RNA–Protein interactions for RNA: ENST00000533333.5

PAX6-228, Transcript of paired box 6, humanhuman

TSL 2

Gene PAX6, Length 6,173 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PAX6-228ENST00000533333 MEGF8Q7Z7M0 2845 aa7.22□□□□□ -1.25
PAX6-228ENST00000533333 TRRAPQ9Y4A5 3859 aa7.21□□□□□ -1.25
PAX6-228ENST00000533333 COL7A1Q02388 2944 aa7.21□□□□□ -1.26
PAX6-228ENST00000533333 ALMS1Q8TCU4 4167 aa7.2□□□□□ -1.26
PAX6-228ENST00000533333 KRTAP10-7P60409 375 aaPredicted RBP7.11□□□□□ -1.27
PAX6-228ENST00000533333 KRTAP10-4P60372 401 aaPredicted RBP7.09□□□□□ -1.28
PAX6-228ENST00000533333 ZNF469Q96JG9 3925 aaPredicted RBP7.08□□□□□ -1.28
PAX6-228ENST00000533333 DNAH9Q9NYC9 4486 aa7.04□□□□□ -1.28
PAX6-228ENST00000533333 SPRR2FQ96RM1 72 aa7.03□□□□□ -1.28
PAX6-228ENST00000533333 CSMD3Q7Z407 3707 aa6.92□□□□□ -1.3
PAX6-228ENST00000533333 DNAH10Q8IVF4 4471 aa6.88□□□□□ -1.31
PAX6-228ENST00000533333 MT1HP80294 61 aa6.86□□□□□ -1.31
PAX6-228ENST00000533333 VPS13DQ5THJ4 4388 aa6.85□□□□□ -1.31
PAX6-228ENST00000533333 DNAH1Q9P2D7 4330 aa6.85□□□□□ -1.31
PAX6-228ENST00000533333 DNAH3Q8TD57 4116 aa6.84□□□□□ -1.31
PAX6-228ENST00000533333 DNAH17Q9UFH2 4485 aa6.82□□□□□ -1.32
PAX6-228ENST00000533333 KRTAP19-5Q3LI72 72 aa6.81□□□□□ -1.32
PAX6-228ENST00000533333 PLECQ15149 4684 aaKnown RBP6.78□□□□□ -1.32
PAX6-228ENST00000533333 MT2AP02795 61 aa6.74□□□□□ -1.33
PAX6-228ENST00000533333 LCE3CQ5T5A8 94 aa6.72□□□□□ -1.33
PAX6-228ENST00000533333 DYNC2H1Q8NCM8 4307 aaKnown RBP6.7□□□□□ -1.34
PAX6-228ENST00000533333 KRTAP4-1Q9BYQ7 146 aa6.68□□□□□ -1.34
PAX6-228ENST00000533333 ANK2Q01484 3957 aa6.68□□□□□ -1.34
PAX6-228ENST00000533333 SPRR2EP22531 72 aa6.67□□□□□ -1.34
PAX6-228ENST00000533333 SPRR2BP35325 72 aa6.67□□□□□ -1.34
PAX6-228ENST00000533333 SPRR2AP35326 72 aa6.67□□□□□ -1.34
PAX6-228ENST00000533333 CMYA5Q8N3K9 4069 aa6.65□□□□□ -1.34
PAX6-228ENST00000533333 DNAH6Q9C0G6 4158 aa6.64□□□□□ -1.35
PAX6-228ENST00000533333 FRAS1Q86XX4 4008 aa6.64□□□□□ -1.35
PAX6-228ENST00000533333 SPRR2GQ9BYE4 73 aa6.63□□□□□ -1.35
PAX6-228ENST00000533333 DNAH8Q96JB1 4490 aa6.63□□□□□ -1.35
PAX6-228ENST00000533333 DNAH2Q9P225 4427 aa6.6□□□□□ -1.35
PAX6-228ENST00000533333 DNAH11Q96DT5 4516 aa6.57□□□□□ -1.36
PAX6-228ENST00000533333 MT1FP04733 61 aa6.56□□□□□ -1.36
PAX6-228ENST00000533333 STARD9Q9P2P6 4700 aa6.55□□□□□ -1.36
PAX6-228ENST00000533333 LCE3BQ5TA77 95 aa6.55□□□□□ -1.36
PAX6-228ENST00000533333 DNAH5Q8TE73 4624 aa6.54□□□□□ -1.36
PAX6-228ENST00000533333 SPRR2DP22532 72 aa6.46□□□□□ -1.38
PAX6-228ENST00000533333 KRTAP19-4Q3LI73 84 aa6.43□□□□□ -1.38
PAX6-228ENST00000533333 DYNC1H1Q14204 4646 aaKnown RBP6.42□□□□□ -1.38
PAX6-228ENST00000533333 SACSQ9NZJ4 4579 aa6.41□□□□□ -1.38
PAX6-228ENST00000533333 KRTAP12-4P60329 112 aa6.37□□□□□ -1.39
PAX6-228ENST00000533333 FAT2Q9NYQ8 4349 aa6.37□□□□□ -1.39
PAX6-228ENST00000533333 LYSTQ99698 3801 aa6.36□□□□□ -1.39
PAX6-228ENST00000533333 LRP1BQ9NZR2 4599 aa6.36□□□□□ -1.39
PAX6-228ENST00000533333 LCE2BO14633 110 aa6.35□□□□□ -1.39
PAX6-228ENST00000533333 DNAH7Q8WXX0 4024 aa6.35□□□□□ -1.39
PAX6-228ENST00000533333 PRKDCP78527 4128 aaKnown RBP6.34□□□□□ -1.39
PAX6-228ENST00000533333 MT1GP13640 62 aa6.31□□□□□ -1.4
PAX6-228ENST00000533333 HECTD4Q9Y4D8 3996 aa6.3□□□□□ -1.4
PAX6-228ENST00000533333 KMT2AQ03164 3969 aa6.28□□□□□ -1.4
PAX6-228ENST00000533333 FAT1Q14517 4588 aa6.21□□□□□ -1.41
PAX6-228ENST00000533333 VPS13BQ7Z7G8 4022 aa6.21□□□□□ -1.42
PAX6-228ENST00000533333 DNHD1Q96M86 4753 aa6.15□□□□□ -1.43
PAX6-228ENST00000533333 LCE3DQ9BYE3 92 aa6.13□□□□□ -1.43
PAX6-228ENST00000533333 APOBP04114 4563 aaKnown RBP6.04□□□□□ -1.44
PAX6-228ENST00000533333 LCE2CQ5TA81 110 aa6.02□□□□□ -1.45
PAX6-228ENST00000533333 KRTAP19-8Q3LI54 63 aa6.02□□□□□ -1.45
PAX6-228ENST00000533333 LCE3EQ5T5B0 92 aa6.01□□□□□ -1.45
PAX6-228ENST00000533333 MT1XP80297 61 aa5.96□□□□□ -1.46
PAX6-228ENST00000533333 LCE2DQ5TA82 110 aaPredicted RBP5.96□□□□□ -1.46
PAX6-228ENST00000533333 RYR1P21817 5038 aa5.94□□□□□ -1.46
PAX6-228ENST00000533333 FAT3Q8TDW7 4589 aa5.94□□□□□ -1.46
PAX6-228ENST00000533333 KRTAP19-1Q8IUB9 90 aa5.91□□□□□ -1.46
PAX6-228ENST00000533333 KRTAP4-8A0A0G2JLE6 195 aa5.9□□□□□ -1.46
PAX6-228ENST00000533333 KRTAP4-8Q9BYQ9 185 aa5.9□□□□□ -1.46
PAX6-228ENST00000533333 PKD1P98161 4303 aa5.9□□□□□ -1.46
PAX6-228ENST00000533333 RYR2Q92736 4967 aa5.89□□□□□ -1.47
PAX6-228ENST00000533333 PKHD1L1Q86WI1 4243 aa5.89□□□□□ -1.47
PAX6-228ENST00000533333 KRTAP17-1Q9BYP8 105 aa5.86□□□□□ -1.47
PAX6-228ENST00000533333 HYDINQ4G0P3 5121 aa5.84□□□□□ -1.48
PAX6-228ENST00000533333 LRP1Q07954 4544 aaKnown RBP5.8□□□□□ -1.48
PAX6-228ENST00000533333 MT1BP07438 61 aa5.8□□□□□ -1.48
PAX6-228ENST00000533333 MYCBP2O75592 4640 aa5.77□□□□□ -1.49
PAX6-228ENST00000533333 MT4P47944 62 aa5.76□□□□□ -1.49
PAX6-228ENST00000533333 RYR3Q15413 4870 aa5.76□□□□□ -1.49
PAX6-228ENST00000533333 HSPG2P98160 4391 aa5.75□□□□□ -1.49
PAX6-228ENST00000533333 PKHD1P08F94 4074 aa5.74□□□□□ -1.49
PAX6-228ENST00000533333 KRTAP19-3Q7Z4W3 81 aa5.71□□□□□ -1.5
PAX6-228ENST00000533333 SPRR5A0A1B0GTR4 108 aa5.7□□□□□ -1.5
PAX6-228ENST00000533333 LCE1BQ5T7P3 118 aa5.69□□□□□ -1.5
PAX6-228ENST00000533333 TNXBP22105 4242 aa5.67□□□□□ -1.5
PAX6-228ENST00000533333 KRTAP9-8Q9BYQ0 159 aa5.65□□□□□ -1.51
PAX6-228ENST00000533333 MT3P25713 68 aa5.63□□□□□ -1.51
PAX6-228ENST00000533333 LCE1DQ5T752 114 aa5.6□□□□□ -1.51
PAX6-228ENST00000533333 PRM1P04553 51 aa5.6□□□□□ -1.51
PAX6-228ENST00000533333 KIAA1109Q2LD37 5005 aa5.6□□□□□ -1.51
PAX6-228ENST00000533333 KRTAP4-7Q9BYR0 210 aa5.59□□□□□ -1.51
PAX6-228ENST00000533333 KRTAP9-3Q9BYQ3 159 aa5.58□□□□□ -1.52
PAX6-228ENST00000533333 MT1LQ93083 61 aa5.56□□□□□ -1.52
PAX6-228ENST00000533333 HERC1Q15751 4861 aa5.53□□□□□ -1.52
PAX6-228ENST00000533333 MT1EP04732 61 aa5.45□□□□□ -1.54
PAX6-228ENST00000533333 KRTAP19-2Q3LHN2 52 aa5.44□□□□□ -1.54
PAX6-228ENST00000533333 MUC17Q685J3 4493 aa5.44□□□□□ -1.54
PAX6-228ENST00000533333 LPAP08519 4548 aa5.39□□□□□ -1.55
PAX6-228ENST00000533333 BIRC6Q9NR09 4857 aa5.38□□□□□ -1.55
PAX6-228ENST00000533333 LCE5AQ5TCM9 118 aa5.37□□□□□ -1.55
PAX6-228ENST00000533333 MT1MQ8N339 61 aa5.37□□□□□ -1.55
PAX6-228ENST00000533333 LRP2P98164 4655 aa5.37□□□□□ -1.55
PAX6-228ENST00000533333 LOC100996750A0A140TA64 210 aa5.33□□□□□ -1.56
Retrieved 100 of 20,778 RNA–protein pairs in 92.3 ms