RNA–Protein interactions for RNA: ENST00000540562.1

INO80E-203, Transcript of INO80 complex subunit E, humanhuman

TSL 2

Gene INO80E, Length 3,064 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
INO80E-203ENST00000540562 RPS29P62273 56 aaKnown RBP7.41□□□□□ -1.22
INO80E-203ENST00000540562 Q5VSD8 79 aa7.41□□□□□ -1.22
INO80E-203ENST00000540562 RYR3Q15413 4870 aa7.41□□□□□ -1.22
INO80E-203ENST00000540562 KRTAP10-8P60410 259 aa7.38□□□□□ -1.23
INO80E-203ENST00000540562 H1FX-AS1Q4G0G2 97 aa7.37□□□□□ -1.23
INO80E-203ENST00000540562 COX6B2Q6YFQ2 88 aa7.36□□□□□ -1.23
INO80E-203ENST00000540562 KRTAP17-1Q9BYP8 105 aa7.36□□□□□ -1.23
INO80E-203ENST00000540562 LINC01554Q52M75 96 aa7.36□□□□□ -1.23
INO80E-203ENST00000540562 TNXBP22105 4242 aa7.33□□□□□ -1.24
INO80E-203ENST00000540562 LRP2P98164 4655 aa7.32□□□□□ -1.24
INO80E-203ENST00000540562 RYR1P21817 5038 aa7.3□□□□□ -1.24
INO80E-203ENST00000540562 XP32Q5T750 250 aa7.27□□□□□ -1.25
INO80E-203ENST00000540562 KRTAP13-4Q3LI77 160 aa7.25□□□□□ -1.25
INO80E-203ENST00000540562 KRTAP3-3Q9BYR6 98 aa7.21□□□□□ -1.25
INO80E-203ENST00000540562 P0C880 135 aa7.21□□□□□ -1.26
INO80E-203ENST00000540562 ABCA13Q86UQ4 5058 aa7.21□□□□□ -1.26
INO80E-203ENST00000540562 RPL37P61927 97 aaKnown RBP7.21□□□□□ -1.26
INO80E-203ENST00000540562 KRTAP21-3Q3LHN1 58 aa7.21□□□□□ -1.26
INO80E-203ENST00000540562 EPPK1P58107 5090 aaKnown RBP7.2□□□□□ -1.26
INO80E-203ENST00000540562 S4R3F8 94 aa7.19□□□□□ -1.26
INO80E-203ENST00000540562 K7ERS5 55 aa7.18□□□□□ -1.26
INO80E-203ENST00000540562 KRTAP10-6P60371 365 aaPredicted RBP7.17□□□□□ -1.26
INO80E-203ENST00000540562 KRTAP25-1Q3LHN0 102 aa7.12□□□□□ -1.27
INO80E-203ENST00000540562 SPINT4Q6UDR6 99 aa7.12□□□□□ -1.27
INO80E-203ENST00000540562 C10orf95Q9H7T3 257 aa7.11□□□□□ -1.27
INO80E-203ENST00000540562 KRTAP3-2Q9BYR7 98 aa7.09□□□□□ -1.27
INO80E-203ENST00000540562 MT1HL1P0DM35 61 aa7.08□□□□□ -1.28
INO80E-203ENST00000540562 KRTAP4-5Q9BYR2 181 aa7.05□□□□□ -1.28
INO80E-203ENST00000540562 MUC2Q02817 5179 aa7.02□□□□□ -1.28
INO80E-203ENST00000540562 KRTAP12-2P59991 146 aa7.01□□□□□ -1.29
INO80E-203ENST00000540562 ROMO1P60602 79 aa7.01□□□□□ -1.29
INO80E-203ENST00000540562 J3QL48 77 aa6.97□□□□□ -1.29
INO80E-203ENST00000540562 TPRXLQ17RH7 258 aa6.95□□□□□ -1.3
INO80E-203ENST00000540562 M0QZ58 72 aa6.85□□□□□ -1.31
INO80E-203ENST00000540562 KRTAP12-1P59990 96 aa6.85□□□□□ -1.31
INO80E-203ENST00000540562 A0A0A0MQY5 61 aa6.84□□□□□ -1.31
INO80E-203ENST00000540562 LORP23490 312 aaPredicted RBP6.79□□□□□ -1.32
INO80E-203ENST00000540562 R4GN34 69 aa6.78□□□□□ -1.32
INO80E-203ENST00000540562 HERC2O95714 4834 aa6.78□□□□□ -1.32
INO80E-203ENST00000540562 KRTAP4-1Q9BYQ7 146 aa6.75□□□□□ -1.33
INO80E-203ENST00000540562 FAT4Q6V0I7 4981 aa6.65□□□□□ -1.34
INO80E-203ENST00000540562 HERC1Q15751 4861 aa6.65□□□□□ -1.35
INO80E-203ENST00000540562 MUC17Q685J3 4493 aa6.63□□□□□ -1.35
INO80E-203ENST00000540562 SEC61BP60468 96 aaKnown RBP6.62□□□□□ -1.35
INO80E-203ENST00000540562 NDUFAF8A1L188 74 aa6.62□□□□□ -1.35
INO80E-203ENST00000540562 RNF213Q63HN8 5207 aa6.55□□□□□ -1.36
INO80E-203ENST00000540562 PCLOQ9Y6V0 5065 aa6.52□□□□□ -1.37
INO80E-203ENST00000540562 CAMK2N1Q7Z7J9 78 aa6.51□□□□□ -1.37
INO80E-203ENST00000540562 KRTAP15-1Q3LI76 137 aa6.45□□□□□ -1.38
INO80E-203ENST00000540562 KRTAP19-2Q3LHN2 52 aa6.36□□□□□ -1.39
INO80E-203ENST00000540562 UBR4Q5T4S7 5183 aa6.35□□□□□ -1.39
INO80E-203ENST00000540562 M0R2T5 61 aa6.29□□□□□ -1.4
INO80E-203ENST00000540562 FLGP20930 4061 aaPredicted RBP6.28□□□□□ -1.4
INO80E-203ENST00000540562 PLAC4Q8WY50 150 aa6.28□□□□□ -1.4
INO80E-203ENST00000540562 BIRC6Q9NR09 4857 aa6.28□□□□□ -1.4
INO80E-203ENST00000540562 HMCN2Q8NDA2 5059 aa6.27□□□□□ -1.41
INO80E-203ENST00000540562 LUZP6Q538Z0 58 aa6.22□□□□□ -1.41
INO80E-203ENST00000540562 TNP1P09430 55 aa6.08□□□□□ -1.44
INO80E-203ENST00000540562 LCE2CQ5TA81 110 aa6.05□□□□□ -1.44
INO80E-203ENST00000540562 KRTAP10-10P60014 251 aa6.03□□□□□ -1.44
INO80E-203ENST00000540562 PP632Q6XCG6 107 aa5.97□□□□□ -1.45
INO80E-203ENST00000540562 KRTAP19-1Q8IUB9 90 aa5.97□□□□□ -1.45
INO80E-203ENST00000540562 MT1HP80294 61 aa5.95□□□□□ -1.46
INO80E-203ENST00000540562 MT1FP04733 61 aa5.93□□□□□ -1.46
INO80E-203ENST00000540562 USH2AO75445 5202 aa5.92□□□□□ -1.46
INO80E-203ENST00000540562 MT2AP02795 61 aa5.87□□□□□ -1.47
INO80E-203ENST00000540562 LCE3AQ5TA76 89 aa5.87□□□□□ -1.47
INO80E-203ENST00000540562 SPRR2GQ9BYE4 73 aa5.84□□□□□ -1.47
INO80E-203ENST00000540562 KMT2DO14686 5537 aa5.8□□□□□ -1.48
INO80E-203ENST00000540562 KRTAP9-8Q9BYQ0 159 aa5.77□□□□□ -1.49
INO80E-203ENST00000540562 FSIP2Q5CZC0 6907 aa5.66□□□□□ -1.5
INO80E-203ENST00000540562 MT1BP07438 61 aa5.64□□□□□ -1.51
INO80E-203ENST00000540562 KRTAP10-5P60370 271 aa5.63□□□□□ -1.51
INO80E-203ENST00000540562 MT1XP80297 61 aa5.62□□□□□ -1.51
INO80E-203ENST00000540562 KRTAP10-7P60409 375 aaPredicted RBP5.61□□□□□ -1.51
INO80E-203ENST00000540562 KRTAP10-12P60413 245 aa5.56□□□□□ -1.52
INO80E-203ENST00000540562 KRTAP23-1A1A580 65 aa5.55□□□□□ -1.52
INO80E-203ENST00000540562 SPRR5A0A1B0GTR4 108 aa5.54□□□□□ -1.52
INO80E-203ENST00000540562 KRTAP12-3P60328 96 aa5.52□□□□□ -1.53
INO80E-203ENST00000540562 KRTAP19-8Q3LI54 63 aa5.52□□□□□ -1.53
INO80E-203ENST00000540562 KRTAP9-3Q9BYQ3 159 aa5.49□□□□□ -1.53
INO80E-203ENST00000540562 KRTAP8-1Q8IUC2 63 aa5.46□□□□□ -1.54
INO80E-203ENST00000540562 LCE2DQ5TA82 110 aaPredicted RBP5.46□□□□□ -1.54
INO80E-203ENST00000540562 LCE2BO14633 110 aa5.41□□□□□ -1.54
INO80E-203ENST00000540562 KRTAP4-8A0A0G2JLE6 195 aa5.4□□□□□ -1.54
INO80E-203ENST00000540562 KRTAP4-8Q9BYQ9 185 aa5.4□□□□□ -1.54
INO80E-203ENST00000540562 KRTAP19-5Q3LI72 72 aa5.35□□□□□ -1.55
INO80E-203ENST00000540562 PRO2289Q9P1D8 64 aa5.33□□□□□ -1.56
INO80E-203ENST00000540562 KRTAP4-7Q9BYR0 210 aa5.24□□□□□ -1.57
INO80E-203ENST00000540562 LCE2AQ5TA79 106 aaPredicted RBP5.17□□□□□ -1.58
INO80E-203ENST00000540562 DSTQ03001 7570 aaKnown RBP5.15□□□□□ -1.59
INO80E-203ENST00000540562 LCE3CQ5T5A8 94 aa5.13□□□□□ -1.59
INO80E-203ENST00000540562 SSPOA2VEC9 5147 aa5.13□□□□□ -1.59
INO80E-203ENST00000540562 KRTAP9-6A8MVA2 160 aa5.09□□□□□ -1.59
INO80E-203ENST00000540562 MUC12Q9UKN1 5478 aa5.08□□□□□ -1.6
INO80E-203ENST00000540562 FCGBPQ9Y6R7 5405 aaPredicted RBP5.02□□□□□ -1.61
INO80E-203ENST00000540562 KRTAP19-7Q3SYF9 63 aa5□□□□□ -1.61
INO80E-203ENST00000540562 INE1O15225 51 aa4.98□□□□□ -1.61
INO80E-203ENST00000540562 CRCT1Q9UGL9 99 aa4.95□□□□□ -1.62
INO80E-203ENST00000540562 KRTAP4-3Q9BYR4 195 aa4.91□□□□□ -1.62
Retrieved 100 of 20,778 RNA–protein pairs in 138.7 ms