RNA–Protein interactions for RNA: ENST00000534754.5

SORL1-213, Transcript of sortilin related receptor 1, humanhuman

TSL 3

Gene SORL1, Length 2,222 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SORL1-213ENST00000534754 FAT3Q8TDW7 4589 aa4.93□□□□□ -1.62
SORL1-213ENST00000534754 KRTAP1-4P0C5Y4 121 aa4.92□□□□□ -1.62
SORL1-213ENST00000534754 H3BS24 57 aa4.89□□□□□ -1.63
SORL1-213ENST00000534754 A8MUU9 505 aa4.89□□□□□ -1.63
SORL1-213ENST00000534754 H0YAA0 97 aa4.88□□□□□ -1.63
SORL1-213ENST00000534754 DMBT1Q9UGM3 2413 aaPredicted RBP4.88□□□□□ -1.63
SORL1-213ENST00000534754 MT1HL1P0DM35 61 aa4.87□□□□□ -1.63
SORL1-213ENST00000534754 TNXBP22105 4242 aa4.86□□□□□ -1.63
SORL1-213ENST00000534754 TYMSOSQ8TAI1 123 aa4.85□□□□□ -1.63
SORL1-213ENST00000534754 KRTAP25-1Q3LHN0 102 aa4.85□□□□□ -1.63
SORL1-213ENST00000534754 A0A1B0GU33 70 aa4.84□□□□□ -1.63
SORL1-213ENST00000534754 LINC00304Q8N9R0 145 aa4.84□□□□□ -1.63
SORL1-213ENST00000534754 KRTAP10-8P60410 259 aa4.82□□□□□ -1.64
SORL1-213ENST00000534754 H1FX-AS1Q4G0G2 97 aa4.82□□□□□ -1.64
SORL1-213ENST00000534754 RPS29P62273 56 aaKnown RBP4.79□□□□□ -1.64
SORL1-213ENST00000534754 J3QL48 77 aa4.78□□□□□ -1.64
SORL1-213ENST00000534754 LOC100996750A0A140TA64 210 aa4.77□□□□□ -1.65
SORL1-213ENST00000534754 K7ERS5 55 aa4.77□□□□□ -1.65
SORL1-213ENST00000534754 ROMO1P60602 79 aa4.77□□□□□ -1.65
SORL1-213ENST00000534754 KRTAP4-6Q9BYQ5 205 aa4.77□□□□□ -1.65
SORL1-213ENST00000534754 KRTAP3-1Q9BYR8 98 aa4.77□□□□□ -1.65
SORL1-213ENST00000534754 HERC1Q15751 4861 aa4.77□□□□□ -1.65
SORL1-213ENST00000534754 C20orf166-AS1Q96NR2 134 aa4.76□□□□□ -1.65
SORL1-213ENST00000534754 C9orf92A6NGG3 77 aa4.73□□□□□ -1.65
SORL1-213ENST00000534754 COX6B2Q6YFQ2 88 aa4.71□□□□□ -1.66
SORL1-213ENST00000534754 CRIPTQ9P021 101 aa4.69□□□□□ -1.66
SORL1-213ENST00000534754 RPL37P61927 97 aaKnown RBP4.64□□□□□ -1.67
SORL1-213ENST00000534754 HMCN2Q8NDA2 5059 aa4.63□□□□□ -1.67
SORL1-213ENST00000534754 LPAP08519 4548 aa4.62□□□□□ -1.67
SORL1-213ENST00000534754 P0C880 135 aa4.61□□□□□ -1.67
SORL1-213ENST00000534754 KRTAP10-6P60371 365 aaPredicted RBP4.6□□□□□ -1.67
SORL1-213ENST00000534754 LRP2P98164 4655 aa4.59□□□□□ -1.67
SORL1-213ENST00000534754 A0A0D9SG42 100 aa4.57□□□□□ -1.68
SORL1-213ENST00000534754 KRTAP13-4Q3LI77 160 aa4.57□□□□□ -1.68
SORL1-213ENST00000534754 XP32Q5T750 250 aa4.57□□□□□ -1.68
SORL1-213ENST00000534754 SPINT4Q6UDR6 99 aa4.56□□□□□ -1.68
SORL1-213ENST00000534754 TPRXLQ17RH7 258 aa4.56□□□□□ -1.68
SORL1-213ENST00000534754 LCE2BO14633 110 aa4.52□□□□□ -1.69
SORL1-213ENST00000534754 S4R3F8 94 aa4.51□□□□□ -1.69
SORL1-213ENST00000534754 C10orf95Q9H7T3 257 aa4.49□□□□□ -1.69
SORL1-213ENST00000534754 UBR4Q5T4S7 5183 aa4.47□□□□□ -1.69
SORL1-213ENST00000534754 KRTAP15-1Q3LI76 137 aa4.46□□□□□ -1.69
SORL1-213ENST00000534754 KRTAP12-2P59991 146 aa4.45□□□□□ -1.7
SORL1-213ENST00000534754 NDUFAF8A1L188 74 aa4.42□□□□□ -1.7
SORL1-213ENST00000534754 KRTAP12-1P59990 96 aa4.41□□□□□ -1.7
SORL1-213ENST00000534754 MUC17Q685J3 4493 aa4.4□□□□□ -1.71
SORL1-213ENST00000534754 RNF213Q63HN8 5207 aa4.37□□□□□ -1.71
SORL1-213ENST00000534754 KRTAP4-1Q9BYQ7 146 aa4.37□□□□□ -1.71
SORL1-213ENST00000534754 MUC2Q02817 5179 aa4.36□□□□□ -1.71
SORL1-213ENST00000534754 M0QZ58 72 aa4.36□□□□□ -1.71
SORL1-213ENST00000534754 LCE2AQ5TA79 106 aaPredicted RBP4.36□□□□□ -1.71
SORL1-213ENST00000534754 SEC61BP60468 96 aaKnown RBP4.34□□□□□ -1.71
SORL1-213ENST00000534754 KRTAP19-2Q3LHN2 52 aa4.23□□□□□ -1.73
SORL1-213ENST00000534754 FAT4Q6V0I7 4981 aa4.22□□□□□ -1.73
SORL1-213ENST00000534754 LCE2CQ5TA81 110 aa4.2□□□□□ -1.74
SORL1-213ENST00000534754 R4GN34 69 aa4.2□□□□□ -1.74
SORL1-213ENST00000534754 A0A0A0MQY5 61 aa4.19□□□□□ -1.74
SORL1-213ENST00000534754 PLAC4Q8WY50 150 aa4.18□□□□□ -1.74
SORL1-213ENST00000534754 KRTAP4-8Q9BYQ9 185 aa4.14□□□□□ -1.75
SORL1-213ENST00000534754 FLGP20930 4061 aaPredicted RBP4.12□□□□□ -1.75
SORL1-213ENST00000534754 MT1HP80294 61 aa4.11□□□□□ -1.75
SORL1-213ENST00000534754 KRTAP9-1A8MXZ3 250 aaPredicted RBP4.09□□□□□ -1.76
SORL1-213ENST00000534754 PP632Q6XCG6 107 aa4.09□□□□□ -1.76
SORL1-213ENST00000534754 LORP23490 312 aaPredicted RBP4.07□□□□□ -1.76
SORL1-213ENST00000534754 LUZP6Q538Z0 58 aa4.07□□□□□ -1.76
SORL1-213ENST00000534754 KRTAP9-2Q9BYQ4 174 aa4.05□□□□□ -1.76
SORL1-213ENST00000534754 KRTAP9-6A0A140TA67 174 aa4.05□□□□□ -1.76
SORL1-213ENST00000534754 CAMK2N1Q7Z7J9 78 aa4.02□□□□□ -1.77
SORL1-213ENST00000534754 M0R2T5 61 aa3.99□□□□□ -1.77
SORL1-213ENST00000534754 KRTAP9-8Q9BYQ0 159 aa3.93□□□□□ -1.78
SORL1-213ENST00000534754 KRTAP4-8A0A0G2JLE6 195 aa3.93□□□□□ -1.78
SORL1-213ENST00000534754 KRTAP23-1A1A580 65 aa3.9□□□□□ -1.79
SORL1-213ENST00000534754 MT2AP02795 61 aa3.9□□□□□ -1.79
SORL1-213ENST00000534754 TNP1P09430 55 aa3.9□□□□□ -1.79
SORL1-213ENST00000534754 LCE3BQ5TA77 95 aa3.9□□□□□ -1.79
SORL1-213ENST00000534754 MT1FP04733 61 aa3.88□□□□□ -1.79
SORL1-213ENST00000534754 SPRR5A0A1B0GTR4 108 aa3.86□□□□□ -1.79
SORL1-213ENST00000534754 KRTAP9-9Q9BYP9 154 aa3.85□□□□□ -1.79
SORL1-213ENST00000534754 KRTAP9-4Q9BYQ2 154 aa3.85□□□□□ -1.79
SORL1-213ENST00000534754 KRTAP4-7Q9BYR0 210 aa3.83□□□□□ -1.8
SORL1-213ENST00000534754 KRTAP10-10P60014 251 aa3.81□□□□□ -1.8
SORL1-213ENST00000534754 KRTAP9-3Q9BYQ3 159 aa3.79□□□□□ -1.8
SORL1-213ENST00000534754 FSIP2Q5CZC0 6907 aa3.76□□□□□ -1.81
SORL1-213ENST00000534754 KRTAP5-3Q6L8H2 238 aa3.76□□□□□ -1.81
SORL1-213ENST00000534754 KRTAP19-1Q8IUB9 90 aa3.72□□□□□ -1.81
SORL1-213ENST00000534754 KRTAP4-12Q9BQ66 201 aa3.69□□□□□ -1.82
SORL1-213ENST00000534754 USH2AO75445 5202 aa3.68□□□□□ -1.82
SORL1-213ENST00000534754 SPRR2GQ9BYE4 73 aa3.67□□□□□ -1.82
SORL1-213ENST00000534754 KRTAP4-2Q9BYR5 136 aa3.67□□□□□ -1.82
SORL1-213ENST00000534754 LCE3AQ5TA76 89 aa3.64□□□□□ -1.83
SORL1-213ENST00000534754 LCE1DQ5T752 114 aa3.63□□□□□ -1.83
SORL1-213ENST00000534754 PRO2289Q9P1D8 64 aa3.63□□□□□ -1.83
SORL1-213ENST00000534754 SSPOA2VEC9 5147 aa3.63□□□□□ -1.83
SORL1-213ENST00000534754 MT1BP07438 61 aa3.62□□□□□ -1.83
SORL1-213ENST00000534754 KRTAP19-8Q3LI54 63 aa3.62□□□□□ -1.83
SORL1-213ENST00000534754 CRCT1Q9UGL9 99 aa3.62□□□□□ -1.83
SORL1-213ENST00000534754 KRTAP4-9Q9BYQ8 210 aa3.61□□□□□ -1.83
SORL1-213ENST00000534754 INE1O15225 51 aa3.59□□□□□ -1.84
SORL1-213ENST00000534754 KRTAP8-1Q8IUC2 63 aa3.56□□□□□ -1.84
SORL1-213ENST00000534754 KRTAP19-6Q3LI70 58 aa3.54□□□□□ -1.84
Retrieved 100 of 20,778 RNA–protein pairs in 59.4 ms