RNA–Protein interactions for RNA: ENST00000532904.5

UBXN1-213, Transcript of UBX domain protein 1, humanhuman

TSL 2

Gene UBXN1, Length 2,073 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBXN1-213ENST00000532904 H1FX-AS1Q4G0G2 97 aa9.52□□□□□ -0.88
UBXN1-213ENST00000532904 LRP1Q07954 4544 aaKnown RBP9.51□□□□□ -0.89
UBXN1-213ENST00000532904 FAT3Q8TDW7 4589 aa9.48□□□□□ -0.89
UBXN1-213ENST00000532904 KIAA1109Q2LD37 5005 aa9.47□□□□□ -0.89
UBXN1-213ENST00000532904 COX6B2Q6YFQ2 88 aa9.46□□□□□ -0.89
UBXN1-213ENST00000532904 MT1HL1P0DM35 61 aa9.46□□□□□ -0.9
UBXN1-213ENST00000532904 DMBT1Q9UGM3 2413 aaPredicted RBP9.41□□□□□ -0.9
UBXN1-213ENST00000532904 EPPK1P58107 5090 aaKnown RBP9.4□□□□□ -0.91
UBXN1-213ENST00000532904 KRTAP25-1Q3LHN0 102 aa9.34□□□□□ -0.91
UBXN1-213ENST00000532904 RPL37P61927 97 aaKnown RBP9.29□□□□□ -0.92
UBXN1-213ENST00000532904 BIRC6Q9NR09 4857 aa9.29□□□□□ -0.92
UBXN1-213ENST00000532904 K7ERS5 55 aa9.28□□□□□ -0.92
UBXN1-213ENST00000532904 MYCBP2O75592 4640 aa9.27□□□□□ -0.93
UBXN1-213ENST00000532904 XP32Q5T750 250 aa9.27□□□□□ -0.93
UBXN1-213ENST00000532904 KRTAP4-5Q9BYR2 181 aa9.23□□□□□ -0.93
UBXN1-213ENST00000532904 KRTAP3-3Q9BYR6 98 aa9.23□□□□□ -0.93
UBXN1-213ENST00000532904 KRTAP10-6P60371 365 aaPredicted RBP9.21□□□□□ -0.93
UBXN1-213ENST00000532904 TPRXLQ17RH7 258 aa9.18□□□□□ -0.94
UBXN1-213ENST00000532904 KRTAP3-2Q9BYR7 98 aa9.14□□□□□ -0.95
UBXN1-213ENST00000532904 KRTAP13-4Q3LI77 160 aa9.12□□□□□ -0.95
UBXN1-213ENST00000532904 ROMO1P60602 79 aa9.12□□□□□ -0.95
UBXN1-213ENST00000532904 S4R3F8 94 aa9.11□□□□□ -0.95
UBXN1-213ENST00000532904 CRIPTQ9P021 101 aa9.08□□□□□ -0.96
UBXN1-213ENST00000532904 A0A0D9SG42 100 aa9.03□□□□□ -0.96
UBXN1-213ENST00000532904 J3QL48 77 aa8.99□□□□□ -0.97
UBXN1-213ENST00000532904 P0C880 135 aa8.98□□□□□ -0.97
UBXN1-213ENST00000532904 HERC2O95714 4834 aa8.95□□□□□ -0.98
UBXN1-213ENST00000532904 ABCA13Q86UQ4 5058 aa8.95□□□□□ -0.98
UBXN1-213ENST00000532904 H3BS24 57 aa8.94□□□□□ -0.98
UBXN1-213ENST00000532904 LRP2P98164 4655 aa8.87□□□□□ -0.99
UBXN1-213ENST00000532904 KRTAP12-2P59991 146 aa8.84□□□□□ -0.99
UBXN1-213ENST00000532904 SEC61BP60468 96 aaKnown RBP8.84□□□□□ -0.99
UBXN1-213ENST00000532904 LPAP08519 4548 aa8.81□□□□□ -1
UBXN1-213ENST00000532904 KRTAP12-1P59990 96 aa8.79□□□□□ -1
UBXN1-213ENST00000532904 C10orf95Q9H7T3 257 aa8.77□□□□□ -1.01
UBXN1-213ENST00000532904 M0QZ58 72 aa8.73□□□□□ -1.01
UBXN1-213ENST00000532904 SPINT4Q6UDR6 99 aa8.72□□□□□ -1.01
UBXN1-213ENST00000532904 PCLOQ9Y6V0 5065 aa8.65□□□□□ -1.03
UBXN1-213ENST00000532904 MUC17Q685J3 4493 aa8.6□□□□□ -1.03
UBXN1-213ENST00000532904 KRTAP4-1Q9BYQ7 146 aa8.6□□□□□ -1.03
UBXN1-213ENST00000532904 KRTAP15-1Q3LI76 137 aa8.57□□□□□ -1.04
UBXN1-213ENST00000532904 KRTAP19-2Q3LHN2 52 aa8.47□□□□□ -1.05
UBXN1-213ENST00000532904 R4GN34 69 aa8.44□□□□□ -1.06
UBXN1-213ENST00000532904 HERC1Q15751 4861 aa8.41□□□□□ -1.06
UBXN1-213ENST00000532904 HMCN2Q8NDA2 5059 aa8.4□□□□□ -1.07
UBXN1-213ENST00000532904 NDUFAF8A1L188 74 aa8.35□□□□□ -1.07
UBXN1-213ENST00000532904 LORP23490 312 aaPredicted RBP8.31□□□□□ -1.08
UBXN1-213ENST00000532904 FLGP20930 4061 aaPredicted RBP8.24□□□□□ -1.09
UBXN1-213ENST00000532904 MUC2Q02817 5179 aa8.15□□□□□ -1.1
UBXN1-213ENST00000532904 LCE2CQ5TA81 110 aa8.12□□□□□ -1.11
UBXN1-213ENST00000532904 PLAC4Q8WY50 150 aa8.1□□□□□ -1.11
UBXN1-213ENST00000532904 PP632Q6XCG6 107 aa8.04□□□□□ -1.12
UBXN1-213ENST00000532904 CAMK2N1Q7Z7J9 78 aa8.02□□□□□ -1.12
UBXN1-213ENST00000532904 RNF213Q63HN8 5207 aa7.97□□□□□ -1.13
UBXN1-213ENST00000532904 UBR4Q5T4S7 5183 aa7.95□□□□□ -1.14
UBXN1-213ENST00000532904 MT1HP80294 61 aa7.93□□□□□ -1.14
UBXN1-213ENST00000532904 M0R2T5 61 aa7.85□□□□□ -1.15
UBXN1-213ENST00000532904 FAT4Q6V0I7 4981 aa7.81□□□□□ -1.16
UBXN1-213ENST00000532904 KRTAP23-1A1A580 65 aa7.77□□□□□ -1.17
UBXN1-213ENST00000532904 TNP1P09430 55 aa7.77□□□□□ -1.17
UBXN1-213ENST00000532904 LUZP6Q538Z0 58 aa7.74□□□□□ -1.17
UBXN1-213ENST00000532904 SPRR2GQ9BYE4 73 aa7.74□□□□□ -1.17
UBXN1-213ENST00000532904 MT2AP02795 61 aa7.69□□□□□ -1.18
UBXN1-213ENST00000532904 KRTAP9-8Q9BYQ0 159 aa7.69□□□□□ -1.18
UBXN1-213ENST00000532904 KRTAP19-1Q8IUB9 90 aa7.66□□□□□ -1.18
UBXN1-213ENST00000532904 MT1FP04733 61 aa7.65□□□□□ -1.18
UBXN1-213ENST00000532904 KRTAP10-10P60014 251 aa7.64□□□□□ -1.19
UBXN1-213ENST00000532904 SPRR5A0A1B0GTR4 108 aa7.58□□□□□ -1.2
UBXN1-213ENST00000532904 KRTAP19-8Q3LI54 63 aa7.48□□□□□ -1.21
UBXN1-213ENST00000532904 A0A0A0MQY5 61 aa7.47□□□□□ -1.21
UBXN1-213ENST00000532904 KRTAP9-3Q9BYQ3 159 aa7.4□□□□□ -1.22
UBXN1-213ENST00000532904 LCE2AQ5TA79 106 aaPredicted RBP7.4□□□□□ -1.23
UBXN1-213ENST00000532904 LCE3AQ5TA76 89 aa7.34□□□□□ -1.23
UBXN1-213ENST00000532904 MT1BP07438 61 aa7.33□□□□□ -1.24
UBXN1-213ENST00000532904 KRTAP9-2Q9BYQ4 174 aa7.21□□□□□ -1.25
UBXN1-213ENST00000532904 KRTAP8-1Q8IUC2 63 aa7.19□□□□□ -1.26
UBXN1-213ENST00000532904 KRTAP10-5P60370 271 aa7.16□□□□□ -1.26
UBXN1-213ENST00000532904 MT1XP80297 61 aa7.16□□□□□ -1.26
UBXN1-213ENST00000532904 KRTAP9-6A0A140TA67 174 aa7.15□□□□□ -1.26
UBXN1-213ENST00000532904 LCE2BO14633 110 aa7.13□□□□□ -1.27
UBXN1-213ENST00000532904 PRO2289Q9P1D8 64 aa7.06□□□□□ -1.28
UBXN1-213ENST00000532904 KRTAP10-12P60413 245 aa7□□□□□ -1.29
UBXN1-213ENST00000532904 KRTAP12-3P60328 96 aa6.99□□□□□ -1.29
UBXN1-213ENST00000532904 KRTAP10-7P60409 375 aaPredicted RBP6.89□□□□□ -1.31
UBXN1-213ENST00000532904 USH2AO75445 5202 aa6.81□□□□□ -1.32
UBXN1-213ENST00000532904 LCE2DQ5TA82 110 aaPredicted RBP6.78□□□□□ -1.32
UBXN1-213ENST00000532904 INE1O15225 51 aa6.78□□□□□ -1.32
UBXN1-213ENST00000532904 CRCT1Q9UGL9 99 aa6.75□□□□□ -1.33
UBXN1-213ENST00000532904 KRTAP19-6Q3LI70 58 aa6.64□□□□□ -1.35
UBXN1-213ENST00000532904 KRTAP19-5Q3LI72 72 aa6.64□□□□□ -1.35
UBXN1-213ENST00000532904 LCE3CQ5T5A8 94 aa6.6□□□□□ -1.35
UBXN1-213ENST00000532904 SSPOA2VEC9 5147 aa6.59□□□□□ -1.35
UBXN1-213ENST00000532904 KRTAP4-8A0A0G2JLE6 195 aa6.51□□□□□ -1.37
UBXN1-213ENST00000532904 KRTAP4-8Q9BYQ9 185 aa6.51□□□□□ -1.37
UBXN1-213ENST00000532904 FSIP2Q5CZC0 6907 aa6.43□□□□□ -1.38
UBXN1-213ENST00000532904 KRTAP19-7Q3SYF9 63 aa6.39□□□□□ -1.39
UBXN1-213ENST00000532904 KMT2DO14686 5537 aa6.39□□□□□ -1.39
UBXN1-213ENST00000532904 KRTAP9-7A8MTY7 169 aa6.37□□□□□ -1.39
UBXN1-213ENST00000532904 KRTAP9-6A8MVA2 160 aa6.36□□□□□ -1.39
UBXN1-213ENST00000532904 KRTAP19-4Q3LI73 84 aa6.31□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 99.2 ms