RNA–Protein interactions for RNA: ENST00000539148.3

CLPB-210, Transcript of ClpB homolog, mitochondrial AAA ATPase chaperonin, humanhuman

TSL 5

Gene CLPB, Length 564 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLPB-210ENST00000539148 LINC01558Q9Y6Z2 57 aa5.31□□□□□ -1.56
CLPB-210ENST00000539148 MUC17Q685J3 4493 aa5.31□□□□□ -1.56
CLPB-210ENST00000539148 PRR15LQ9BU68 103 aa5.3□□□□□ -1.56
CLPB-210ENST00000539148 COX6B2Q6YFQ2 88 aa5.29□□□□□ -1.56
CLPB-210ENST00000539148 KRTAP9-2Q9BYQ4 174 aa5.27□□□□□ -1.57
CLPB-210ENST00000539148 PRO0628Q9UI54 55 aa5.26□□□□□ -1.57
CLPB-210ENST00000539148 KRTAP4-1Q9BYQ7 146 aa5.24□□□□□ -1.57
CLPB-210ENST00000539148 PSPHP1O15172 72 aa5.23□□□□□ -1.57
CLPB-210ENST00000539148 Q5VV11 94 aa5.21□□□□□ -1.58
CLPB-210ENST00000539148 SEC61GP60059 68 aa5.2□□□□□ -1.58
CLPB-210ENST00000539148 BRK1Q8WUW1 75 aa5.2□□□□□ -1.58
CLPB-210ENST00000539148 A0A1B0GU69 56 aa5.18□□□□□ -1.58
CLPB-210ENST00000539148 LCE2AQ5TA79 106 aaPredicted RBP5.18□□□□□ -1.58
CLPB-210ENST00000539148 KRTAP9-6A0A140TA67 174 aa5.17□□□□□ -1.58
CLPB-210ENST00000539148 H1FX-AS1Q4G0G2 97 aa5.16□□□□□ -1.58
CLPB-210ENST00000539148 A6NED7 52 aa5.15□□□□□ -1.59
CLPB-210ENST00000539148 CDC42SE1Q9NRR8 79 aa5.13□□□□□ -1.59
CLPB-210ENST00000539148 M0R2T5 61 aa5.1□□□□□ -1.59
CLPB-210ENST00000539148 UQCR11O14957 56 aa5.1□□□□□ -1.59
CLPB-210ENST00000539148 KRTAP19-2Q3LHN2 52 aa5.08□□□□□ -1.6
CLPB-210ENST00000539148 KRTAP3-1Q9BYR8 98 aa5.08□□□□□ -1.6
CLPB-210ENST00000539148 FSIP2Q5CZC0 6907 aa5.07□□□□□ -1.6
CLPB-210ENST00000539148 LCE2CQ5TA81 110 aa5.07□□□□□ -1.6
CLPB-210ENST00000539148 S4R3F8 94 aa5.07□□□□□ -1.6
CLPB-210ENST00000539148 MT1HP80294 61 aa5.03□□□□□ -1.6
CLPB-210ENST00000539148 SPATA8Q6RVD6 105 aa5.03□□□□□ -1.6
CLPB-210ENST00000539148 CSAG1Q6PB30 78 aa5.02□□□□□ -1.61
CLPB-210ENST00000539148 MIR22HGQ0VDD5 57 aa5.01□□□□□ -1.61
CLPB-210ENST00000539148 LCA10Q71F78 164 aa5□□□□□ -1.61
CLPB-210ENST00000539148 PMAIP1Q13794 54 aa4.97□□□□□ -1.61
CLPB-210ENST00000539148 A0A1B0GU33 70 aa4.96□□□□□ -1.62
CLPB-210ENST00000539148 LCE2DQ5TA82 110 aaPredicted RBP4.96□□□□□ -1.62
CLPB-210ENST00000539148 CRCT1Q9UGL9 99 aa4.94□□□□□ -1.62
CLPB-210ENST00000539148 H0YAA0 97 aa4.9□□□□□ -1.63
CLPB-210ENST00000539148 K7ERS5 55 aa4.9□□□□□ -1.63
CLPB-210ENST00000539148 KRTAP10-6P60371 365 aaPredicted RBP4.9□□□□□ -1.63
CLPB-210ENST00000539148 KRTAP3-3Q9BYR6 98 aa4.9□□□□□ -1.63
CLPB-210ENST00000539148 FLGP20930 4061 aaPredicted RBP4.87□□□□□ -1.63
CLPB-210ENST00000539148 A6NN06 94 aa4.86□□□□□ -1.63
CLPB-210ENST00000539148 LORP23490 312 aaPredicted RBP4.86□□□□□ -1.63
CLPB-210ENST00000539148 A8MU10 97 aa4.83□□□□□ -1.64
CLPB-210ENST00000539148 KTN1-AS1Q86SY8 53 aa4.83□□□□□ -1.64
CLPB-210ENST00000539148 M0QZ58 72 aa4.82□□□□□ -1.64
CLPB-210ENST00000539148 KRTAP10-10P60014 251 aa4.81□□□□□ -1.64
CLPB-210ENST00000539148 CRIPTQ9P021 101 aa4.8□□□□□ -1.64
CLPB-210ENST00000539148 KRTAP9-8Q9BYQ0 159 aa4.79□□□□□ -1.64
CLPB-210ENST00000539148 MT2AP02795 61 aa4.78□□□□□ -1.64
CLPB-210ENST00000539148 KRTAP3-2Q9BYR7 98 aa4.78□□□□□ -1.64
CLPB-210ENST00000539148 ADM2Q7Z4H4 148 aa4.77□□□□□ -1.65
CLPB-210ENST00000539148 SSPOA2VEC9 5147 aa4.75□□□□□ -1.65
CLPB-210ENST00000539148 MT1FP04733 61 aa4.72□□□□□ -1.65
CLPB-210ENST00000539148 USH2AO75445 5202 aa4.72□□□□□ -1.65
CLPB-210ENST00000539148 P0C880 135 aa4.7□□□□□ -1.66
CLPB-210ENST00000539148 R4GN34 69 aa4.7□□□□□ -1.66
CLPB-210ENST00000539148 KRTAP9-3Q9BYQ3 159 aa4.64□□□□□ -1.67
CLPB-210ENST00000539148 KRTAP9-7A8MTY7 169 aa4.62□□□□□ -1.67
CLPB-210ENST00000539148 KRTAP9-1A8MXZ3 250 aaPredicted RBP4.62□□□□□ -1.67
CLPB-210ENST00000539148 SPRR2GQ9BYE4 73 aa4.62□□□□□ -1.67
CLPB-210ENST00000539148 FCGBPQ9Y6R7 5405 aaPredicted RBP4.61□□□□□ -1.67
CLPB-210ENST00000539148 KRTAP13-4Q3LI77 160 aa4.61□□□□□ -1.67
CLPB-210ENST00000539148 A0A0D9SG42 100 aa4.6□□□□□ -1.67
CLPB-210ENST00000539148 ROMO1P60602 79 aa4.6□□□□□ -1.67
CLPB-210ENST00000539148 KRTAP19-1Q8IUB9 90 aa4.56□□□□□ -1.68
CLPB-210ENST00000539148 MACF1Q9UPN3 7388 aaKnown RBP4.56□□□□□ -1.68
CLPB-210ENST00000539148 SYNE2Q8WXH0 6885 aaKnown RBP4.55□□□□□ -1.68
CLPB-210ENST00000539148 KRTAP12-1P59990 96 aa4.55□□□□□ -1.68
CLPB-210ENST00000539148 LINC01554Q52M75 96 aa4.54□□□□□ -1.68
CLPB-210ENST00000539148 SPINT4Q6UDR6 99 aa4.53□□□□□ -1.68
CLPB-210ENST00000539148 PLAC4Q8WY50 150 aa4.53□□□□□ -1.68
CLPB-210ENST00000539148 KRTAP19-8Q3LI54 63 aa4.52□□□□□ -1.69
CLPB-210ENST00000539148 LCE2BO14633 110 aa4.5□□□□□ -1.69
CLPB-210ENST00000539148 KRTAP12-2P59991 146 aa4.5□□□□□ -1.69
CLPB-210ENST00000539148 KRTAP25-1Q3LHN0 102 aa4.47□□□□□ -1.69
CLPB-210ENST00000539148 PRAC1Q96KF2 57 aa4.46□□□□□ -1.7
CLPB-210ENST00000539148 PRO2289Q9P1D8 64 aa4.43□□□□□ -1.7
CLPB-210ENST00000539148 MT1BP07438 61 aa4.41□□□□□ -1.7
CLPB-210ENST00000539148 CAMK2N1Q7Z7J9 78 aa4.4□□□□□ -1.71
CLPB-210ENST00000539148 KRTAP19-6Q3LI70 58 aa4.37□□□□□ -1.71
CLPB-210ENST00000539148 NEBP20929 6669 aa4.36□□□□□ -1.71
CLPB-210ENST00000539148 PP632Q6XCG6 107 aa4.32□□□□□ -1.72
CLPB-210ENST00000539148 KRTAP10-5P60370 271 aa4.3□□□□□ -1.72
CLPB-210ENST00000539148 KRTAP23-1A1A580 65 aa4.29□□□□□ -1.72
CLPB-210ENST00000539148 MUC12Q9UKN1 5478 aa4.27□□□□□ -1.73
CLPB-210ENST00000539148 C10orf95Q9H7T3 257 aa4.26□□□□□ -1.73
CLPB-210ENST00000539148 TNP1P09430 55 aa4.25□□□□□ -1.73
CLPB-210ENST00000539148 MT1XP80297 61 aa4.23□□□□□ -1.73
CLPB-210ENST00000539148 KRTAP6-3Q3LI67 103 aa4.23□□□□□ -1.73
CLPB-210ENST00000539148 H3BS24 57 aa4.15□□□□□ -1.75
CLPB-210ENST00000539148 MDN1Q9NU22 5596 aa4.13□□□□□ -1.75
CLPB-210ENST00000539148 KMT2DO14686 5537 aa4.08□□□□□ -1.76
CLPB-210ENST00000539148 KRTAP10-12P60413 245 aa4.06□□□□□ -1.76
CLPB-210ENST00000539148 KRTAP20-1Q3LI63 56 aa4.04□□□□□ -1.76
CLPB-210ENST00000539148 KRTAP10-7P60409 375 aaPredicted RBP4.03□□□□□ -1.76
CLPB-210ENST00000539148 KRTAP8-1Q8IUC2 63 aa4□□□□□ -1.77
CLPB-210ENST00000539148 KRTAP15-1Q3LI76 137 aa3.96□□□□□ -1.78
CLPB-210ENST00000539148 KRTAP5-9P26371 169 aa3.95□□□□□ -1.78
CLPB-210ENST00000539148 KRTAP4-8A0A0G2JLE6 195 aa3.9□□□□□ -1.79
CLPB-210ENST00000539148 KRTAP4-8Q9BYQ9 185 aa3.9□□□□□ -1.79
CLPB-210ENST00000539148 LCE3AQ5TA76 89 aa3.87□□□□□ -1.79
CLPB-210ENST00000539148 SPRR2FQ96RM1 72 aa3.87□□□□□ -1.79
Retrieved 100 of 20,778 RNA–protein pairs in 65.8 ms