RNA–Protein interactions for RNA: ENST00000538941.6

SCAPER-203, Transcript of S-phase cyclin A associated protein in the ER, humanhuman

TSL 1 (best) BASIC

Gene SCAPER, Length 4,853 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAPER-203ENST00000538941 TNP1P09430 55 aa3.33□□□□□ -1.88
SCAPER-203ENST00000538941 DNAH17Q9UFH2 4485 aa3.32□□□□□ -1.88
SCAPER-203ENST00000538941 VPS13DQ5THJ4 4388 aa3.3□□□□□ -1.88
SCAPER-203ENST00000538941 LCE2DQ5TA82 110 aaPredicted RBP3.28□□□□□ -1.88
SCAPER-203ENST00000538941 CMYA5Q8N3K9 4069 aa3.27□□□□□ -1.89
SCAPER-203ENST00000538941 KRTAP10-4P60372 401 aaPredicted RBP3.26□□□□□ -1.89
SCAPER-203ENST00000538941 KRTAP23-1A1A580 65 aa3.25□□□□□ -1.89
SCAPER-203ENST00000538941 DNAH2Q9P225 4427 aa3.24□□□□□ -1.89
SCAPER-203ENST00000538941 DYNC2H1Q8NCM8 4307 aaKnown RBP3.24□□□□□ -1.89
SCAPER-203ENST00000538941 FRAS1Q86XX4 4008 aa3.24□□□□□ -1.89
SCAPER-203ENST00000538941 LYSTQ99698 3801 aa3.23□□□□□ -1.89
SCAPER-203ENST00000538941 STARD9Q9P2P6 4700 aa3.22□□□□□ -1.89
SCAPER-203ENST00000538941 DNAH11Q96DT5 4516 aa3.21□□□□□ -1.89
SCAPER-203ENST00000538941 HECTD4Q9Y4D8 3996 aa3.2□□□□□ -1.9
SCAPER-203ENST00000538941 DNAH7Q8WXX0 4024 aa3.17□□□□□ -1.9
SCAPER-203ENST00000538941 KMT2AQ03164 3969 aa3.16□□□□□ -1.9
SCAPER-203ENST00000538941 LRP1BQ9NZR2 4599 aa3.15□□□□□ -1.9
SCAPER-203ENST00000538941 DNAH6Q9C0G6 4158 aa3.14□□□□□ -1.91
SCAPER-203ENST00000538941 DNAH5Q8TE73 4624 aa3.14□□□□□ -1.91
SCAPER-203ENST00000538941 DNHD1Q96M86 4753 aa3.12□□□□□ -1.91
SCAPER-203ENST00000538941 MT1HL1P0DM35 61 aa3.12□□□□□ -1.91
SCAPER-203ENST00000538941 VPS13BQ7Z7G8 4022 aa3.11□□□□□ -1.91
SCAPER-203ENST00000538941 SACSQ9NZJ4 4579 aa3.11□□□□□ -1.91
SCAPER-203ENST00000538941 PRKDCP78527 4128 aaKnown RBP3.07□□□□□ -1.92
SCAPER-203ENST00000538941 LORP23490 312 aaPredicted RBP3.05□□□□□ -1.92
SCAPER-203ENST00000538941 DYNC1H1Q14204 4646 aaKnown RBP3.03□□□□□ -1.92
SCAPER-203ENST00000538941 FAT2Q9NYQ8 4349 aa3.01□□□□□ -1.93
SCAPER-203ENST00000538941 FAT1Q14517 4588 aa3□□□□□ -1.93
SCAPER-203ENST00000538941 KRTAP4-5Q9BYR2 181 aa2.99□□□□□ -1.93
SCAPER-203ENST00000538941 KRTAP10-10P60014 251 aa2.98□□□□□ -1.93
SCAPER-203ENST00000538941 RYR2Q92736 4967 aa2.95□□□□□ -1.94
SCAPER-203ENST00000538941 PKD1P98161 4303 aa2.93□□□□□ -1.94
SCAPER-203ENST00000538941 FAT3Q8TDW7 4589 aa2.93□□□□□ -1.94
SCAPER-203ENST00000538941 APOBP04114 4563 aaKnown RBP2.92□□□□□ -1.94
SCAPER-203ENST00000538941 BIRC6Q9NR09 4857 aa2.92□□□□□ -1.94
SCAPER-203ENST00000538941 PKHD1L1Q86WI1 4243 aa2.92□□□□□ -1.94
SCAPER-203ENST00000538941 HYDINQ4G0P3 5121 aa2.89□□□□□ -1.95
SCAPER-203ENST00000538941 LCE3AQ5TA76 89 aa2.88□□□□□ -1.95
SCAPER-203ENST00000538941 KRTAP4-1Q9BYQ7 146 aa2.88□□□□□ -1.95
SCAPER-203ENST00000538941 PKHD1P08F94 4074 aa2.87□□□□□ -1.95
SCAPER-203ENST00000538941 LRP1Q07954 4544 aaKnown RBP2.86□□□□□ -1.95
SCAPER-203ENST00000538941 LCE2BO14633 110 aa2.85□□□□□ -1.95
SCAPER-203ENST00000538941 MYCBP2O75592 4640 aa2.85□□□□□ -1.95
SCAPER-203ENST00000538941 RYR1P21817 5038 aa2.84□□□□□ -1.95
SCAPER-203ENST00000538941 KRTAP10-12P60413 245 aa2.83□□□□□ -1.96
SCAPER-203ENST00000538941 KRTAP12-3P60328 96 aa2.82□□□□□ -1.96
SCAPER-203ENST00000538941 SPRR5A0A1B0GTR4 108 aa2.81□□□□□ -1.96
SCAPER-203ENST00000538941 TNXBP22105 4242 aa2.78□□□□□ -1.96
SCAPER-203ENST00000538941 RYR3Q15413 4870 aa2.78□□□□□ -1.96
SCAPER-203ENST00000538941 SPRR2GQ9BYE4 73 aa2.77□□□□□ -1.97
SCAPER-203ENST00000538941 KRTAP17-1Q9BYP8 105 aa2.76□□□□□ -1.97
SCAPER-203ENST00000538941 HSPG2P98160 4391 aa2.76□□□□□ -1.97
SCAPER-203ENST00000538941 HERC2O95714 4834 aa2.76□□□□□ -1.97
SCAPER-203ENST00000538941 KMT2CQ8NEZ4 4911 aaKnown RBP2.72□□□□□ -1.97
SCAPER-203ENST00000538941 LRP2P98164 4655 aa2.72□□□□□ -1.97
SCAPER-203ENST00000538941 KIAA1109Q2LD37 5005 aa2.72□□□□□ -1.97
SCAPER-203ENST00000538941 KRTAP8-1Q8IUC2 63 aa2.71□□□□□ -1.98
SCAPER-203ENST00000538941 LCE2CQ5TA81 110 aa2.71□□□□□ -1.98
SCAPER-203ENST00000538941 KRTAP19-1Q8IUB9 90 aa2.66□□□□□ -1.98
SCAPER-203ENST00000538941 MT2AP02795 61 aa2.65□□□□□ -1.99
SCAPER-203ENST00000538941 MT1HP80294 61 aa2.65□□□□□ -1.99
SCAPER-203ENST00000538941 LPAP08519 4548 aa2.64□□□□□ -1.99
SCAPER-203ENST00000538941 KRTAP19-2Q3LHN2 52 aa2.64□□□□□ -1.99
SCAPER-203ENST00000538941 HERC1Q15751 4861 aa2.63□□□□□ -1.99
SCAPER-203ENST00000538941 EPPK1P58107 5090 aaKnown RBP2.63□□□□□ -1.99
SCAPER-203ENST00000538941 MT1FP04733 61 aa2.63□□□□□ -1.99
SCAPER-203ENST00000538941 KRTAP19-8Q3LI54 63 aa2.59□□□□□ -1.99
SCAPER-203ENST00000538941 PCLOQ9Y6V0 5065 aa2.58□□□□□ -2
SCAPER-203ENST00000538941 LCE3CQ5T5A8 94 aa2.58□□□□□ -2
SCAPER-203ENST00000538941 MUC17Q685J3 4493 aa2.57□□□□□ -2
SCAPER-203ENST00000538941 KRTAP19-5Q3LI72 72 aa2.56□□□□□ -2
SCAPER-203ENST00000538941 LCE2AQ5TA79 106 aaPredicted RBP2.56□□□□□ -2
SCAPER-203ENST00000538941 KRTAP10-5P60370 271 aa2.55□□□□□ -2
SCAPER-203ENST00000538941 MT1XP80297 61 aa2.55□□□□□ -2
SCAPER-203ENST00000538941 ABCA13Q86UQ4 5058 aa2.54□□□□□ -2
SCAPER-203ENST00000538941 KRTAP10-7P60409 375 aaPredicted RBP2.54□□□□□ -2
SCAPER-203ENST00000538941 FLGP20930 4061 aaPredicted RBP2.54□□□□□ -2
SCAPER-203ENST00000538941 MT1BP07438 61 aa2.52□□□□□ -2.01
SCAPER-203ENST00000538941 KRTAP9-8Q9BYQ0 159 aa2.49□□□□□ -2.01
SCAPER-203ENST00000538941 GPR98Q8WXG9 6306 aa2.48□□□□□ -2.01
SCAPER-203ENST00000538941 KRTAP19-4Q3LI73 84 aa2.47□□□□□ -2.01
SCAPER-203ENST00000538941 CRCT1Q9UGL9 99 aa2.45□□□□□ -2.02
SCAPER-203ENST00000538941 HMCN2Q8NDA2 5059 aa2.42□□□□□ -2.02
SCAPER-203ENST00000538941 KRTAP9-3Q9BYQ3 159 aa2.4□□□□□ -2.03
SCAPER-203ENST00000538941 KRTAP4-8A0A0G2JLE6 195 aa2.34□□□□□ -2.04
SCAPER-203ENST00000538941 KRTAP9-2Q9BYQ4 174 aa2.34□□□□□ -2.04
SCAPER-203ENST00000538941 KRTAP4-8Q9BYQ9 185 aa2.34□□□□□ -2.04
SCAPER-203ENST00000538941 RNF213Q63HN8 5207 aa2.31□□□□□ -2.04
SCAPER-203ENST00000538941 KRTAP12-4P60329 112 aa2.29□□□□□ -2.04
SCAPER-203ENST00000538941 KRTAP4-7Q9BYR0 210 aa2.29□□□□□ -2.04
SCAPER-203ENST00000538941 KRTAP2-3P0C7H8 128 aa2.29□□□□□ -2.04
SCAPER-203ENST00000538941 KRTAP2-4Q9BYR9 128 aa2.29□□□□□ -2.04
SCAPER-203ENST00000538941 KRTAP2-1Q9BYU5 128 aa2.29□□□□□ -2.04
SCAPER-203ENST00000538941 MUC2Q02817 5179 aa2.28□□□□□ -2.04
SCAPER-203ENST00000538941 KRTAP9-6A0A140TA67 174 aa2.28□□□□□ -2.05
SCAPER-203ENST00000538941 KRTAP19-6Q3LI70 58 aa2.27□□□□□ -2.05
SCAPER-203ENST00000538941 MT1LQ93083 61 aa2.27□□□□□ -2.05
SCAPER-203ENST00000538941 FAT4Q6V0I7 4981 aa2.25□□□□□ -2.05
SCAPER-203ENST00000538941 MT1GP13640 62 aa2.25□□□□□ -2.05
SCAPER-203ENST00000538941 MT1EP04732 61 aa2.24□□□□□ -2.05
Retrieved 100 of 20,778 RNA–protein pairs in 127.7 ms