RNA–Protein interactions for RNA: ENST00000532699.1

SDHD-213, Transcript of succinate dehydrogenase complex subunit D, humanhuman

TSL 3

Gene SDHD, Length 571 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDHD-213ENST00000532699 COL5A1-AS1Q5SY13 56 aa5.46□□□□□ -1.54
SDHD-213ENST00000532699 TP53AIP1Q9HCN2 124 aa5.46□□□□□ -1.54
SDHD-213ENST00000532699 ETDBQ3ZM63 59 aa5.41□□□□□ -1.54
SDHD-213ENST00000532699 KRTAP20-1Q3LI63 56 aa5.38□□□□□ -1.55
SDHD-213ENST00000532699 TRAV22A0A0B4J277 110 aa5.36□□□□□ -1.55
SDHD-213ENST00000532699 CRIPTQ9P021 101 aa5.36□□□□□ -1.55
SDHD-213ENST00000532699 F8W1H4 67 aa5.35□□□□□ -1.55
SDHD-213ENST00000532699 LOC101927531A0A1B0GV80 90 aa5.34□□□□□ -1.55
SDHD-213ENST00000532699 GTF2H5Q6ZYL4 71 aa5.32□□□□□ -1.56
SDHD-213ENST00000532699 H0YAA0 97 aa5.31□□□□□ -1.56
SDHD-213ENST00000532699 MT1XP80297 61 aa5.31□□□□□ -1.56
SDHD-213ENST00000532699 KRTAP4-12Q9BQ66 201 aa5.31□□□□□ -1.56
SDHD-213ENST00000532699 IMUPQ9GZP8 106 aa5.3□□□□□ -1.56
SDHD-213ENST00000532699 LCE3BQ5TA77 95 aa5.28□□□□□ -1.56
SDHD-213ENST00000532699 H0Y9P7 68 aa5.27□□□□□ -1.57
SDHD-213ENST00000532699 ADM2Q7Z4H4 148 aa5.26□□□□□ -1.57
SDHD-213ENST00000532699 UQCRQO14949 82 aa5.25□□□□□ -1.57
SDHD-213ENST00000532699 NDUFC1O43677 76 aa5.25□□□□□ -1.57
SDHD-213ENST00000532699 SPRR2FQ96RM1 72 aa5.23□□□□□ -1.57
SDHD-213ENST00000532699 FAM240AA0A1B0GVK7 77 aa5.22□□□□□ -1.57
SDHD-213ENST00000532699 PCP4L1A6NKN8 68 aa5.22□□□□□ -1.57
SDHD-213ENST00000532699 HIST1H4AP62805 103 aaKnown RBP5.22□□□□□ -1.57
SDHD-213ENST00000532699 ACYP1P07311 99 aa5.21□□□□□ -1.58
SDHD-213ENST00000532699 A8MUN3 132 aa5.2□□□□□ -1.58
SDHD-213ENST00000532699 ATOX1O00244 68 aa5.2□□□□□ -1.58
SDHD-213ENST00000532699 KRTAP2-3P0C7H8 128 aa5.2□□□□□ -1.58
SDHD-213ENST00000532699 ATP5EP2Q5VTU8 51 aa5.2□□□□□ -1.58
SDHD-213ENST00000532699 KRTAP9-9Q9BYP9 154 aa5.2□□□□□ -1.58
SDHD-213ENST00000532699 KRTAP9-4Q9BYQ2 154 aa5.2□□□□□ -1.58
SDHD-213ENST00000532699 KRTAP2-4Q9BYR9 128 aa5.2□□□□□ -1.58
SDHD-213ENST00000532699 P0C880 135 aa5.19□□□□□ -1.58
SDHD-213ENST00000532699 SPRR2EP22531 72 aa5.18□□□□□ -1.58
SDHD-213ENST00000532699 SPRR2BP35325 72 aa5.18□□□□□ -1.58
SDHD-213ENST00000532699 SPRR2AP35326 72 aa5.18□□□□□ -1.58
SDHD-213ENST00000532699 LINC00208Q96KT6 92 aa5.17□□□□□ -1.58
SDHD-213ENST00000532699 KRTAP4-8A0A0G2JLE6 195 aa5.16□□□□□ -1.58
SDHD-213ENST00000532699 LCE1AQ5T7P2 110 aa5.16□□□□□ -1.58
SDHD-213ENST00000532699 OCR1Q9BZK8 76 aa5.16□□□□□ -1.58
SDHD-213ENST00000532699 KRTAP12-2P59991 146 aa5.15□□□□□ -1.59
SDHD-213ENST00000532699 KRTAP8-1Q8IUC2 63 aa5.13□□□□□ -1.59
SDHD-213ENST00000532699 PRO2289Q9P1D8 64 aa5.13□□□□□ -1.59
SDHD-213ENST00000532699 LINC00643Q86TS7 51 aa5.12□□□□□ -1.59
SDHD-213ENST00000532699 PLAC4Q8WY50 150 aa5.1□□□□□ -1.59
SDHD-213ENST00000532699 KRTAP10-7P60409 375 aaPredicted RBP5.07□□□□□ -1.6
SDHD-213ENST00000532699 R4GN34 69 aa5.07□□□□□ -1.6
SDHD-213ENST00000532699 M0QZ58 72 aa5.06□□□□□ -1.6
SDHD-213ENST00000532699 DMAC1Q96GE9 116 aa5.05□□□□□ -1.6
SDHD-213ENST00000532699 MP68P56378 58 aa5.03□□□□□ -1.6
SDHD-213ENST00000532699 KRTAP2-2Q9BYT5 123 aa5.03□□□□□ -1.6
SDHD-213ENST00000532699 KRTAP2-1Q9BYU5 128 aa5.03□□□□□ -1.6
SDHD-213ENST00000532699 KRTAP10-12P60413 245 aa5.02□□□□□ -1.61
SDHD-213ENST00000532699 SPRR2DP22532 72 aa5□□□□□ -1.61
SDHD-213ENST00000532699 LINC01554Q52M75 96 aa4.99□□□□□ -1.61
SDHD-213ENST00000532699 A0A1B0GV90 55 aa4.98□□□□□ -1.61
SDHD-213ENST00000532699 H3BPC8 53 aa4.97□□□□□ -1.61
SDHD-213ENST00000532699 C20orf197Q8N268 126 aa4.97□□□□□ -1.61
SDHD-213ENST00000532699 LCE1DQ5T752 114 aa4.95□□□□□ -1.62
SDHD-213ENST00000532699 KRTAP4-7Q9BYR0 210 aa4.93□□□□□ -1.62
SDHD-213ENST00000532699 TRAV7A0A075B6U4 112 aa4.88□□□□□ -1.63
SDHD-213ENST00000532699 SCGB1A1P11684 91 aa4.84□□□□□ -1.63
SDHD-213ENST00000532699 KRTAP13-4Q3LI77 160 aa4.84□□□□□ -1.63
SDHD-213ENST00000532699 ACYP2P14621 99 aa4.83□□□□□ -1.64
SDHD-213ENST00000532699 KRTAP4-9Q9BYQ8 210 aa4.81□□□□□ -1.64
SDHD-213ENST00000532699 DSTQ03001 7570 aaKnown RBP4.8□□□□□ -1.64
SDHD-213ENST00000532699 MT-ATP8P03928 68 aa4.79□□□□□ -1.64
SDHD-213ENST00000532699 KRTAP19-7Q3SYF9 63 aa4.77□□□□□ -1.65
SDHD-213ENST00000532699 J3QR89 54 aa4.76□□□□□ -1.65
SDHD-213ENST00000532699 LCE4AQ5TA78 99 aa4.76□□□□□ -1.65
SDHD-213ENST00000532699 LCE5AQ5TCM9 118 aa4.73□□□□□ -1.65
SDHD-213ENST00000532699 SPTSSBQ8NFR3 76 aa4.72□□□□□ -1.65
SDHD-213ENST00000532699 KRTAP4-2Q9BYR5 136 aa4.72□□□□□ -1.65
SDHD-213ENST00000532699 SNURFQ9Y675 71 aa4.72□□□□□ -1.65
SDHD-213ENST00000532699 MT1EP04732 61 aa4.7□□□□□ -1.66
SDHD-213ENST00000532699 GPR98Q8WXG9 6306 aa4.7□□□□□ -1.66
SDHD-213ENST00000532699 CHKB-CPT1BH3BT56 60 aa4.69□□□□□ -1.66
SDHD-213ENST00000532699 SMIM20Q8N5G0 67 aa4.67□□□□□ -1.66
SDHD-213ENST00000532699 KRTAP19-3Q7Z4W3 81 aa4.66□□□□□ -1.66
SDHD-213ENST00000532699 KRTAP19-4Q3LI73 84 aa4.64□□□□□ -1.67
SDHD-213ENST00000532699 SPANXA2-OT1Q8N9U9 137 aa4.64□□□□□ -1.67
SDHD-213ENST00000532699 KRTAP4-11Q9BYQ6 195 aa4.63□□□□□ -1.67
SDHD-213ENST00000532699 CAMK2N1Q7Z7J9 78 aa4.61□□□□□ -1.67
SDHD-213ENST00000532699 KRTAP19-5Q3LI72 72 aa4.56□□□□□ -1.68
SDHD-213ENST00000532699 A0A0D9SG42 100 aa4.54□□□□□ -1.68
SDHD-213ENST00000532699 K7ERU9 68 aa4.54□□□□□ -1.68
SDHD-213ENST00000532699 SPATA8Q6RVD6 105 aa4.54□□□□□ -1.68
SDHD-213ENST00000532699 COA5Q86WW8 74 aa4.54□□□□□ -1.68
SDHD-213ENST00000532699 SERP2Q8N6R1 65 aa4.53□□□□□ -1.68
SDHD-213ENST00000532699 CYSTM1Q9H1C7 97 aa4.52□□□□□ -1.69
SDHD-213ENST00000532699 HMCN1Q96RW7 5635 aa4.52□□□□□ -1.69
SDHD-213ENST00000532699 KRTAP12-1P59990 96 aa4.51□□□□□ -1.69
SDHD-213ENST00000532699 H3BS24 57 aa4.5□□□□□ -1.69
SDHD-213ENST00000532699 MT1GP13640 62 aa4.5□□□□□ -1.69
SDHD-213ENST00000532699 MT1MQ8N339 61 aa4.48□□□□□ -1.69
SDHD-213ENST00000532699 MT1LQ93083 61 aa4.46□□□□□ -1.7
SDHD-213ENST00000532699 SPINT4Q6UDR6 99 aa4.45□□□□□ -1.7
SDHD-213ENST00000532699 KRTAP4-3Q9BYR4 195 aa4.45□□□□□ -1.7
SDHD-213ENST00000532699 AHNAK2Q8IVF2 5795 aa4.45□□□□□ -1.7
SDHD-213ENST00000532699 A0A1B0GU33 70 aa4.42□□□□□ -1.7
SDHD-213ENST00000532699 MT4P47944 62 aa4.41□□□□□ -1.7
SDHD-213ENST00000532699 SERP1Q9Y6X1 66 aa4.4□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 94 ms