RNA–Protein interactions for RNA: ENST00000536548.5

CPSF7-216, Transcript of cleavage and polyadenylation specific factor 7, humanhuman

TSL 4

Gene CPSF7, Length 598 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF7-216ENST00000536548 MIR22HGQ0VDD5 57 aa4.52□□□□□ -1.69
CPSF7-216ENST00000536548 A0A087WTM6 91 aa4.51□□□□□ -1.69
CPSF7-216ENST00000536548 CIRBP-AS1Q8TBR5 109 aa4.5□□□□□ -1.69
CPSF7-216ENST00000536548 IGLV7-43P04211 117 aa4.49□□□□□ -1.69
CPSF7-216ENST00000536548 LINC01554Q52M75 96 aa4.49□□□□□ -1.69
CPSF7-216ENST00000536548 KRTAP10-4P60372 401 aaPredicted RBP4.48□□□□□ -1.69
CPSF7-216ENST00000536548 RETNLBQ9BQ08 111 aa4.48□□□□□ -1.69
CPSF7-216ENST00000536548 MT1HL1P0DM35 61 aa4.47□□□□□ -1.69
CPSF7-216ENST00000536548 PRAC1Q96KF2 57 aa4.47□□□□□ -1.69
CPSF7-216ENST00000536548 ANAPC11Q9NYG5 84 aa4.47□□□□□ -1.69
CPSF7-216ENST00000536548 IGKV2D-30A0A075B6S6 120 aa4.44□□□□□ -1.7
CPSF7-216ENST00000536548 KRTAP16-1A8MUX0 517 aa4.41□□□□□ -1.7
CPSF7-216ENST00000536548 ADM2Q7Z4H4 148 aa4.41□□□□□ -1.7
CPSF7-216ENST00000536548 LCE2AQ5TA79 106 aaPredicted RBP4.38□□□□□ -1.71
CPSF7-216ENST00000536548 Q6ZSA8 131 aa4.38□□□□□ -1.71
CPSF7-216ENST00000536548 CRCT1Q9UGL9 99 aa4.38□□□□□ -1.71
CPSF7-216ENST00000536548 CSAG1Q6PB30 78 aa4.36□□□□□ -1.71
CPSF7-216ENST00000536548 KRTAP13-2Q52LG2 175 aa4.34□□□□□ -1.71
CPSF7-216ENST00000536548 SPINK1P00995 79 aa4.32□□□□□ -1.72
CPSF7-216ENST00000536548 RPS29P62273 56 aaKnown RBP4.29□□□□□ -1.72
CPSF7-216ENST00000536548 A8MUU9 505 aa4.28□□□□□ -1.72
CPSF7-216ENST00000536548 K7ERS5 55 aa4.28□□□□□ -1.72
CPSF7-216ENST00000536548 TYMSOSQ8TAI1 123 aa4.28□□□□□ -1.72
CPSF7-216ENST00000536548 H3BS24 57 aa4.27□□□□□ -1.73
CPSF7-216ENST00000536548 KRTAP25-1Q3LHN0 102 aa4.27□□□□□ -1.73
CPSF7-216ENST00000536548 A0A1B0GU33 70 aa4.26□□□□□ -1.73
CPSF7-216ENST00000536548 KRTAP1-4P0C5Y4 121 aa4.26□□□□□ -1.73
CPSF7-216ENST00000536548 H1FX-AS1Q4G0G2 97 aa4.26□□□□□ -1.73
CPSF7-216ENST00000536548 H0YAA0 97 aa4.25□□□□□ -1.73
CPSF7-216ENST00000536548 LCE2CQ5TA81 110 aa4.23□□□□□ -1.73
CPSF7-216ENST00000536548 LINC00304Q8N9R0 145 aa4.22□□□□□ -1.73
CPSF7-216ENST00000536548 KRTAP10-8P60410 259 aa4.21□□□□□ -1.74
CPSF7-216ENST00000536548 KRTAP9-7A8MTY7 169 aa4.2□□□□□ -1.74
CPSF7-216ENST00000536548 C20orf166-AS1Q96NR2 134 aa4.2□□□□□ -1.74
CPSF7-216ENST00000536548 ROMO1P60602 79 aa4.18□□□□□ -1.74
CPSF7-216ENST00000536548 COX6B2Q6YFQ2 88 aa4.14□□□□□ -1.75
CPSF7-216ENST00000536548 MUC17Q685J3 4493 aa4.14□□□□□ -1.75
CPSF7-216ENST00000536548 KRTAP3-1Q9BYR8 98 aa4.13□□□□□ -1.75
CPSF7-216ENST00000536548 KRTAP9-1A8MXZ3 250 aaPredicted RBP4.11□□□□□ -1.75
CPSF7-216ENST00000536548 C9orf92A6NGG3 77 aa4.1□□□□□ -1.75
CPSF7-216ENST00000536548 RPL37P61927 97 aaKnown RBP4.1□□□□□ -1.75
CPSF7-216ENST00000536548 LORP23490 312 aaPredicted RBP4.09□□□□□ -1.75
CPSF7-216ENST00000536548 SPINT4Q6UDR6 99 aa4.02□□□□□ -1.77
CPSF7-216ENST00000536548 CRIPTQ9P021 101 aa4.01□□□□□ -1.77
CPSF7-216ENST00000536548 KRTAP10-6P60371 365 aaPredicted RBP4□□□□□ -1.77
CPSF7-216ENST00000536548 P0C880 135 aa3.99□□□□□ -1.77
CPSF7-216ENST00000536548 S4R3F8 94 aa3.99□□□□□ -1.77
CPSF7-216ENST00000536548 USH2AO75445 5202 aa3.97□□□□□ -1.77
CPSF7-216ENST00000536548 A0A0D9SG42 100 aa3.96□□□□□ -1.78
CPSF7-216ENST00000536548 TPRXLQ17RH7 258 aa3.96□□□□□ -1.78
CPSF7-216ENST00000536548 SSPOA2VEC9 5147 aa3.96□□□□□ -1.78
CPSF7-216ENST00000536548 SYNE2Q8WXH0 6885 aaKnown RBP3.94□□□□□ -1.78
CPSF7-216ENST00000536548 KRTAP13-4Q3LI77 160 aa3.93□□□□□ -1.78
CPSF7-216ENST00000536548 MACF1Q9UPN3 7388 aaKnown RBP3.93□□□□□ -1.78
CPSF7-216ENST00000536548 LOC100996750A0A140TA64 210 aa3.92□□□□□ -1.78
CPSF7-216ENST00000536548 KRTAP4-6Q9BYQ5 205 aa3.92□□□□□ -1.78
CPSF7-216ENST00000536548 FCGBPQ9Y6R7 5405 aaPredicted RBP3.9□□□□□ -1.78
CPSF7-216ENST00000536548 KRTAP15-1Q3LI76 137 aa3.9□□□□□ -1.79
CPSF7-216ENST00000536548 KRTAP4-1Q9BYQ7 146 aa3.9□□□□□ -1.79
CPSF7-216ENST00000536548 M0QZ58 72 aa3.88□□□□□ -1.79
CPSF7-216ENST00000536548 C10orf95Q9H7T3 257 aa3.87□□□□□ -1.79
CPSF7-216ENST00000536548 KRTAP12-1P59990 96 aa3.86□□□□□ -1.79
CPSF7-216ENST00000536548 NDUFAF8A1L188 74 aa3.85□□□□□ -1.79
CPSF7-216ENST00000536548 KRTAP12-2P59991 146 aa3.85□□□□□ -1.79
CPSF7-216ENST00000536548 MT1HP80294 61 aa3.85□□□□□ -1.79
CPSF7-216ENST00000536548 XP32Q5T750 250 aa3.85□□□□□ -1.79
CPSF7-216ENST00000536548 KRTAP19-2Q3LHN2 52 aa3.81□□□□□ -1.8
CPSF7-216ENST00000536548 FLGP20930 4061 aaPredicted RBP3.78□□□□□ -1.8
CPSF7-216ENST00000536548 M0R2T5 61 aa3.72□□□□□ -1.81
CPSF7-216ENST00000536548 KRTAP19-1Q8IUB9 90 aa3.72□□□□□ -1.81
CPSF7-216ENST00000536548 SEC61BP60468 96 aaKnown RBP3.7□□□□□ -1.82
CPSF7-216ENST00000536548 R4GN34 69 aa3.69□□□□□ -1.82
CPSF7-216ENST00000536548 PLAC4Q8WY50 150 aa3.68□□□□□ -1.82
CPSF7-216ENST00000536548 MUC12Q9UKN1 5478 aa3.67□□□□□ -1.82
CPSF7-216ENST00000536548 NEBP20929 6669 aa3.67□□□□□ -1.82
CPSF7-216ENST00000536548 PP632Q6XCG6 107 aa3.67□□□□□ -1.82
CPSF7-216ENST00000536548 KRTAP6-3Q3LI67 103 aa3.64□□□□□ -1.83
CPSF7-216ENST00000536548 KRTAP20-1Q3LI63 56 aa3.62□□□□□ -1.83
CPSF7-216ENST00000536548 LUZP6Q538Z0 58 aa3.62□□□□□ -1.83
CPSF7-216ENST00000536548 A0A0A0MQY5 61 aa3.59□□□□□ -1.83
CPSF7-216ENST00000536548 KRTAP4-8Q9BYQ9 185 aa3.59□□□□□ -1.83
CPSF7-216ENST00000536548 KRTAP9-8Q9BYQ0 159 aa3.57□□□□□ -1.84
CPSF7-216ENST00000536548 CAMK2N1Q7Z7J9 78 aa3.55□□□□□ -1.84
CPSF7-216ENST00000536548 KRTAP23-1A1A580 65 aa3.52□□□□□ -1.85
CPSF7-216ENST00000536548 KRTAP19-6Q3LI70 58 aa3.49□□□□□ -1.85
CPSF7-216ENST00000536548 KMT2DO14686 5537 aa3.48□□□□□ -1.85
CPSF7-216ENST00000536548 MDN1Q9NU22 5596 aa3.47□□□□□ -1.85
CPSF7-216ENST00000536548 KRTAP9-3Q9BYQ3 159 aa3.47□□□□□ -1.85
CPSF7-216ENST00000536548 MT2AP02795 61 aa3.46□□□□□ -1.86
CPSF7-216ENST00000536548 TNP1P09430 55 aa3.46□□□□□ -1.86
CPSF7-216ENST00000536548 MT1FP04733 61 aa3.44□□□□□ -1.86
CPSF7-216ENST00000536548 KRTAP4-12Q9BQ66 201 aa3.44□□□□□ -1.86
CPSF7-216ENST00000536548 SPRR5A0A1B0GTR4 108 aa3.41□□□□□ -1.86
CPSF7-216ENST00000536548 KRTAP10-10P60014 251 aa3.39□□□□□ -1.87
CPSF7-216ENST00000536548 LCE3BQ5TA77 95 aa3.39□□□□□ -1.87
CPSF7-216ENST00000536548 KRTAP2-3P0C7H8 128 aa3.38□□□□□ -1.87
CPSF7-216ENST00000536548 KRTAP9-9Q9BYP9 154 aa3.38□□□□□ -1.87
CPSF7-216ENST00000536548 KRTAP9-4Q9BYQ2 154 aa3.38□□□□□ -1.87
CPSF7-216ENST00000536548 KRTAP2-4Q9BYR9 128 aa3.38□□□□□ -1.87
CPSF7-216ENST00000536548 GPR98Q8WXG9 6306 aa3.37□□□□□ -1.87
Retrieved 100 of 20,778 RNA–protein pairs in 70.3 ms