RNA–Protein interactions for RNA: ENST00000533724.5

CHORDC1-209, Transcript of cysteine and histidine rich domain containing 1, humanhuman

TSL 2

Gene CHORDC1, Length 5,361 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHORDC1-209ENST00000533724 PKHD1L1Q86WI1 4243 aa3.67□□□□□ -1.82
CHORDC1-209ENST00000533724 KMT2AQ03164 3969 aa3.67□□□□□ -1.82
CHORDC1-209ENST00000533724 APOBP04114 4563 aaKnown RBP3.64□□□□□ -1.83
CHORDC1-209ENST00000533724 FRAS1Q86XX4 4008 aa3.64□□□□□ -1.83
CHORDC1-209ENST00000533724 CSMD3Q7Z407 3707 aa3.62□□□□□ -1.83
CHORDC1-209ENST00000533724 RYR1P21817 5038 aa3.61□□□□□ -1.83
CHORDC1-209ENST00000533724 VPS13BQ7Z7G8 4022 aa3.61□□□□□ -1.83
CHORDC1-209ENST00000533724 PKD1P98161 4303 aa3.6□□□□□ -1.83
CHORDC1-209ENST00000533724 LYSTQ99698 3801 aa3.58□□□□□ -1.84
CHORDC1-209ENST00000533724 A6NN06 94 aa3.58□□□□□ -1.84
CHORDC1-209ENST00000533724 KRTAP10-10P60014 251 aa3.56□□□□□ -1.84
CHORDC1-209ENST00000533724 A8MU10 97 aa3.55□□□□□ -1.84
CHORDC1-209ENST00000533724 BIRC6Q9NR09 4857 aa3.55□□□□□ -1.84
CHORDC1-209ENST00000533724 HYDINQ4G0P3 5121 aa3.55□□□□□ -1.84
CHORDC1-209ENST00000533724 FAT1Q14517 4588 aa3.54□□□□□ -1.84
CHORDC1-209ENST00000533724 P0C880 135 aa3.54□□□□□ -1.84
CHORDC1-209ENST00000533724 KRTAP3-3Q9BYR6 98 aa3.52□□□□□ -1.85
CHORDC1-209ENST00000533724 PRO2289Q9P1D8 64 aa3.52□□□□□ -1.85
CHORDC1-209ENST00000533724 PKHD1P08F94 4074 aa3.52□□□□□ -1.85
CHORDC1-209ENST00000533724 PP632Q6XCG6 107 aa3.52□□□□□ -1.85
CHORDC1-209ENST00000533724 HSPG2P98160 4391 aa3.51□□□□□ -1.85
CHORDC1-209ENST00000533724 TNP1P09430 55 aa3.51□□□□□ -1.85
CHORDC1-209ENST00000533724 KRTAP17-1Q9BYP8 105 aa3.51□□□□□ -1.85
CHORDC1-209ENST00000533724 KRTAP25-1Q3LHN0 102 aa3.5□□□□□ -1.85
CHORDC1-209ENST00000533724 KRTAP10-6P60371 365 aaPredicted RBP3.5□□□□□ -1.85
CHORDC1-209ENST00000533724 RYR3Q15413 4870 aa3.47□□□□□ -1.85
CHORDC1-209ENST00000533724 SRRM2Q9UQ35 2752 aaKnown RBP3.46□□□□□ -1.86
CHORDC1-209ENST00000533724 KRTAP3-2Q9BYR7 98 aa3.45□□□□□ -1.86
CHORDC1-209ENST00000533724 FAT3Q8TDW7 4589 aa3.45□□□□□ -1.86
CHORDC1-209ENST00000533724 HERC1Q15751 4861 aa3.42□□□□□ -1.86
CHORDC1-209ENST00000533724 KRTAP12-1P59990 96 aa3.41□□□□□ -1.86
CHORDC1-209ENST00000533724 KRTAP4-1Q9BYQ7 146 aa3.41□□□□□ -1.86
CHORDC1-209ENST00000533724 PRAC1Q96KF2 57 aa3.39□□□□□ -1.87
CHORDC1-209ENST00000533724 MYCBP2O75592 4640 aa3.39□□□□□ -1.87
CHORDC1-209ENST00000533724 KIAA1109Q2LD37 5005 aa3.39□□□□□ -1.87
CHORDC1-209ENST00000533724 HERC2O95714 4834 aa3.39□□□□□ -1.87
CHORDC1-209ENST00000533724 TNXBP22105 4242 aa3.39□□□□□ -1.87
CHORDC1-209ENST00000533724 MUC17Q685J3 4493 aa3.38□□□□□ -1.87
CHORDC1-209ENST00000533724 KRTAP13-4Q3LI77 160 aa3.37□□□□□ -1.87
CHORDC1-209ENST00000533724 KRTAP12-2P59991 146 aa3.37□□□□□ -1.87
CHORDC1-209ENST00000533724 MT1HP80294 61 aa3.36□□□□□ -1.87
CHORDC1-209ENST00000533724 KMT2CQ8NEZ4 4911 aaKnown RBP3.35□□□□□ -1.87
CHORDC1-209ENST00000533724 LUZP6Q538Z0 58 aa3.34□□□□□ -1.87
CHORDC1-209ENST00000533724 KRTAP23-1A1A580 65 aa3.31□□□□□ -1.88
CHORDC1-209ENST00000533724 SPRR2GQ9BYE4 73 aa3.28□□□□□ -1.88
CHORDC1-209ENST00000533724 LRP1Q07954 4544 aaKnown RBP3.26□□□□□ -1.89
CHORDC1-209ENST00000533724 MT2AP02795 61 aa3.25□□□□□ -1.89
CHORDC1-209ENST00000533724 EPPK1P58107 5090 aaKnown RBP3.24□□□□□ -1.89
CHORDC1-209ENST00000533724 LCE2CQ5TA81 110 aa3.2□□□□□ -1.9
CHORDC1-209ENST00000533724 C10orf95Q9H7T3 257 aa3.2□□□□□ -1.9
CHORDC1-209ENST00000533724 KRTAP19-2Q3LHN2 52 aa3.19□□□□□ -1.9
CHORDC1-209ENST00000533724 LORP23490 312 aaPredicted RBP3.18□□□□□ -1.9
CHORDC1-209ENST00000533724 MT1FP04733 61 aa3.17□□□□□ -1.9
CHORDC1-209ENST00000533724 KRTAP19-8Q3LI54 63 aa3.17□□□□□ -1.9
CHORDC1-209ENST00000533724 ABCA13Q86UQ4 5058 aa3.16□□□□□ -1.9
CHORDC1-209ENST00000533724 PCLOQ9Y6V0 5065 aa3.16□□□□□ -1.9
CHORDC1-209ENST00000533724 KRTAP10-12P60413 245 aa3.13□□□□□ -1.91
CHORDC1-209ENST00000533724 KRTAP9-8Q9BYQ0 159 aa3.11□□□□□ -1.91
CHORDC1-209ENST00000533724 KRTAP19-4Q3LI73 84 aa3.07□□□□□ -1.92
CHORDC1-209ENST00000533724 KRTAP19-1Q8IUB9 90 aa3.07□□□□□ -1.92
CHORDC1-209ENST00000533724 FLGP20930 4061 aaPredicted RBP3.05□□□□□ -1.92
CHORDC1-209ENST00000533724 A0A0A0MQY5 61 aa3.04□□□□□ -1.92
CHORDC1-209ENST00000533724 KRTAP9-3Q9BYQ3 159 aa3.04□□□□□ -1.92
CHORDC1-209ENST00000533724 HMCN2Q8NDA2 5059 aa3.03□□□□□ -1.92
CHORDC1-209ENST00000533724 LRP2P98164 4655 aa3.02□□□□□ -1.93
CHORDC1-209ENST00000533724 LCE2AQ5TA79 106 aaPredicted RBP3.01□□□□□ -1.93
CHORDC1-209ENST00000533724 LPAP08519 4548 aa3□□□□□ -1.93
CHORDC1-209ENST00000533724 KRTAP10-5P60370 271 aa2.99□□□□□ -1.93
CHORDC1-209ENST00000533724 KRTAP12-3P60328 96 aa2.99□□□□□ -1.93
CHORDC1-209ENST00000533724 MT1BP07438 61 aa2.98□□□□□ -1.93
CHORDC1-209ENST00000533724 LCE2DQ5TA82 110 aaPredicted RBP2.98□□□□□ -1.93
CHORDC1-209ENST00000533724 KRTAP15-1Q3LI76 137 aa2.98□□□□□ -1.93
CHORDC1-209ENST00000533724 LCE3AQ5TA76 89 aa2.98□□□□□ -1.93
CHORDC1-209ENST00000533724 KRTAP8-1Q8IUC2 63 aa2.93□□□□□ -1.94
CHORDC1-209ENST00000533724 MT1XP80297 61 aa2.92□□□□□ -1.94
CHORDC1-209ENST00000533724 RNF213Q63HN8 5207 aa2.9□□□□□ -1.94
CHORDC1-209ENST00000533724 NDUFAF8A1L188 74 aa2.89□□□□□ -1.95
CHORDC1-209ENST00000533724 KRTAP19-6Q3LI70 58 aa2.87□□□□□ -1.95
CHORDC1-209ENST00000533724 LCE2BO14633 110 aa2.86□□□□□ -1.95
CHORDC1-209ENST00000533724 FAT4Q6V0I7 4981 aa2.83□□□□□ -1.96
CHORDC1-209ENST00000533724 KRTAP10-7P60409 375 aaPredicted RBP2.8□□□□□ -1.96
CHORDC1-209ENST00000533724 KRTAP19-5Q3LI72 72 aa2.79□□□□□ -1.96
CHORDC1-209ENST00000533724 CRCT1Q9UGL9 99 aa2.76□□□□□ -1.97
CHORDC1-209ENST00000533724 H3BS24 57 aa2.76□□□□□ -1.97
CHORDC1-209ENST00000533724 KRTAP9-2Q9BYQ4 174 aa2.74□□□□□ -1.97
CHORDC1-209ENST00000533724 LCE3CQ5T5A8 94 aa2.73□□□□□ -1.97
CHORDC1-209ENST00000533724 SPRR2FQ96RM1 72 aa2.72□□□□□ -1.97
CHORDC1-209ENST00000533724 MT1GP13640 62 aa2.68□□□□□ -1.98
CHORDC1-209ENST00000533724 UBR4Q5T4S7 5183 aa2.67□□□□□ -1.98
CHORDC1-209ENST00000533724 SPRR5A0A1B0GTR4 108 aa2.65□□□□□ -1.99
CHORDC1-209ENST00000533724 INE1O15225 51 aa2.64□□□□□ -1.99
CHORDC1-209ENST00000533724 MT1EP04732 61 aa2.63□□□□□ -1.99
CHORDC1-209ENST00000533724 SPRR2EP22531 72 aa2.62□□□□□ -1.99
CHORDC1-209ENST00000533724 SPRR2BP35325 72 aa2.62□□□□□ -1.99
CHORDC1-209ENST00000533724 SPRR2AP35326 72 aa2.62□□□□□ -1.99
CHORDC1-209ENST00000533724 KRTAP19-3Q7Z4W3 81 aa2.61□□□□□ -1.99
CHORDC1-209ENST00000533724 KRTAP9-6A0A140TA67 174 aa2.61□□□□□ -1.99
CHORDC1-209ENST00000533724 MT1LQ93083 61 aa2.59□□□□□ -1.99
CHORDC1-209ENST00000533724 KRTAP4-8A0A0G2JLE6 195 aa2.59□□□□□ -1.99
CHORDC1-209ENST00000533724 KRTAP4-8Q9BYQ9 185 aa2.59□□□□□ -1.99
Retrieved 100 of 20,778 RNA–protein pairs in 151.1 ms