RNA–Protein interactions for RNA: ENST00000533079.5

CAPN1-223, Transcript of calpain 1, humanhuman

TSL 3

Gene CAPN1, Length 878 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1-223ENST00000533079 H7BZZ5 65 aa6.17□□□□□ -1.42
CAPN1-223ENST00000533079 CYSTM1Q9H1C7 97 aa6.17□□□□□ -1.42
CAPN1-223ENST00000533079 RBM12B-AS1Q9P1G2 102 aa6.17□□□□□ -1.42
CAPN1-223ENST00000533079 SNURFQ9Y675 71 aa6.17□□□□□ -1.42
CAPN1-223ENST00000533079 H0Y9P7 68 aa6.16□□□□□ -1.42
CAPN1-223ENST00000533079 NDUFS5O43920 106 aa6.15□□□□□ -1.42
CAPN1-223ENST00000533079 MPLKIPQ8TAP9 179 aa6.14□□□□□ -1.43
CAPN1-223ENST00000533079 C1orf64Q8NEQ6 169 aa6.13□□□□□ -1.43
CAPN1-223ENST00000533079 LINC00208Q96KT6 92 aa6.13□□□□□ -1.43
CAPN1-223ENST00000533079 ATP5EP56381 51 aaPredicted RBP6.11□□□□□ -1.43
CAPN1-223ENST00000533079 Q5W150 140 aa6.1□□□□□ -1.43
CAPN1-223ENST00000533079 LOC101927531A0A1B0GV80 90 aa6.09□□□□□ -1.43
CAPN1-223ENST00000533079 HRES1P13985 223 aa6.09□□□□□ -1.43
CAPN1-223ENST00000533079 RPS28P62857 69 aaKnown RBP6.07□□□□□ -1.44
CAPN1-223ENST00000533079 SPANXA2-OT1Q8N9U9 137 aa6.07□□□□□ -1.44
CAPN1-223ENST00000533079 CYP4F30PQ9H0H9 118 aa6.04□□□□□ -1.44
CAPN1-223ENST00000533079 IGKV2-30P06310 120 aa6.01□□□□□ -1.45
CAPN1-223ENST00000533079 NEBP20929 6669 aa6.01□□□□□ -1.45
CAPN1-223ENST00000533079 SERP1Q9Y6X1 66 aa5.98□□□□□ -1.45
CAPN1-223ENST00000533079 KRTAP20-1Q3LI63 56 aa5.96□□□□□ -1.46
CAPN1-223ENST00000533079 MUC12Q9UKN1 5478 aa5.94□□□□□ -1.46
CAPN1-223ENST00000533079 C7orf65Q6ZTY9 151 aa5.93□□□□□ -1.46
CAPN1-223ENST00000533079 IGKV2D-30A0A075B6S6 120 aa5.9□□□□□ -1.46
CAPN1-223ENST00000533079 SPINK7P58062 85 aa5.86□□□□□ -1.47
CAPN1-223ENST00000533079 DMAC1Q96GE9 116 aa5.86□□□□□ -1.47
CAPN1-223ENST00000533079 SMIM26A0A096LP01 95 aa5.85□□□□□ -1.47
CAPN1-223ENST00000533079 ACYP2P14621 99 aa5.85□□□□□ -1.47
CAPN1-223ENST00000533079 A8MUN3 132 aa5.84□□□□□ -1.47
CAPN1-223ENST00000533079 A6NN06 94 aa5.8□□□□□ -1.48
CAPN1-223ENST00000533079 COA5Q86WW8 74 aa5.8□□□□□ -1.48
CAPN1-223ENST00000533079 KRTAP5-9P26371 169 aa5.78□□□□□ -1.48
CAPN1-223ENST00000533079 C4orf26Q17RF5 130 aa5.75□□□□□ -1.49
CAPN1-223ENST00000533079 Q1T7F1 81 aa5.74□□□□□ -1.49
CAPN1-223ENST00000533079 V9GYY9 64 aa5.74□□□□□ -1.49
CAPN1-223ENST00000533079 MDN1Q9NU22 5596 aa5.74□□□□□ -1.49
CAPN1-223ENST00000533079 H1FX-AS1Q4G0G2 97 aa5.72□□□□□ -1.49
CAPN1-223ENST00000533079 KRTAP3-1Q9BYR8 98 aa5.72□□□□□ -1.49
CAPN1-223ENST00000533079 KMT2DO14686 5537 aa5.69□□□□□ -1.5
CAPN1-223ENST00000533079 CHKB-CPT1BH3BT56 60 aa5.69□□□□□ -1.5
CAPN1-223ENST00000533079 KRTAP2-3P0C7H8 128 aa5.69□□□□□ -1.5
CAPN1-223ENST00000533079 KRTAP2-4Q9BYR9 128 aa5.69□□□□□ -1.5
CAPN1-223ENST00000533079 Q5VV11 94 aa5.68□□□□□ -1.5
CAPN1-223ENST00000533079 MT1BP07438 61 aa5.66□□□□□ -1.5
CAPN1-223ENST00000533079 KRTAP10-5P60370 271 aa5.65□□□□□ -1.5
CAPN1-223ENST00000533079 SPTSSBQ8NFR3 76 aa5.65□□□□□ -1.5
CAPN1-223ENST00000533079 LINC01558Q9Y6Z2 57 aa5.65□□□□□ -1.5
CAPN1-223ENST00000533079 KRTAP19-8Q3LI54 63 aa5.62□□□□□ -1.51
CAPN1-223ENST00000533079 SPRR2GQ9BYE4 73 aa5.6□□□□□ -1.51
CAPN1-223ENST00000533079 PRR15LQ9BU68 103 aa5.53□□□□□ -1.52
CAPN1-223ENST00000533079 KRTAP3-3Q9BYR6 98 aa5.52□□□□□ -1.53
CAPN1-223ENST00000533079 S4R3F8 94 aa5.52□□□□□ -1.53
CAPN1-223ENST00000533079 PSPHP1O15172 72 aa5.51□□□□□ -1.53
CAPN1-223ENST00000533079 LCA10Q71F78 164 aa5.5□□□□□ -1.53
CAPN1-223ENST00000533079 A0A1B0GU69 56 aa5.49□□□□□ -1.53
CAPN1-223ENST00000533079 SPRR2EP22531 72 aa5.49□□□□□ -1.53
CAPN1-223ENST00000533079 SPRR2BP35325 72 aa5.49□□□□□ -1.53
CAPN1-223ENST00000533079 SPRR2AP35326 72 aa5.49□□□□□ -1.53
CAPN1-223ENST00000533079 KRTAP2-2Q9BYT5 123 aa5.49□□□□□ -1.53
CAPN1-223ENST00000533079 KRTAP2-1Q9BYU5 128 aa5.49□□□□□ -1.53
CAPN1-223ENST00000533079 SEC61GP60059 68 aa5.48□□□□□ -1.53
CAPN1-223ENST00000533079 SPRR2FQ96RM1 72 aa5.47□□□□□ -1.53
CAPN1-223ENST00000533079 CSAG1Q6PB30 78 aa5.44□□□□□ -1.54
CAPN1-223ENST00000533079 H0YAA0 97 aa5.39□□□□□ -1.55
CAPN1-223ENST00000533079 CRIPTQ9P021 101 aa5.38□□□□□ -1.55
CAPN1-223ENST00000533079 A6NED7 52 aa5.37□□□□□ -1.55
CAPN1-223ENST00000533079 UQCR11O14957 56 aa5.37□□□□□ -1.55
CAPN1-223ENST00000533079 LCE1AQ5T7P2 110 aa5.36□□□□□ -1.55
CAPN1-223ENST00000533079 SPATA8Q6RVD6 105 aa5.35□□□□□ -1.55
CAPN1-223ENST00000533079 KRTAP3-2Q9BYR7 98 aa5.35□□□□□ -1.55
CAPN1-223ENST00000533079 CDC42SE1Q9NRR8 79 aa5.35□□□□□ -1.55
CAPN1-223ENST00000533079 A0A1B0GU33 70 aa5.33□□□□□ -1.56
CAPN1-223ENST00000533079 SPRR2DP22532 72 aa5.33□□□□□ -1.56
CAPN1-223ENST00000533079 BRK1Q8WUW1 75 aa5.33□□□□□ -1.56
CAPN1-223ENST00000533079 KRTAP8-1Q8IUC2 63 aa5.32□□□□□ -1.56
CAPN1-223ENST00000533079 PRO2289Q9P1D8 64 aa5.32□□□□□ -1.56
CAPN1-223ENST00000533079 PRO0628Q9UI54 55 aa5.32□□□□□ -1.56
CAPN1-223ENST00000533079 MIR22HGQ0VDD5 57 aa5.29□□□□□ -1.56
CAPN1-223ENST00000533079 ADM2Q7Z4H4 148 aa5.27□□□□□ -1.57
CAPN1-223ENST00000533079 P0C880 135 aa5.24□□□□□ -1.57
CAPN1-223ENST00000533079 KRTAP12-2P59991 146 aa5.23□□□□□ -1.57
CAPN1-223ENST00000533079 M0QZ58 72 aa5.22□□□□□ -1.57
CAPN1-223ENST00000533079 LCE3BQ5TA77 95 aa5.22□□□□□ -1.57
CAPN1-223ENST00000533079 MT1XP80297 61 aa5.21□□□□□ -1.58
CAPN1-223ENST00000533079 A8MU10 97 aa5.2□□□□□ -1.58
CAPN1-223ENST00000533079 GPR98Q8WXG9 6306 aa5.16□□□□□ -1.58
CAPN1-223ENST00000533079 KRTAP13-4Q3LI77 160 aa5.14□□□□□ -1.59
CAPN1-223ENST00000533079 PLAC4Q8WY50 150 aa5.11□□□□□ -1.59
CAPN1-223ENST00000533079 PMAIP1Q13794 54 aa5.09□□□□□ -1.59
CAPN1-223ENST00000533079 R4GN34 69 aa5.09□□□□□ -1.59
CAPN1-223ENST00000533079 KRTAP4-8A0A0G2JLE6 195 aa5.08□□□□□ -1.6
CAPN1-223ENST00000533079 KRTAP4-8Q9BYQ9 185 aa5.08□□□□□ -1.6
CAPN1-223ENST00000533079 K7ERS5 55 aa5.07□□□□□ -1.6
CAPN1-223ENST00000533079 A0A0D9SG42 100 aa5.02□□□□□ -1.61
CAPN1-223ENST00000533079 SVIPQ8NHG7 77 aa5.02□□□□□ -1.61
CAPN1-223ENST00000533079 DSTQ03001 7570 aaKnown RBP5□□□□□ -1.61
CAPN1-223ENST00000533079 KRTAP12-1P59990 96 aa5□□□□□ -1.61
CAPN1-223ENST00000533079 KRTAP10-12P60413 245 aa4.97□□□□□ -1.61
CAPN1-223ENST00000533079 KRTAP10-7P60409 375 aaPredicted RBP4.94□□□□□ -1.62
CAPN1-223ENST00000533079 LINC01554Q52M75 96 aa4.92□□□□□ -1.62
CAPN1-223ENST00000533079 SPINT4Q6UDR6 99 aa4.92□□□□□ -1.62
Retrieved 100 of 20,778 RNA–protein pairs in 114.7 ms