JLE6 195 aa8.8□□□□□ -1
ARF1-213ENST00000540651 KRTAP4-8Q9BYQ9 185 aa8.8□□□□□ -1
ARF1-213ENST00000540651 LCE3AQ5TA76 89 aa8.72□□□□□ -1.01
ARF1-213ENST00000540651 MACF1Q9UPN3 7388 aaKnown RBP8.69□□□□□ -1.02
ARF1-213ENST00000540651 KRTAP8-1Q8IUC2 63 aa8.55□□□□□ -1.04
ARF1-213ENST00000540651 KRTAP9-1A8MXZ3 250 aaPredicted RBP8.52□□□□□ -1.05
ARF1-213ENST00000540651 SYNE2Q8WXH0 6885 aaKnown RBP8.49□□□□□ -1.05
ARF1-213ENST00000540651 KRTAP19-5Q3LI72 72 aa8.44□□□□□ -1.06
ARF1-213ENST00000540651 KRTAP19-7Q3SYF9 63 aa8.43□□□□□ -1.06
ARF1-213ENST00000540651 INE1O15225 51 aa8.41□□□□□ -1.06
ARF1-213ENST00000540651 KRTAP12-3P60328 96 aa8.34□□□□□ -1.07
ARF1-213ENST00000540651 MUC12Q9UKN1 5478 aa8.28□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 13.6 ms