RNA–Protein interactions for RNA: ENST00000535406.5

CDCA3-204, Transcript of cell division cycle associated 3, humanhuman

APPRIS P1 TSL 2 BASIC

Gene CDCA3, Length 1,327 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDCA3-204ENST00000535406 TP53AIP1Q9HCN2 124 aa4.47□□□□□ -1.69
CDCA3-204ENST00000535406 ACYP1P07311 99 aa4.44□□□□□ -1.7
CDCA3-204ENST00000535406 FAM240AA0A1B0GVK7 77 aa4.42□□□□□ -1.7
CDCA3-204ENST00000535406 ATP5EP2Q5VTU8 51 aa4.42□□□□□ -1.7
CDCA3-204ENST00000535406 C1orf64Q8NEQ6 169 aa4.42□□□□□ -1.7
CDCA3-204ENST00000535406 FCGBPQ9Y6R7 5405 aaPredicted RBP4.42□□□□□ -1.7
CDCA3-204ENST00000535406 S4R3F8 94 aa4.42□□□□□ -1.7
CDCA3-204ENST00000535406 C5orf47Q569G3 176 aa4.41□□□□□ -1.7
CDCA3-204ENST00000535406 TRAV22A0A0B4J277 110 aa4.4□□□□□ -1.71
CDCA3-204ENST00000535406 HIST1H4AP62805 103 aaKnown RBP4.38□□□□□ -1.71
CDCA3-204ENST00000535406 OCR1Q9BZK8 76 aa4.38□□□□□ -1.71
CDCA3-204ENST00000535406 FAM236AA0A1B0GUQ0 79 aa4.37□□□□□ -1.71
CDCA3-204ENST00000535406 FAM236BA0A1B0GV22 79 aa4.37□□□□□ -1.71
CDCA3-204ENST00000535406 KRTAP19-6Q3LI70 58 aa4.37□□□□□ -1.71
CDCA3-204ENST00000535406 LCA10Q71F78 164 aa4.37□□□□□ -1.71
CDCA3-204ENST00000535406 CYP4F30PQ9H0H9 118 aa4.37□□□□□ -1.71
CDCA3-204ENST00000535406 LOC101927531A0A1B0GV80 90 aa4.36□□□□□ -1.71
CDCA3-204ENST00000535406 CSAG1Q6PB30 78 aa4.36□□□□□ -1.71
CDCA3-204ENST00000535406 UQCRQO14949 82 aa4.33□□□□□ -1.72
CDCA3-204ENST00000535406 H0Y9P7 68 aa4.32□□□□□ -1.72
CDCA3-204ENST00000535406 ATOX1O00244 68 aa4.32□□□□□ -1.72
CDCA3-204ENST00000535406 LINC00643Q86TS7 51 aa4.32□□□□□ -1.72
CDCA3-204ENST00000535406 A0A087WVE0 104 aa4.31□□□□□ -1.72
CDCA3-204ENST00000535406 MACF1Q9UPN3 7388 aaKnown RBP4.29□□□□□ -1.72
CDCA3-204ENST00000535406 SEC61GP60059 68 aa4.28□□□□□ -1.72
CDCA3-204ENST00000535406 KLKP1Q107X0 134 aa4.26□□□□□ -1.73
CDCA3-204ENST00000535406 SPRR2GQ9BYE4 73 aa4.25□□□□□ -1.73
CDCA3-204ENST00000535406 J3QR89 54 aa4.24□□□□□ -1.73
CDCA3-204ENST00000535406 MP68P56378 58 aa4.24□□□□□ -1.73
CDCA3-204ENST00000535406 Q5VV11 94 aa4.24□□□□□ -1.73
CDCA3-204ENST00000535406 LINC00208Q96KT6 92 aa4.24□□□□□ -1.73
CDCA3-204ENST00000535406 A8MUN3 132 aa4.23□□□□□ -1.73
CDCA3-204ENST00000535406 NDUFAF8A1L188 74 aa4.22□□□□□ -1.73
CDCA3-204ENST00000535406 NDUFC1O43677 76 aa4.22□□□□□ -1.73
CDCA3-204ENST00000535406 MT1BP07438 61 aa4.21□□□□□ -1.73
CDCA3-204ENST00000535406 KRTAP19-8Q3LI54 63 aa4.21□□□□□ -1.73
CDCA3-204ENST00000535406 IMUPQ9GZP8 106 aa4.21□□□□□ -1.73
CDCA3-204ENST00000535406 K7ERU9 68 aa4.21□□□□□ -1.74
CDCA3-204ENST00000535406 LCE1AQ5T7P2 110 aa4.21□□□□□ -1.74
CDCA3-204ENST00000535406 CRIPTQ9P021 101 aa4.21□□□□□ -1.74
CDCA3-204ENST00000535406 A6NN06 94 aa4.19□□□□□ -1.74
CDCA3-204ENST00000535406 H0YAA0 97 aa4.19□□□□□ -1.74
CDCA3-204ENST00000535406 SYNE2Q8WXH0 6885 aaKnown RBP4.18□□□□□ -1.74
CDCA3-204ENST00000535406 H3BPC8 53 aa4.17□□□□□ -1.74
CDCA3-204ENST00000535406 SCGB1A1P11684 91 aa4.17□□□□□ -1.74
CDCA3-204ENST00000535406 ADM2Q7Z4H4 148 aa4.14□□□□□ -1.75
CDCA3-204ENST00000535406 KRTAP10-5P60370 271 aa4.13□□□□□ -1.75
CDCA3-204ENST00000535406 KRTAP6-3Q3LI67 103 aa4.13□□□□□ -1.75
CDCA3-204ENST00000535406 DMAC1Q96GE9 116 aa4.11□□□□□ -1.75
CDCA3-204ENST00000535406 MT3P25713 68 aa4.09□□□□□ -1.75
CDCA3-204ENST00000535406 MT-ATP8P03928 68 aa4.07□□□□□ -1.76
CDCA3-204ENST00000535406 C20orf197Q8N268 126 aa4.06□□□□□ -1.76
CDCA3-204ENST00000535406 SMIM20Q8N5G0 67 aa4.05□□□□□ -1.76
CDCA3-204ENST00000535406 R4GN34 69 aa4.05□□□□□ -1.76
CDCA3-204ENST00000535406 TRAV7A0A075B6U4 112 aa4.03□□□□□ -1.76
CDCA3-204ENST00000535406 P0C880 135 aa4.03□□□□□ -1.76
CDCA3-204ENST00000535406 M0QZ58 72 aa4.01□□□□□ -1.77
CDCA3-204ENST00000535406 ACYP2P14621 99 aa4.01□□□□□ -1.77
CDCA3-204ENST00000535406 PLAC4Q8WY50 150 aa4.01□□□□□ -1.77
CDCA3-204ENST00000535406 PRO2289Q9P1D8 64 aa4□□□□□ -1.77
CDCA3-204ENST00000535406 MUC12Q9UKN1 5478 aa4□□□□□ -1.77
CDCA3-204ENST00000535406 SPTSSBQ8NFR3 76 aa3.97□□□□□ -1.77
CDCA3-204ENST00000535406 MT1XP80297 61 aa3.96□□□□□ -1.77
CDCA3-204ENST00000535406 CHKB-CPT1BH3BT56 60 aa3.95□□□□□ -1.78
CDCA3-204ENST00000535406 KRTAP5-9P26371 169 aa3.95□□□□□ -1.78
CDCA3-204ENST00000535406 LINC01554Q52M75 96 aa3.95□□□□□ -1.78
CDCA3-204ENST00000535406 SNURFQ9Y675 71 aa3.95□□□□□ -1.78
CDCA3-204ENST00000535406 NEBP20929 6669 aa3.92□□□□□ -1.78
CDCA3-204ENST00000535406 ANAPC13Q9BS18 74 aa3.92□□□□□ -1.78
CDCA3-204ENST00000535406 KMT2DO14686 5537 aa3.91□□□□□ -1.78
CDCA3-204ENST00000535406 SERP2Q8N6R1 65 aa3.91□□□□□ -1.78
CDCA3-204ENST00000535406 SPANXA2-OT1Q8N9U9 137 aa3.91□□□□□ -1.78
CDCA3-204ENST00000535406 MDN1Q9NU22 5596 aa3.89□□□□□ -1.79
CDCA3-204ENST00000535406 KRTAP12-2P59991 146 aa3.88□□□□□ -1.79
CDCA3-204ENST00000535406 SPRR2FQ96RM1 72 aa3.86□□□□□ -1.79
CDCA3-204ENST00000535406 KRTAP8-1Q8IUC2 63 aa3.85□□□□□ -1.79
CDCA3-204ENST00000535406 KRTAP20-1Q3LI63 56 aa3.84□□□□□ -1.79
CDCA3-204ENST00000535406 CCDC179H3BU77 68 aa3.83□□□□□ -1.8
CDCA3-204ENST00000535406 COA5Q86WW8 74 aa3.8□□□□□ -1.8
CDCA3-204ENST00000535406 KRTAP2-2Q9BYT5 123 aa3.8□□□□□ -1.8
CDCA3-204ENST00000535406 COX7CP15954 63 aa3.79□□□□□ -1.8
CDCA3-204ENST00000535406 SPRR2EP22531 72 aa3.79□□□□□ -1.8
CDCA3-204ENST00000535406 SPRR2BP35325 72 aa3.79□□□□□ -1.8
CDCA3-204ENST00000535406 SPRR2AP35326 72 aa3.79□□□□□ -1.8
CDCA3-204ENST00000535406 KRTAP10-7P60409 375 aaPredicted RBP3.79□□□□□ -1.8
CDCA3-204ENST00000535406 KRTAP13-4Q3LI77 160 aa3.77□□□□□ -1.81
CDCA3-204ENST00000535406 KRTAP10-12P60413 245 aa3.76□□□□□ -1.81
CDCA3-204ENST00000535406 RPS28P62857 69 aaKnown RBP3.74□□□□□ -1.81
CDCA3-204ENST00000535406 CAMK2N1Q7Z7J9 78 aa3.74□□□□□ -1.81
CDCA3-204ENST00000535406 H7BZZ5 65 aa3.73□□□□□ -1.81
CDCA3-204ENST00000535406 SERP1Q9Y6X1 66 aa3.73□□□□□ -1.81
CDCA3-204ENST00000535406 KRTAP2-3P0C7H8 128 aa3.72□□□□□ -1.81
CDCA3-204ENST00000535406 KRTAP2-4Q9BYR9 128 aa3.72□□□□□ -1.81
CDCA3-204ENST00000535406 CYSTM1Q9H1C7 97 aa3.72□□□□□ -1.81
CDCA3-204ENST00000535406 TMEM258P61165 79 aa3.7□□□□□ -1.82
CDCA3-204ENST00000535406 A0A0D9SG42 100 aa3.68□□□□□ -1.82
CDCA3-204ENST00000535406 SPRR2DP22532 72 aa3.68□□□□□ -1.82
CDCA3-204ENST00000535406 LCE1FQ5T754 118 aa3.67□□□□□ -1.82
CDCA3-204ENST00000535406 SPATA8Q6RVD6 105 aa3.67□□□□□ -1.82
CDCA3-204ENST00000535406 A0A1B0GU33 70 aa3.66□□□□□ -1.82
Retrieved 100 of 20,778 RNA–protein pairs in 65 ms