RNA–Protein interactions for RNA: ENST00000539739.5

DDB1-216, Transcript of damage specific DNA binding protein 1, humanhuman

TSL 5

Gene DDB1, Length 1,624 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDB1-216ENST00000539739 KRTAP16-1A8MUX0 517 aa8.32□□□□□ -1.08
DDB1-216ENST00000539739 SEC61BP60468 96 aaKnown RBP8.32□□□□□ -1.08
DDB1-216ENST00000539739 RPL37P61927 97 aaKnown RBP8.32□□□□□ -1.08
DDB1-216ENST00000539739 C20orf166-AS1Q96NR2 134 aa8.32□□□□□ -1.08
DDB1-216ENST00000539739 SPATA8Q6RVD6 105 aa8.32□□□□□ -1.08
DDB1-216ENST00000539739 TP53AIP1Q9HCN2 124 aa8.32□□□□□ -1.08
DDB1-216ENST00000539739 MMP24-AS1A0A0U1RRL7 71 aa8.31□□□□□ -1.08
DDB1-216ENST00000539739 A8MUU9 505 aa8.3□□□□□ -1.08
DDB1-216ENST00000539739 WFDC13Q8IUB5 93 aa8.29□□□□□ -1.08
DDB1-216ENST00000539739 MRPL34Q9BQ48 92 aaKnown RBP8.26□□□□□ -1.09
DDB1-216ENST00000539739 PCOTHQ58A44 107 aa8.25□□□□□ -1.09
DDB1-216ENST00000539739 ADM2Q7Z4H4 148 aa8.24□□□□□ -1.09
DDB1-216ENST00000539739 UBR4Q5T4S7 5183 aa8.23□□□□□ -1.09
DDB1-216ENST00000539739 HRES1P13985 223 aa8.21□□□□□ -1.09
DDB1-216ENST00000539739 MUC17Q685J3 4493 aa8.21□□□□□ -1.1
DDB1-216ENST00000539739 CSAG1Q6PB30 78 aa8.19□□□□□ -1.1
DDB1-216ENST00000539739 ROMO1P60602 79 aa8.16□□□□□ -1.1
DDB1-216ENST00000539739 UQCR11O14957 56 aa8.14□□□□□ -1.11
DDB1-216ENST00000539739 MIR22HGQ0VDD5 57 aa8.12□□□□□ -1.11
DDB1-216ENST00000539739 ACYP2P14621 99 aa8.11□□□□□ -1.11
DDB1-216ENST00000539739 KRTAP4-1Q9BYQ7 146 aa8.09□□□□□ -1.11
DDB1-216ENST00000539739 A0A1B0GU69 56 aa8.08□□□□□ -1.12
DDB1-216ENST00000539739 RNF213Q63HN8 5207 aa8.07□□□□□ -1.12
DDB1-216ENST00000539739 MUC2Q02817 5179 aa8.04□□□□□ -1.12
DDB1-216ENST00000539739 A0A0A0MQY5 61 aa8.03□□□□□ -1.12
DDB1-216ENST00000539739 KRTAP25-1Q3LHN0 102 aa8.03□□□□□ -1.12
DDB1-216ENST00000539739 Q5W150 140 aa8.03□□□□□ -1.12
DDB1-216ENST00000539739 IGKV2D-30A0A075B6S6 120 aa7.95□□□□□ -1.14
DDB1-216ENST00000539739 IGKV2-30P06310 120 aa7.95□□□□□ -1.14
DDB1-216ENST00000539739 DMAC1Q96GE9 116 aa7.95□□□□□ -1.14
DDB1-216ENST00000539739 COX6B2Q6YFQ2 88 aa7.87□□□□□ -1.15
DDB1-216ENST00000539739 KRTAP19-2Q3LHN2 52 aa7.82□□□□□ -1.16
DDB1-216ENST00000539739 P0C880 135 aa7.78□□□□□ -1.16
DDB1-216ENST00000539739 LCE2CQ5TA81 110 aa7.78□□□□□ -1.16
DDB1-216ENST00000539739 FAT4Q6V0I7 4981 aa7.77□□□□□ -1.16
DDB1-216ENST00000539739 MT1HP80294 61 aa7.67□□□□□ -1.18
DDB1-216ENST00000539739 FLGP20930 4061 aaPredicted RBP7.67□□□□□ -1.18
DDB1-216ENST00000539739 H1FX-AS1Q4G0G2 97 aa7.67□□□□□ -1.18
DDB1-216ENST00000539739 LCE2AQ5TA79 106 aaPredicted RBP7.66□□□□□ -1.18
DDB1-216ENST00000539739 M0R2T5 61 aa7.64□□□□□ -1.19
DDB1-216ENST00000539739 K7ERS5 55 aa7.62□□□□□ -1.19
DDB1-216ENST00000539739 KRTAP3-1Q9BYR8 98 aa7.6□□□□□ -1.19
DDB1-216ENST00000539739 SPINT4Q6UDR6 99 aa7.52□□□□□ -1.21
DDB1-216ENST00000539739 S4R3F8 94 aa7.52□□□□□ -1.21
DDB1-216ENST00000539739 NDUFAF8A1L188 74 aa7.49□□□□□ -1.21
DDB1-216ENST00000539739 KRTAP15-1Q3LI76 137 aa7.49□□□□□ -1.21
DDB1-216ENST00000539739 H0YAA0 97 aa7.49□□□□□ -1.21
DDB1-216ENST00000539739 KRTAP10-6P60371 365 aaPredicted RBP7.47□□□□□ -1.21
DDB1-216ENST00000539739 LORP23490 312 aaPredicted RBP7.43□□□□□ -1.22
DDB1-216ENST00000539739 LUZP6Q538Z0 58 aa7.41□□□□□ -1.22
DDB1-216ENST00000539739 A0A1B0GU33 70 aa7.41□□□□□ -1.22
DDB1-216ENST00000539739 KRTAP9-8Q9BYQ0 159 aa7.33□□□□□ -1.24
DDB1-216ENST00000539739 MT2AP02795 61 aa7.27□□□□□ -1.25
DDB1-216ENST00000539739 KRTAP10-10P60014 251 aa7.24□□□□□ -1.25
DDB1-216ENST00000539739 MT1FP04733 61 aa7.21□□□□□ -1.26
DDB1-216ENST00000539739 LCE2BO14633 110 aa7.17□□□□□ -1.26
DDB1-216ENST00000539739 CRIPTQ9P021 101 aa7.16□□□□□ -1.26
DDB1-216ENST00000539739 KRTAP9-3Q9BYQ3 159 aa7.09□□□□□ -1.28
DDB1-216ENST00000539739 KRTAP9-2Q9BYQ4 174 aa7.06□□□□□ -1.28
DDB1-216ENST00000539739 CAMK2N1Q7Z7J9 78 aa7.01□□□□□ -1.29
DDB1-216ENST00000539739 SPRR2GQ9BYE4 73 aa6.94□□□□□ -1.3
DDB1-216ENST00000539739 KRTAP19-1Q8IUB9 90 aa6.94□□□□□ -1.3
DDB1-216ENST00000539739 R4GN34 69 aa6.93□□□□□ -1.3
DDB1-216ENST00000539739 M0QZ58 72 aa6.88□□□□□ -1.31
DDB1-216ENST00000539739 C10orf95Q9H7T3 257 aa6.88□□□□□ -1.31
DDB1-216ENST00000539739 KRTAP19-8Q3LI54 63 aa6.82□□□□□ -1.32
DDB1-216ENST00000539739 USH2AO75445 5202 aa6.81□□□□□ -1.32
DDB1-216ENST00000539739 PLAC4Q8WY50 150 aa6.79□□□□□ -1.32
DDB1-216ENST00000539739 CRCT1Q9UGL9 99 aa6.76□□□□□ -1.33
DDB1-216ENST00000539739 FSIP2Q5CZC0 6907 aa6.75□□□□□ -1.33
DDB1-216ENST00000539739 MT1BP07438 61 aa6.74□□□□□ -1.33
DDB1-216ENST00000539739 KRTAP13-4Q3LI77 160 aa6.7□□□□□ -1.34
DDB1-216ENST00000539739 KRTAP9-6A0A140TA67 174 aa6.68□□□□□ -1.34
DDB1-216ENST00000539739 A0A0D9SG42 100 aa6.65□□□□□ -1.34
DDB1-216ENST00000539739 SSPOA2VEC9 5147 aa6.64□□□□□ -1.35
DDB1-216ENST00000539739 KRTAP19-6Q3LI70 58 aa6.64□□□□□ -1.35
DDB1-216ENST00000539739 PRO2289Q9P1D8 64 aa6.61□□□□□ -1.35
DDB1-216ENST00000539739 KRTAP12-1P59990 96 aa6.58□□□□□ -1.36
DDB1-216ENST00000539739 KRTAP12-2P59991 146 aa6.57□□□□□ -1.36
DDB1-216ENST00000539739 PP632Q6XCG6 107 aa6.52□□□□□ -1.37
DDB1-216ENST00000539739 KRTAP10-5P60370 271 aa6.5□□□□□ -1.37
DDB1-216ENST00000539739 FCGBPQ9Y6R7 5405 aaPredicted RBP6.46□□□□□ -1.37
DDB1-216ENST00000539739 MT1XP80297 61 aa6.43□□□□□ -1.38
DDB1-216ENST00000539739 INE1O15225 51 aa6.41□□□□□ -1.38
DDB1-216ENST00000539739 SPRR5A0A1B0GTR4 108 aa6.29□□□□□ -1.4
DDB1-216ENST00000539739 KRTAP9-1A8MXZ3 250 aaPredicted RBP6.25□□□□□ -1.41
DDB1-216ENST00000539739 KRTAP23-1A1A580 65 aa6.2□□□□□ -1.42
DDB1-216ENST00000539739 MACF1Q9UPN3 7388 aaKnown RBP6.18□□□□□ -1.42
DDB1-216ENST00000539739 KRTAP10-7P60409 375 aaPredicted RBP6.16□□□□□ -1.42
DDB1-216ENST00000539739 KRTAP10-12P60413 245 aa6.12□□□□□ -1.43
DDB1-216ENST00000539739 TNP1P09430 55 aa6.07□□□□□ -1.44
DDB1-216ENST00000539739 KRTAP9-7A8MTY7 169 aa6.06□□□□□ -1.44
DDB1-216ENST00000539739 KMT2DO14686 5537 aa6.01□□□□□ -1.45
DDB1-216ENST00000539739 KRTAP6-3Q3LI67 103 aa6.01□□□□□ -1.45
DDB1-216ENST00000539739 KRTAP8-1Q8IUC2 63 aa6.01□□□□□ -1.45
DDB1-216ENST00000539739 KRTAP4-8A0A0G2JLE6 195 aa6□□□□□ -1.45
DDB1-216ENST00000539739 KRTAP4-8Q9BYQ9 185 aa6□□□□□ -1.45
DDB1-216ENST00000539739 SYNE2Q8WXH0 6885 aaKnown RBP5.99□□□□□ -1.45
DDB1-216ENST00000539739 KRTAP5-9P26371 169 aa5.92□□□□□ -1.46
DDB1-216ENST00000539739 SPRR2FQ96RM1 72 aa5.88□□□□□ -1.47
Retrieved 100 of 20,778 RNA–protein pairs in 153.4 ms