RNA–Protein interactions for RNA: ENST00000539303.5

SNHG1-210, Transcript of small nucleolar RNA host gene 1, humanhuman

TSL 3 BASIC

Gene SNHG1, Length 240 nt, Biotype lincRNA, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG1-210ENST00000539303 ANK3Q12955 4377 aaKnown RBP-0.18□□□□□ -2.44
SNHG1-210ENST00000539303 SPTBN5Q9NRC6 3674 aaKnown RBP-0.18□□□□□ -2.44
SNHG1-210ENST00000539303 HERC2O95714 4834 aa-0.19□□□□□ -2.44
SNHG1-210ENST00000539303 SMIM2Q9BVW6 85 aa-0.19□□□□□ -2.44
SNHG1-210ENST00000539303 LAMA1P25391 3075 aa-0.2□□□□□ -2.44
SNHG1-210ENST00000539303 LINC01546A6NGU7 62 aa-0.2□□□□□ -2.44
SNHG1-210ENST00000539303 M0QZ58 72 aa-0.2□□□□□ -2.44
SNHG1-210ENST00000539303 DNAH1Q9P2D7 4330 aa-0.2□□□□□ -2.44
SNHG1-210ENST00000539303 RIF1Q5UIP0 2472 aaKnown RBP-0.2□□□□□ -2.44
SNHG1-210ENST00000539303 MUC17Q685J3 4493 aa-0.21□□□□□ -2.44
SNHG1-210ENST00000539303 A0A0C4DFX4 3053 aa-0.21□□□□□ -2.44
SNHG1-210ENST00000539303 DEFB131AP59861 70 aa-0.21□□□□□ -2.44
SNHG1-210ENST00000539303 KRTAP19-8Q3LI54 63 aa-0.21□□□□□ -2.44
SNHG1-210ENST00000539303 CLPSL2Q6UWE3 100 aa-0.21□□□□□ -2.44
SNHG1-210ENST00000539303 MGAM2Q2M2H8 2515 aa-0.21□□□□□ -2.44
SNHG1-210ENST00000539303 WDR87Q6ZQQ6 2873 aa-0.21□□□□□ -2.44
SNHG1-210ENST00000539303 COL6A5A8TX70 2615 aa-0.21□□□□□ -2.44
SNHG1-210ENST00000539303 KRTAP20-2Q3LI61 65 aa-0.22□□□□□ -2.44
SNHG1-210ENST00000539303 DNAH2Q9P225 4427 aa-0.23□□□□□ -2.45
SNHG1-210ENST00000539303 DNAH7Q8WXX0 4024 aa-0.23□□□□□ -2.45
SNHG1-210ENST00000539303 USH2AO75445 5202 aa-0.23□□□□□ -2.45
SNHG1-210ENST00000539303 CMYA5Q8N3K9 4069 aa-0.23□□□□□ -2.45
SNHG1-210ENST00000539303 DNAH8Q96JB1 4490 aa-0.24□□□□□ -2.45
SNHG1-210ENST00000539303 DNHD1Q96M86 4753 aa-0.24□□□□□ -2.45
SNHG1-210ENST00000539303 DYNC1H1Q14204 4646 aaKnown RBP-0.25□□□□□ -2.45
SNHG1-210ENST00000539303 NFAT5O94916 1531 aa-0.25□□□□□ -2.45
SNHG1-210ENST00000539303 DYNC2H1Q8NCM8 4307 aaKnown RBP-0.26□□□□□ -2.45
SNHG1-210ENST00000539303 PLECQ15149 4684 aaKnown RBP-0.26□□□□□ -2.45
SNHG1-210ENST00000539303 TLN2Q9Y4G6 2542 aa-0.27□□□□□ -2.45
SNHG1-210ENST00000539303 DEFB1P60022 68 aa-0.27□□□□□ -2.45
SNHG1-210ENST00000539303 KRTAP19-5Q3LI72 72 aa-0.27□□□□□ -2.45
SNHG1-210ENST00000539303 RELNP78509 3460 aa-0.27□□□□□ -2.45
SNHG1-210ENST00000539303 TRIOO75962 3097 aa-0.27□□□□□ -2.45
SNHG1-210ENST00000539303 COL12A1Q99715 3063 aa-0.27□□□□□ -2.45
SNHG1-210ENST00000539303 EPPK1P58107 5090 aaKnown RBP-0.27□□□□□ -2.45
SNHG1-210ENST00000539303 CLTCL1P53675 1640 aa-0.27□□□□□ -2.45
SNHG1-210ENST00000539303 BIRC6Q9NR09 4857 aa-0.27□□□□□ -2.45
SNHG1-210ENST00000539303 RYR1P21817 5038 aa-0.28□□□□□ -2.45
SNHG1-210ENST00000539303 NEBP20929 6669 aa-0.28□□□□□ -2.45
SNHG1-210ENST00000539303 KRTAP8-1Q8IUC2 63 aa-0.28□□□□□ -2.45
SNHG1-210ENST00000539303 RANBP2P49792 3224 aaKnown RBP-0.28□□□□□ -2.45
SNHG1-210ENST00000539303 SPART-AS1P0CW21 52 aa-0.29□□□□□ -2.46
SNHG1-210ENST00000539303 MT4P47944 62 aa-0.29□□□□□ -2.46
SNHG1-210ENST00000539303 TRPM2O94759 1503 aa-0.29□□□□□ -2.46
SNHG1-210ENST00000539303 ITPR3Q14573 2671 aa-0.3□□□□□ -2.46
SNHG1-210ENST00000539303 HYDINQ4G0P3 5121 aa-0.3□□□□□ -2.46
SNHG1-210ENST00000539303 NDUFA1O15239 70 aa-0.3□□□□□ -2.46
SNHG1-210ENST00000539303 SMR3BP02814 79 aaPredicted RBP-0.3□□□□□ -2.46
SNHG1-210ENST00000539303 POLR2KP53803 58 aaKnown RBP-0.3□□□□□ -2.46
SNHG1-210ENST00000539303 USP9XQ93008 2570 aaPredicted RBP-0.3□□□□□ -2.46
SNHG1-210ENST00000539303 TOMM5Q8N4H5 51 aa-0.31□□□□□ -2.46
SNHG1-210ENST00000539303 DNAH10Q8IVF4 4471 aa-0.31□□□□□ -2.46
SNHG1-210ENST00000539303 DNAH17Q9UFH2 4485 aa-0.31□□□□□ -2.46
SNHG1-210ENST00000539303 USP9YO00507 2555 aaPredicted RBP-0.31□□□□□ -2.46
SNHG1-210ENST00000539303 IQGAP2Q13576 1575 aa-0.32□□□□□ -2.46
SNHG1-210ENST00000539303 ITPR1Q14643 2758 aa-0.32□□□□□ -2.46
SNHG1-210ENST00000539303 CELSR3Q9NYQ7 3312 aa-0.33□□□□□ -2.46
SNHG1-210ENST00000539303 RNF213Q63HN8 5207 aa-0.33□□□□□ -2.46
SNHG1-210ENST00000539303 SRCAPQ6ZRS2 3230 aa-0.34□□□□□ -2.46
SNHG1-210ENST00000539303 TRRAPQ9Y4A5 3859 aa-0.34□□□□□ -2.46
SNHG1-210ENST00000539303 MT1HP80294 61 aa-0.34□□□□□ -2.46
SNHG1-210ENST00000539303 LAMA3Q16787 3333 aa-0.35□□□□□ -2.46
SNHG1-210ENST00000539303 DOPEY1Q5JWR5 2465 aa-0.35□□□□□ -2.46
SNHG1-210ENST00000539303 CSMD1Q96PZ7 3565 aa-0.35□□□□□ -2.46
SNHG1-210ENST00000539303 DNAH5Q8TE73 4624 aa-0.35□□□□□ -2.47
SNHG1-210ENST00000539303 FRYQ5TBA9 3013 aa-0.35□□□□□ -2.47
SNHG1-210ENST00000539303 RYR2Q92736 4967 aa-0.36□□□□□ -2.47
SNHG1-210ENST00000539303 SMG1Q96Q15 3661 aaKnown RBP-0.36□□□□□ -2.47
SNHG1-210ENST00000539303 RYR3Q15413 4870 aa-0.36□□□□□ -2.47
SNHG1-210ENST00000539303 ZFHX4Q86UP3 3567 aa-0.36□□□□□ -2.47
SNHG1-210ENST00000539303 KIAA1109Q2LD37 5005 aa-0.38□□□□□ -2.47
SNHG1-210ENST00000539303 C5orf42Q9H799 3197 aa-0.38□□□□□ -2.47
SNHG1-210ENST00000539303 NIPBLQ6KC79 2804 aaeCLIP-0.39□□□□□ -2.471e-26■■■■□ 26.6
SNHG1-210ENST00000539303 CHD7Q9P2D1 2997 aa-0.4□□□□□ -2.47
SNHG1-210ENST00000539303 TEX15Q9BXT5 2789 aa-0.4□□□□□ -2.47
SNHG1-210ENST00000539303 VPS13CQ709C8 3753 aa-0.4□□□□□ -2.47
SNHG1-210ENST00000539303 ADGRG4Q8IZF6 3080 aa-0.41□□□□□ -2.47
SNHG1-210ENST00000539303 LAMA2P24043 3122 aaKnown RBP-0.42□□□□□ -2.48
SNHG1-210ENST00000539303 SPTAN1Q13813 2472 aaKnown RBP-0.42□□□□□ -2.48
SNHG1-210ENST00000539303 EYSQ5T1H1 3165 aa-0.44□□□□□ -2.48
SNHG1-210ENST00000539303 MGAQ8IWI9 3026 aa-0.44□□□□□ -2.48
SNHG1-210ENST00000539303 MT1XP80297 61 aa-0.46□□□□□ -2.48
SNHG1-210ENST00000539303 MYO15AQ9UKN7 3530 aa-0.46□□□□□ -2.48
SNHG1-210ENST00000539303 LRBAP50851 2863 aa-0.47□□□□□ -2.48
SNHG1-210ENST00000539303 ATP7AQ04656 1500 aa-0.48□□□□□ -2.49
SNHG1-210ENST00000539303 CSMD2Q7Z408 3487 aa-0.48□□□□□ -2.49
SNHG1-210ENST00000539303 MT1EP04732 61 aa-0.48□□□□□ -2.49
SNHG1-210ENST00000539303 MT1GP13640 62 aa-0.48□□□□□ -2.49
SNHG1-210ENST00000539303 LEAP2Q969E1 77 aa-0.48□□□□□ -2.49
SNHG1-210ENST00000539303 MYO9AB2RTY4 2548 aa-0.49□□□□□ -2.49
SNHG1-210ENST00000539303 CFAP46Q8IYW2 2715 aa-0.5□□□□□ -2.49
SNHG1-210ENST00000539303 CRYBG3Q68DQ2 2970 aa-0.5□□□□□ -2.49
SNHG1-210ENST00000539303 SAMD9LQ8IVG5 1584 aa-0.5□□□□□ -2.49
SNHG1-210ENST00000539303 DMDP11532 3685 aa-0.5□□□□□ -2.49
SNHG1-210ENST00000539303 MT1LQ93083 61 aa-0.51□□□□□ -2.49
SNHG1-210ENST00000539303 ABCA13Q86UQ4 5058 aa-0.52□□□□□ -2.49
SNHG1-210ENST00000539303 TOMM7Q9P0U1 55 aa-0.52□□□□□ -2.49
SNHG1-210ENST00000539303 CEP295Q9C0D2 2601 aa-0.53□□□□□ -2.49
SNHG1-210ENST00000539303 RPL39P62891 51 aaKnown RBP-0.55□□□□□ -2.5
SNHG1-210ENST00000539303 DMXL2Q8TDJ6 3036 aa-0.56□□□□□ -2.5
Retrieved 100 of 20,778 RNA–protein pairs in 14.1 ms