RNA–Protein interactions for RNA: ENST00000534060.5

ARHGAP42-208, Transcript of Rho GTPase activating protein 42, human

TSL 3

Gene ARHGAP42, Length 501 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
ARHGAP42-208	ENST00000534060	DMXL2	Q8TDJ6	3036 aa		0.46	□□□□□ -2.34
ARHGAP42-208	ENST00000534060	CEP350	Q5VT06	3117 aa		0.46	□□□□□ -2.34
ARHGAP42-208	ENST00000534060	ZFHX4	Q86UP3	3567 aa		0.46	□□□□□ -2.34
ARHGAP42-208	ENST00000534060	ITPR1	Q14643	2758 aa		0.45	□□□□□ -2.34
ARHGAP42-208	ENST00000534060	WDR87	Q6ZQQ6	2873 aa		0.45	□□□□□ -2.34
ARHGAP42-208	ENST00000534060	SON	P18583	2426 aa	Known RBP	0.45	□□□□□ -2.34
ARHGAP42-208	ENST00000534060	LRP1	Q07954	4544 aa	Known RBP	0.45	□□□□□ -2.34
ARHGAP42-208	ENST00000534060	SPRR2D	P22532	72 aa		0.45	□□□□□ -2.34
ARHGAP42-208	ENST00000534060	KRTAP21-1	Q3LI58	79 aa		0.45	□□□□□ -2.34
ARHGAP42-208	ENST00000534060	GCN1	Q92616	2671 aa	Known RBP	0.45	□□□□□ -2.34
ARHGAP42-208	ENST00000534060	DNAH12	Q6ZR08	3092 aa		0.45	□□□□□ -2.34
ARHGAP42-208	ENST00000534060	HECTD4	Q9Y4D8	3996 aa		0.45	□□□□□ -2.34
ARHGAP42-208	ENST00000534060	ANKHD1	Q8IWZ3	2542 aa	Known RBP	0.44	□□□□□ -2.34
ARHGAP42-208	ENST00000534060	LAMA5	O15230	3695 aa		0.44	□□□□□ -2.34
ARHGAP42-208	ENST00000534060	SPG11	Q96JI7	2443 aa		0.44	□□□□□ -2.34
ARHGAP42-208	ENST00000534060	FLG	P20930	4061 aa	Predicted RBP	0.44	□□□□□ -2.34
ARHGAP42-208	ENST00000534060	CELSR3	Q9NYQ7	3312 aa		0.44	□□□□□ -2.34
ARHGAP42-208	ENST00000534060	HTT	P42858	3142 aa		0.44	□□□□□ -2.34
ARHGAP42-208	ENST00000534060	SPRR2A	P35326	72 aa		0.44	□□□□□ -2.34
ARHGAP42-208	ENST00000534060	DNAH6	Q9C0G6	4158 aa		0.44	□□□□□ -2.34
ARHGAP42-208	ENST00000534060	ZZEF1	O43149	2961 aa		0.44	□□□□□ -2.34
ARHGAP42-208	ENST00000534060	RELN	P78509	3460 aa		0.44	□□□□□ -2.34
ARHGAP42-208	ENST00000534060	MKI67	P46013	3256 aa	Known RBP	0.44	□□□□□ -2.34
ARHGAP42-208	ENST00000534060	DNAH9	Q9NYC9	4486 aa		0.44	□□□□□ -2.34
ARHGAP42-208	ENST00000534060	NBEA	Q8NFP9	2946 aa		0.44	□□□□□ -2.34
ARHGAP42-208	ENST00000534060	PRUNE2	Q8WUY3	3088 aa		0.44	□□□□□ -2.34
ARHGAP42-208	ENST00000534060	SETX	Q7Z333	2677 aa	Known RBP	0.43	□□□□□ -2.34
ARHGAP42-208	ENST00000534060	C5orf42	Q9H799	3197 aa		0.43	□□□□□ -2.34
ARHGAP42-208	ENST00000534060	NIPBL	Q6KC79	2804 aa	eCLIP	0.43	□□□□□ -2.34
ARHGAP42-208	ENST00000534060	ACACB	O00763	2458 aa		0.43	□□□□□ -2.34
ARHGAP42-208	ENST00000534060	TEX15	Q9BXT5	2789 aa		0.43	□□□□□ -2.34
ARHGAP42-208	ENST00000534060	CMYA5	Q8N3K9	4069 aa		0.43	□□□□□ -2.34
ARHGAP42-208	ENST00000534060	HIVEP1	P15822	2718 aa		0.43	□□□□□ -2.34
ARHGAP42-208	ENST00000534060	LRBA	P50851	2863 aa		0.43	□□□□□ -2.34
ARHGAP42-208	ENST00000534060	PKD1L1	Q8TDX9	2849 aa		0.43	□□□□□ -2.34
ARHGAP42-208	ENST00000534060	FLNB	O75369	2602 aa	Known RBP	0.43	□□□□□ -2.34
ARHGAP42-208	ENST00000534060	NBEAL2	Q6ZNJ1	2754 aa		0.43	□□□□□ -2.34
ARHGAP42-208	ENST00000534060	DMXL1	Q9Y485	3027 aa		0.43	□□□□□ -2.34
ARHGAP42-208	ENST00000534060	ZAN	Q9Y493	2812 aa		0.42	□□□□□ -2.34
ARHGAP42-208	ENST00000534060	LPA	P08519	4548 aa		0.42	□□□□□ -2.34
ARHGAP42-208	ENST00000534060	SZT2	Q5T011	3432 aa		0.42	□□□□□ -2.34
ARHGAP42-208	ENST00000534060	CD52	P31358	61 aa		0.42	□□□□□ -2.34
ARHGAP42-208	ENST00000534060	PKHD1	P08F94	4074 aa		0.42	□□□□□ -2.34
ARHGAP42-208	ENST00000534060	ZFYVE26	Q68DK2	2539 aa		0.42	□□□□□ -2.34
ARHGAP42-208	ENST00000534060	APOB	P04114	4563 aa	Known RBP	0.42	□□□□□ -2.34
ARHGAP42-208	ENST00000534060	MAP1A	P78559	2803 aa	Predicted RBP	0.42	□□□□□ -2.34
ARHGAP42-208	ENST00000534060	CUBN	O60494	3623 aa		0.42	□□□□□ -2.34
ARHGAP42-208	ENST00000534060	BOD1L1	Q8NFC6	3051 aa		0.41	□□□□□ -2.34
ARHGAP42-208	ENST00000534060	ANKRD11	Q6UB99	2663 aa	Predicted RBP	0.41	□□□□□ -2.34
ARHGAP42-208	ENST00000534060	UNC79	Q9P2D8	2635 aa		0.41	□□□□□ -2.34
ARHGAP42-208	ENST00000534060	PLEC	Q15149	4684 aa	Known RBP	0.41	□□□□□ -2.34
ARHGAP42-208	ENST00000534060	SPTBN5	Q9NRC6	3674 aa	Known RBP	0.41	□□□□□ -2.34
ARHGAP42-208	ENST00000534060	CSMD1	Q96PZ7	3565 aa		0.4	□□□□□ -2.34
ARHGAP42-208	ENST00000534060	SPEN	Q96T58	3664 aa	Known RBP	0.4	□□□□□ -2.35
ARHGAP42-208	ENST00000534060	CFAP46	Q8IYW2	2715 aa		0.4	□□□□□ -2.35
ARHGAP42-208	ENST00000534060	DNAH17	Q9UFH2	4485 aa		0.4	□□□□□ -2.35
ARHGAP42-208	ENST00000534060	USP9X	Q93008	2570 aa	Predicted RBP	0.4	□□□□□ -2.35
ARHGAP42-208	ENST00000534060	KRTAP6-2	Q3LI66	62 aa		0.4	□□□□□ -2.35
ARHGAP42-208	ENST00000534060	SPRR2F	Q96RM1	72 aa		0.4	□□□□□ -2.35
ARHGAP42-208	ENST00000534060	ITPR2	Q14571	2701 aa		0.4	□□□□□ -2.35
ARHGAP42-208	ENST00000534060	FREM2	Q5SZK8	3169 aa		0.4	□□□□□ -2.35
ARHGAP42-208	ENST00000534060	MYO18B	Q8IUG5	2567 aa		0.4	□□□□□ -2.35
ARHGAP42-208	ENST00000534060	TG	P01266	2768 aa		0.4	□□□□□ -2.35
ARHGAP42-208	ENST00000534060	LAMA3	Q16787	3333 aa		0.39	□□□□□ -2.35
ARHGAP42-208	ENST00000534060	TLN2	Q9Y4G6	2542 aa		0.39	□□□□□ -2.35
ARHGAP42-208	ENST00000534060	SVEP1	Q4LDE5	3571 aa		0.39	□□□□□ -2.35
ARHGAP42-208	ENST00000534060	DOPEY1	Q5JWR5	2465 aa		0.39	□□□□□ -2.35
ARHGAP42-208	ENST00000534060	SYNE1	Q8NF91	8797 aa	Known RBP	0.39	□□□□□ -2.35
ARHGAP42-208	ENST00000534060	FLNA	P21333	2647 aa	Known RBP	0.38	□□□□□ -2.35
ARHGAP42-208	ENST00000534060	TEP1	Q99973	2627 aa	Known RBP	0.38	□□□□□ -2.35
ARHGAP42-208	ENST00000534060	LRP1B	Q9NZR2	4599 aa		0.38	□□□□□ -2.35
ARHGAP42-208	ENST00000534060	MUC17	Q685J3	4493 aa		0.38	□□□□□ -2.35
ARHGAP42-208	ENST00000534060	DNAH5	Q8TE73	4624 aa		0.38	□□□□□ -2.35
ARHGAP42-208	ENST00000534060	MT1E	P04732	61 aa		0.38	□□□□□ -2.35
ARHGAP42-208	ENST00000534060	SPRR2E	P22531	72 aa		0.38	□□□□□ -2.35
ARHGAP42-208	ENST00000534060	FAT1	Q14517	4588 aa		0.38	□□□□□ -2.35
ARHGAP42-208	ENST00000534060	HRNR	Q86YZ3	2850 aa	Predicted RBP	0.38	□□□□□ -2.35
ARHGAP42-208	ENST00000534060	FASN	P49327	2511 aa	Known RBP	0.37	□□□□□ -2.35
ARHGAP42-208	ENST00000534060	KALRN	O60229	2985 aa		0.37	□□□□□ -2.35
ARHGAP42-208	ENST00000534060	NBEAL1	Q6ZS30	2694 aa		0.37	□□□□□ -2.35
ARHGAP42-208	ENST00000534060	SMG1	Q96Q15	3661 aa	Known RBP	0.37	□□□□□ -2.35
ARHGAP42-208	ENST00000534060	MXRA5	Q9NR99	2828 aa		0.37	□□□□□ -2.35
ARHGAP42-208	ENST00000534060	DCHS1	Q96JQ0	3298 aa		0.37	□□□□□ -2.35
ARHGAP42-208	ENST00000534060	WDFY4	Q6ZS81	3184 aa		0.37	□□□□□ -2.35
ARHGAP42-208	ENST00000534060	MAST4	O15021	2626 aa		0.36	□□□□□ -2.35
ARHGAP42-208	ENST00000534060	CFAP47	Q6ZTR5	3102 aa		0.36	□□□□□ -2.35
ARHGAP42-208	ENST00000534060	MDN1	Q9NU22	5596 aa		0.36	□□□□□ -2.35
ARHGAP42-208	ENST00000534060	DMD	P11532	3685 aa		0.36	□□□□□ -2.35
ARHGAP42-208	ENST00000534060	ADGRG4	Q8IZF6	3080 aa		0.36	□□□□□ -2.35
ARHGAP42-208	ENST00000534060	CENPE	Q02224	2701 aa		0.36	□□□□□ -2.35
ARHGAP42-208	ENST00000534060	VPS13A	Q96RL7	3174 aa		0.36	□□□□□ -2.35
ARHGAP42-208	ENST00000534060	MUC3A	Q02505	3323 aa		0.36	□□□□□ -2.35
ARHGAP42-208	ENST00000534060	DYNC1H1	Q14204	4646 aa	Known RBP	0.35	□□□□□ -2.35
ARHGAP42-208	ENST00000534060	TRRAP	Q9Y4A5	3859 aa		0.35	□□□□□ -2.35
ARHGAP42-208	ENST00000534060	SRCAP	Q6ZRS2	3230 aa		0.35	□□□□□ -2.35
ARHGAP42-208	ENST00000534060	HTN3	P15516	51 aa		0.35	□□□□□ -2.35
ARHGAP42-208	ENST00000534060	MT1H	P80294	61 aa		0.35	□□□□□ -2.35
ARHGAP42-208	ENST00000534060	MT1L	Q93083	61 aa		0.35	□□□□□ -2.35
ARHGAP42-208	ENST00000534060	MGAM2	Q2M2H8	2515 aa		0.35	□□□□□ -2.35
ARHGAP42-208	ENST00000534060	STAB2	Q8WWQ8	2551 aa		0.35	□□□□□ -2.35

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