RNA–Protein interactions for RNA: ENST00000533408.1

PTP4A2-215, Transcript of protein tyrosine phosphatase type IVA, member 2, humanhuman

TSL 3

Gene PTP4A2, Length 376 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTP4A2-215ENST00000533408 LORP23490 312 aaPredicted RBP10.16□□□□□ -0.78
PTP4A2-215ENST00000533408 CCDC179H3BU77 68 aa10.13□□□□□ -0.79
PTP4A2-215ENST00000533408 H7BZZ5 65 aa10.13□□□□□ -0.79
PTP4A2-215ENST00000533408 SPTSSBQ8NFR3 76 aa10.09□□□□□ -0.79
PTP4A2-215ENST00000533408 CHKB-CPT1BH3BT56 60 aa10.07□□□□□ -0.8
PTP4A2-215ENST00000533408 KRTAP3-3Q9BYR6 98 aa10.06□□□□□ -0.8
PTP4A2-215ENST00000533408 CYSTM1Q9H1C7 97 aa10.03□□□□□ -0.8
PTP4A2-215ENST00000533408 KRTAP9-8Q9BYQ0 159 aa10.02□□□□□ -0.81
PTP4A2-215ENST00000533408 ATP5EP56381 51 aaPredicted RBP10□□□□□ -0.81
PTP4A2-215ENST00000533408 KRTAP10-10P60014 251 aa9.95□□□□□ -0.82
PTP4A2-215ENST00000533408 MT2AP02795 61 aa9.94□□□□□ -0.82
PTP4A2-215ENST00000533408 H0YAA0 97 aa9.92□□□□□ -0.82
PTP4A2-215ENST00000533408 TMEM258P61165 79 aa9.92□□□□□ -0.82
PTP4A2-215ENST00000533408 COA5Q86WW8 74 aa9.9□□□□□ -0.82
PTP4A2-215ENST00000533408 MT1FP04733 61 aa9.84□□□□□ -0.83
PTP4A2-215ENST00000533408 LCE2DQ5TA82 110 aaPredicted RBP9.82□□□□□ -0.84
PTP4A2-215ENST00000533408 PCP4P48539 62 aa9.81□□□□□ -0.84
PTP4A2-215ENST00000533408 ADM2Q7Z4H4 148 aa9.77□□□□□ -0.85
PTP4A2-215ENST00000533408 CRIPTQ9P021 101 aa9.77□□□□□ -0.85
PTP4A2-215ENST00000533408 KRTAP9-3Q9BYQ3 159 aa9.69□□□□□ -0.86
PTP4A2-215ENST00000533408 SEC61GP60059 68 aa9.67□□□□□ -0.86
PTP4A2-215ENST00000533408 KRTAP9-2Q9BYQ4 174 aa9.66□□□□□ -0.86
PTP4A2-215ENST00000533408 SERP1Q9Y6X1 66 aa9.6□□□□□ -0.87
PTP4A2-215ENST00000533408 KRTAP3-2Q9BYR7 98 aa9.57□□□□□ -0.88
PTP4A2-215ENST00000533408 P0C880 135 aa9.55□□□□□ -0.88
PTP4A2-215ENST00000533408 SPRR2GQ9BYE4 73 aa9.55□□□□□ -0.88
PTP4A2-215ENST00000533408 R4GN34 69 aa9.54□□□□□ -0.88
PTP4A2-215ENST00000533408 KRTAP19-1Q8IUB9 90 aa9.48□□□□□ -0.89
PTP4A2-215ENST00000533408 A0A1B0GU69 56 aa9.46□□□□□ -0.9
PTP4A2-215ENST00000533408 M0QZ58 72 aa9.46□□□□□ -0.9
PTP4A2-215ENST00000533408 LCE2BO14633 110 aa9.46□□□□□ -0.9
PTP4A2-215ENST00000533408 PRR15LQ9BU68 103 aa9.45□□□□□ -0.9
PTP4A2-215ENST00000533408 Q5VV11 94 aa9.38□□□□□ -0.91
PTP4A2-215ENST00000533408 RPS28P62857 69 aaKnown RBP9.37□□□□□ -0.91
PTP4A2-215ENST00000533408 LINC01558Q9Y6Z2 57 aa9.37□□□□□ -0.91
PTP4A2-215ENST00000533408 KRTAP19-8Q3LI54 63 aa9.36□□□□□ -0.91
PTP4A2-215ENST00000533408 V9GYY9 64 aa9.36□□□□□ -0.91
PTP4A2-215ENST00000533408 A0A1B0GU33 70 aa9.33□□□□□ -0.92
PTP4A2-215ENST00000533408 SMIM26A0A096LP01 95 aa9.29□□□□□ -0.92
PTP4A2-215ENST00000533408 CRCT1Q9UGL9 99 aa9.28□□□□□ -0.92
PTP4A2-215ENST00000533408 LINC01554Q52M75 96 aa9.26□□□□□ -0.93
PTP4A2-215ENST00000533408 PLAC4Q8WY50 150 aa9.23□□□□□ -0.93
PTP4A2-215ENST00000533408 Q1T7F1 81 aa9.22□□□□□ -0.93
PTP4A2-215ENST00000533408 MT1BP07438 61 aa9.2□□□□□ -0.94
PTP4A2-215ENST00000533408 KRTAP9-6A0A140TA67 174 aa9.16□□□□□ -0.94
PTP4A2-215ENST00000533408 A6NN06 94 aa9.16□□□□□ -0.94
PTP4A2-215ENST00000533408 KRTAP13-4Q3LI77 160 aa9.13□□□□□ -0.95
PTP4A2-215ENST00000533408 USH2AO75445 5202 aa9.12□□□□□ -0.95
PTP4A2-215ENST00000533408 KRTAP19-6Q3LI70 58 aa9.12□□□□□ -0.95
PTP4A2-215ENST00000533408 UQCR11O14957 56 aa9.1□□□□□ -0.95
PTP4A2-215ENST00000533408 SPATA8Q6RVD6 105 aa9.09□□□□□ -0.95
PTP4A2-215ENST00000533408 FSIP2Q5CZC0 6907 aa9.07□□□□□ -0.96
PTP4A2-215ENST00000533408 PSPHP1O15172 72 aa9.03□□□□□ -0.96
PTP4A2-215ENST00000533408 A0A0D9SG42 100 aa9.01□□□□□ -0.97
PTP4A2-215ENST00000533408 PRO2289Q9P1D8 64 aa9.01□□□□□ -0.97
PTP4A2-215ENST00000533408 KRTAP10-5P60370 271 aa8.93□□□□□ -0.98
PTP4A2-215ENST00000533408 MIR22HGQ0VDD5 57 aa8.9□□□□□ -0.98
PTP4A2-215ENST00000533408 SPINT4Q6UDR6 99 aa8.89□□□□□ -0.99
PTP4A2-215ENST00000533408 CAMK2N1Q7Z7J9 78 aa8.89□□□□□ -0.99
PTP4A2-215ENST00000533408 SSPOA2VEC9 5147 aa8.87□□□□□ -0.99
PTP4A2-215ENST00000533408 A8MU10 97 aa8.85□□□□□ -0.99
PTP4A2-215ENST00000533408 A6NED7 52 aa8.84□□□□□ -0.99
PTP4A2-215ENST00000533408 KRTAP12-1P59990 96 aa8.83□□□□□ -1
PTP4A2-215ENST00000533408 MT1XP80297 61 aa8.79□□□□□ -1
PTP4A2-215ENST00000533408 K7ERS5 55 aa8.76□□□□□ -1.01
PTP4A2-215ENST00000533408 KRTAP12-2P59991 146 aa8.75□□□□□ -1.01
PTP4A2-215ENST00000533408 FCGBPQ9Y6R7 5405 aaPredicted RBP8.69□□□□□ -1.02
PTP4A2-215ENST00000533408 CDC42SE1Q9NRR8 79 aa8.58□□□□□ -1.04
PTP4A2-215ENST00000533408 KRTAP9-1A8MXZ3 250 aaPredicted RBP8.56□□□□□ -1.04
PTP4A2-215ENST00000533408 KRTAP10-12P60413 245 aa8.4□□□□□ -1.06
PTP4A2-215ENST00000533408 KRTAP10-7P60409 375 aaPredicted RBP8.38□□□□□ -1.07
PTP4A2-215ENST00000533408 TNP1P09430 55 aa8.37□□□□□ -1.07
PTP4A2-215ENST00000533408 C10orf95Q9H7T3 257 aa8.36□□□□□ -1.07
PTP4A2-215ENST00000533408 KRTAP9-7A8MTY7 169 aa8.3□□□□□ -1.08
PTP4A2-215ENST00000533408 BRK1Q8WUW1 75 aa8.29□□□□□ -1.08
PTP4A2-215ENST00000533408 KRTAP6-3Q3LI67 103 aa8.28□□□□□ -1.08
PTP4A2-215ENST00000533408 KRTAP8-1Q8IUC2 63 aa8.26□□□□□ -1.09
PTP4A2-215ENST00000533408 MACF1Q9UPN3 7388 aaKnown RBP8.25□□□□□ -1.09
PTP4A2-215ENST00000533408 KRTAP25-1Q3LHN0 102 aa8.22□□□□□ -1.09
PTP4A2-215ENST00000533408 KRTAP4-8A0A0G2JLE6 195 aa8.17□□□□□ -1.1
PTP4A2-215ENST00000533408 KRTAP4-8Q9BYQ9 185 aa8.17□□□□□ -1.1
PTP4A2-215ENST00000533408 ROMO1P60602 79 aa8.16□□□□□ -1.1
PTP4A2-215ENST00000533408 KRTAP5-9P26371 169 aa8.12□□□□□ -1.11
PTP4A2-215ENST00000533408 SYNE2Q8WXH0 6885 aaKnown RBP8.04□□□□□ -1.12
PTP4A2-215ENST00000533408 SPRR2FQ96RM1 72 aa8.04□□□□□ -1.12
PTP4A2-215ENST00000533408 KRTAP23-1A1A580 65 aa7.98□□□□□ -1.13
PTP4A2-215ENST00000533408 LCE3AQ5TA76 89 aa7.96□□□□□ -1.14
PTP4A2-215ENST00000533408 KMT2DO14686 5537 aa7.94□□□□□ -1.14
PTP4A2-215ENST00000533408 PMAIP1Q13794 54 aa7.88□□□□□ -1.15
PTP4A2-215ENST00000533408 PP632Q6XCG6 107 aa7.87□□□□□ -1.15
PTP4A2-215ENST00000533408 PRO0628Q9UI54 55 aa7.85□□□□□ -1.15
PTP4A2-215ENST00000533408 KRTAP19-5Q3LI72 72 aa7.83□□□□□ -1.16
PTP4A2-215ENST00000533408 KRTAP19-7Q3SYF9 63 aa7.83□□□□□ -1.16
PTP4A2-215ENST00000533408 SPRR2EP22531 72 aa7.78□□□□□ -1.16
PTP4A2-215ENST00000533408 SPRR2BP35325 72 aa7.78□□□□□ -1.16
PTP4A2-215ENST00000533408 SPRR2AP35326 72 aa7.78□□□□□ -1.16
PTP4A2-215ENST00000533408 MT1EP04732 61 aa7.76□□□□□ -1.17
PTP4A2-215ENST00000533408 KRTAP12-3P60328 96 aa7.74□□□□□ -1.17
PTP4A2-215ENST00000533408 LCE1AQ5T7P2 110 aa7.73□□□□□ -1.17
PTP4A2-215ENST00000533408 KRTAP19-3Q7Z4W3 81 aa7.62□□□□□ -1.19
Retrieved 100 of 20,778 RNA–protein pairs in 83.9 ms