RNA–Protein interactions for RNA: ENST00000535076.5

SNHG1-201, Transcript of small nucleolar RNA host gene 1, humanhuman

TSL 2

Gene SNHG1, Length 849 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG1-201ENST00000535076 NSD1Q96L73 2696 aaPredicted RBP2.42□□□□□ -2.02
SNHG1-201ENST00000535076 J3QKU1 62 aa2.42□□□□□ -2.02
SNHG1-201ENST00000535076 JMJD1CQ15652 2540 aa2.41□□□□□ -2.02
SNHG1-201ENST00000535076 SONP18583 2426 aaKnown RBP2.41□□□□□ -2.02
SNHG1-201ENST00000535076 HTN3P15516 51 aa2.41□□□□□ -2.02
SNHG1-201ENST00000535076 ATRQ13535 2644 aa2.4□□□□□ -2.02
SNHG1-201ENST00000535076 VWFP04275 2813 aa2.4□□□□□ -2.03
SNHG1-201ENST00000535076 CSMD2Q7Z408 3487 aa2.4□□□□□ -2.03
SNHG1-201ENST00000535076 VPS13CQ709C8 3753 aa2.39□□□□□ -2.03
SNHG1-201ENST00000535076 COL6A5A8TX70 2615 aa2.39□□□□□ -2.03
SNHG1-201ENST00000535076 DEFB135Q30KP9 77 aa2.39□□□□□ -2.03
SNHG1-201ENST00000535076 FBN1P35555 2871 aaKnown RBP2.39□□□□□ -2.03
SNHG1-201ENST00000535076 ZNF469Q96JG9 3925 aaPredicted RBP2.38□□□□□ -2.03
SNHG1-201ENST00000535076 TENM1Q9UKZ4 2725 aa2.37□□□□□ -2.03
SNHG1-201ENST00000535076 STAB1Q9NY15 2570 aa2.37□□□□□ -2.03
SNHG1-201ENST00000535076 RPS29P62273 56 aaKnown RBP2.36□□□□□ -2.03
SNHG1-201ENST00000535076 DEFB4AO15263 64 aa2.35□□□□□ -2.03
SNHG1-201ENST00000535076 PKD1L1Q8TDX9 2849 aa2.35□□□□□ -2.03
SNHG1-201ENST00000535076 OBSCNQ5VST9 7968 aa2.34□□□□□ -2.03
SNHG1-201ENST00000535076 NBEAL1Q6ZS30 2694 aa2.33□□□□□ -2.04
SNHG1-201ENST00000535076 KRTAP13-2Q52LG2 175 aa2.33□□□□□ -2.04
SNHG1-201ENST00000535076 SRRM2Q9UQ35 2752 aaKnown RBP2.33□□□□□ -2.04
SNHG1-201ENST00000535076 MEGF8Q7Z7M0 2845 aa2.32□□□□□ -2.04
SNHG1-201ENST00000535076 SVEP1Q4LDE5 3571 aa2.31□□□□□ -2.04
SNHG1-201ENST00000535076 VPS13DQ5THJ4 4388 aa2.31□□□□□ -2.04
SNHG1-201ENST00000535076 ANK3Q12955 4377 aaKnown RBP2.31□□□□□ -2.04
SNHG1-201ENST00000535076 MGAM2Q2M2H8 2515 aa2.29□□□□□ -2.04
SNHG1-201ENST00000535076 NOTCH1P46531 2555 aa2.28□□□□□ -2.04
SNHG1-201ENST00000535076 LCE3AQ5TA76 89 aa2.27□□□□□ -2.05
SNHG1-201ENST00000535076 KRTAP4-3Q9BYR4 195 aa2.27□□□□□ -2.05
SNHG1-201ENST00000535076 DMBT1Q9UGM3 2413 aaPredicted RBP2.27□□□□□ -2.05
SNHG1-201ENST00000535076 CUBNO60494 3623 aa2.27□□□□□ -2.05
SNHG1-201ENST00000535076 SMR3AQ99954 134 aa2.26□□□□□ -2.05
SNHG1-201ENST00000535076 TGP01266 2768 aa2.25□□□□□ -2.05
SNHG1-201ENST00000535076 FBN3Q75N90 2809 aa2.24□□□□□ -2.05
SNHG1-201ENST00000535076 KRTAP1-4P0C5Y4 121 aa2.24□□□□□ -2.05
SNHG1-201ENST00000535076 TRRAPQ9Y4A5 3859 aa2.23□□□□□ -2.05
SNHG1-201ENST00000535076 ANK2Q01484 3957 aa2.21□□□□□ -2.06
SNHG1-201ENST00000535076 CMYA5Q8N3K9 4069 aa2.2□□□□□ -2.06
SNHG1-201ENST00000535076 KRTAP21-3Q3LHN1 58 aa2.2□□□□□ -2.06
SNHG1-201ENST00000535076 DNAH1Q9P2D7 4330 aa2.19□□□□□ -2.06
SNHG1-201ENST00000535076 TNP1P09430 55 aa2.18□□□□□ -2.06
SNHG1-201ENST00000535076 KRTAP10-10P60014 251 aa2.18□□□□□ -2.06
SNHG1-201ENST00000535076 COL7A1Q02388 2944 aa2.18□□□□□ -2.06
SNHG1-201ENST00000535076 NBEAL2Q6ZNJ1 2754 aa2.17□□□□□ -2.06
SNHG1-201ENST00000535076 FRAS1Q86XX4 4008 aa2.17□□□□□ -2.06
SNHG1-201ENST00000535076 TENM3Q9P273 2699 aa2.16□□□□□ -2.06
SNHG1-201ENST00000535076 STAB2Q8WWQ8 2551 aa2.16□□□□□ -2.06
SNHG1-201ENST00000535076 DNAH11Q96DT5 4516 aa2.16□□□□□ -2.06
SNHG1-201ENST00000535076 DNAH3Q8TD57 4116 aa2.15□□□□□ -2.07
SNHG1-201ENST00000535076 DNHD1Q96M86 4753 aa2.14□□□□□ -2.07
SNHG1-201ENST00000535076 C9orf92A6NGG3 77 aa2.14□□□□□ -2.07
SNHG1-201ENST00000535076 KRTAP5-5Q701N2 237 aaPredicted RBP2.14□□□□□ -2.07
SNHG1-201ENST00000535076 CSMD3Q7Z407 3707 aa2.14□□□□□ -2.07
SNHG1-201ENST00000535076 PRKDCP78527 4128 aaKnown RBP2.12□□□□□ -2.07
SNHG1-201ENST00000535076 KRTAP5-2Q701N4 177 aa2.11□□□□□ -2.07
SNHG1-201ENST00000535076 MYCBP2O75592 4640 aa2.08□□□□□ -2.08
SNHG1-201ENST00000535076 KRTAP10-1P60331 282 aa2.06□□□□□ -2.08
SNHG1-201ENST00000535076 LYSTQ99698 3801 aa2.06□□□□□ -2.08
SNHG1-201ENST00000535076 DNAH9Q9NYC9 4486 aa2.06□□□□□ -2.08
SNHG1-201ENST00000535076 DNAH8Q96JB1 4490 aa2.05□□□□□ -2.08
SNHG1-201ENST00000535076 DNAH7Q8WXX0 4024 aa2.04□□□□□ -2.08
SNHG1-201ENST00000535076 HUWE1Q7Z6Z7 4374 aaKnown RBP2.02□□□□□ -2.09
SNHG1-201ENST00000535076 DYNC2H1Q8NCM8 4307 aaKnown RBP2.02□□□□□ -2.09
SNHG1-201ENST00000535076 DNAH6Q9C0G6 4158 aa2.02□□□□□ -2.09
SNHG1-201ENST00000535076 DNAH2Q9P225 4427 aa1.99□□□□□ -2.09
SNHG1-201ENST00000535076 DNAH10Q8IVF4 4471 aa1.98□□□□□ -2.09
SNHG1-201ENST00000535076 DNAH17Q9UFH2 4485 aa1.98□□□□□ -2.09
SNHG1-201ENST00000535076 KRTAP8-1Q8IUC2 63 aa1.97□□□□□ -2.09
SNHG1-201ENST00000535076 LCE3DQ9BYE3 92 aa1.96□□□□□ -2.1
SNHG1-201ENST00000535076 HECTD4Q9Y4D8 3996 aa1.96□□□□□ -2.1
SNHG1-201ENST00000535076 LCE1CQ5T751 118 aa1.95□□□□□ -2.1
SNHG1-201ENST00000535076 LCE1BQ5T7P3 118 aa1.95□□□□□ -2.1
SNHG1-201ENST00000535076 KRTAP2-3P0C7H8 128 aa1.94□□□□□ -2.1
SNHG1-201ENST00000535076 KRTAP2-4Q9BYR9 128 aa1.94□□□□□ -2.1
SNHG1-201ENST00000535076 KRTAP2-1Q9BYU5 128 aa1.94□□□□□ -2.1
SNHG1-201ENST00000535076 KMT2CQ8NEZ4 4911 aaKnown RBP1.93□□□□□ -2.1
SNHG1-201ENST00000535076 SACSQ9NZJ4 4579 aa1.93□□□□□ -2.1
SNHG1-201ENST00000535076 KMT2AQ03164 3969 aa1.93□□□□□ -2.1
SNHG1-201ENST00000535076 PLECQ15149 4684 aaKnown RBP1.92□□□□□ -2.1
SNHG1-201ENST00000535076 STARD9Q9P2P6 4700 aa1.92□□□□□ -2.1
SNHG1-201ENST00000535076 VPS13BQ7Z7G8 4022 aa1.9□□□□□ -2.1
SNHG1-201ENST00000535076 KRTAP6-3Q3LI67 103 aa1.9□□□□□ -2.11
SNHG1-201ENST00000535076 PKD1P98161 4303 aa1.89□□□□□ -2.11
SNHG1-201ENST00000535076 FAT2Q9NYQ8 4349 aa1.87□□□□□ -2.11
SNHG1-201ENST00000535076 RYR3Q15413 4870 aa1.87□□□□□ -2.11
SNHG1-201ENST00000535076 FLGP20930 4061 aaPredicted RBP1.86□□□□□ -2.11
SNHG1-201ENST00000535076 APOBP04114 4563 aaKnown RBP1.86□□□□□ -2.11
SNHG1-201ENST00000535076 M0R2T5 61 aa1.86□□□□□ -2.11
SNHG1-201ENST00000535076 KRTAP12-4P60329 112 aa1.86□□□□□ -2.11
SNHG1-201ENST00000535076 PKHD1P08F94 4074 aa1.86□□□□□ -2.11
SNHG1-201ENST00000535076 HYDINQ4G0P3 5121 aa1.85□□□□□ -2.11
SNHG1-201ENST00000535076 PKHD1L1Q86WI1 4243 aa1.84□□□□□ -2.11
SNHG1-201ENST00000535076 RYR2Q92736 4967 aa1.84□□□□□ -2.11
SNHG1-201ENST00000535076 KRTAP5-8O75690 187 aa1.84□□□□□ -2.11
SNHG1-201ENST00000535076 HSPG2P98160 4391 aa1.82□□□□□ -2.12
SNHG1-201ENST00000535076 KRTAP10-4P60372 401 aaPredicted RBP1.82□□□□□ -2.12
SNHG1-201ENST00000535076 EPPK1P58107 5090 aaKnown RBP1.81□□□□□ -2.12
SNHG1-201ENST00000535076 KRTAP12-3P60328 96 aa1.8□□□□□ -2.12
SNHG1-201ENST00000535076 LRP1Q07954 4544 aaKnown RBP1.8□□□□□ -2.12
Retrieved 100 of 20,778 RNA–protein pairs in 68.4 ms