RNA–Protein interactions for RNA: ENST00000532485.5

ACER3-212, Transcript of alkaline ceramidase 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene ACER3, Length 7,378 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACER3-212ENST00000532485 PKHD1P08F94 4074 aa4.44□□□□□ -1.7
ACER3-212ENST00000532485 FAT3Q8TDW7 4589 aa4.44□□□□□ -1.7
ACER3-212ENST00000532485 TPRXLQ17RH7 258 aa4.43□□□□□ -1.7
ACER3-212ENST00000532485 DNAH2Q9P225 4427 aa4.42□□□□□ -1.7
ACER3-212ENST00000532485 DNAH17Q9UFH2 4485 aa4.42□□□□□ -1.7
ACER3-212ENST00000532485 LCE2DQ5TA82 110 aaPredicted RBP4.42□□□□□ -1.7
ACER3-212ENST00000532485 KRTAP3-1Q9BYR8 98 aa4.41□□□□□ -1.7
ACER3-212ENST00000532485 C10orf95Q9H7T3 257 aa4.4□□□□□ -1.7
ACER3-212ENST00000532485 HECTD4Q9Y4D8 3996 aa4.4□□□□□ -1.7
ACER3-212ENST00000532485 KRTAP10-4P60372 401 aaPredicted RBP4.37□□□□□ -1.71
ACER3-212ENST00000532485 MT1HL1P0DM35 61 aa4.36□□□□□ -1.71
ACER3-212ENST00000532485 PLAC4Q8WY50 150 aa4.35□□□□□ -1.71
ACER3-212ENST00000532485 LRP1Q07954 4544 aaKnown RBP4.35□□□□□ -1.71
ACER3-212ENST00000532485 DYNC1H1Q14204 4646 aaKnown RBP4.35□□□□□ -1.71
ACER3-212ENST00000532485 DYNC2H1Q8NCM8 4307 aaKnown RBP4.33□□□□□ -1.72
ACER3-212ENST00000532485 HYDINQ4G0P3 5121 aa4.33□□□□□ -1.72
ACER3-212ENST00000532485 PCLOQ9Y6V0 5065 aa4.32□□□□□ -1.72
ACER3-212ENST00000532485 KRTAP25-1Q3LHN0 102 aa4.31□□□□□ -1.72
ACER3-212ENST00000532485 LUZP6Q538Z0 58 aa4.29□□□□□ -1.72
ACER3-212ENST00000532485 ALMS1Q8TCU4 4167 aa4.29□□□□□ -1.72
ACER3-212ENST00000532485 KRTAP10-10P60014 251 aa4.28□□□□□ -1.72
ACER3-212ENST00000532485 KIAA1109Q2LD37 5005 aa4.28□□□□□ -1.72
ACER3-212ENST00000532485 SACSQ9NZJ4 4579 aa4.28□□□□□ -1.72
ACER3-212ENST00000532485 FAT2Q9NYQ8 4349 aa4.26□□□□□ -1.73
ACER3-212ENST00000532485 APOBP04114 4563 aaKnown RBP4.25□□□□□ -1.73
ACER3-212ENST00000532485 RYR3Q15413 4870 aa4.24□□□□□ -1.73
ACER3-212ENST00000532485 KMT2CQ8NEZ4 4911 aaKnown RBP4.23□□□□□ -1.73
ACER3-212ENST00000532485 KRTAP12-2P59991 146 aa4.23□□□□□ -1.73
ACER3-212ENST00000532485 KRTAP13-4Q3LI77 160 aa4.23□□□□□ -1.73
ACER3-212ENST00000532485 KRTAP17-1Q9BYP8 105 aa4.18□□□□□ -1.74
ACER3-212ENST00000532485 KRTAP10-6P60371 365 aaPredicted RBP4.17□□□□□ -1.74
ACER3-212ENST00000532485 BIRC6Q9NR09 4857 aa4.17□□□□□ -1.74
ACER3-212ENST00000532485 TNP1P09430 55 aa4.16□□□□□ -1.74
ACER3-212ENST00000532485 KRTAP3-3Q9BYR6 98 aa4.15□□□□□ -1.74
ACER3-212ENST00000532485 NDUFAF8A1L188 74 aa4.14□□□□□ -1.75
ACER3-212ENST00000532485 LRP2P98164 4655 aa4.13□□□□□ -1.75
ACER3-212ENST00000532485 KRTAP12-1P59990 96 aa4.12□□□□□ -1.75
ACER3-212ENST00000532485 KRTAP3-2Q9BYR7 98 aa4.08□□□□□ -1.76
ACER3-212ENST00000532485 PKD1P98161 4303 aa4.07□□□□□ -1.76
ACER3-212ENST00000532485 LPAP08519 4548 aa4.06□□□□□ -1.76
ACER3-212ENST00000532485 HSPG2P98160 4391 aa4.04□□□□□ -1.76
ACER3-212ENST00000532485 LORP23490 312 aaPredicted RBP4.04□□□□□ -1.76
ACER3-212ENST00000532485 KRTAP4-1Q9BYQ7 146 aa4.04□□□□□ -1.76
ACER3-212ENST00000532485 ABCA13Q86UQ4 5058 aa4.03□□□□□ -1.76
ACER3-212ENST00000532485 HERC2O95714 4834 aa3.97□□□□□ -1.77
ACER3-212ENST00000532485 EPPK1P58107 5090 aaKnown RBP3.9□□□□□ -1.78
ACER3-212ENST00000532485 A0A0A0MQY5 61 aa3.9□□□□□ -1.79
ACER3-212ENST00000532485 PP632Q6XCG6 107 aa3.88□□□□□ -1.79
ACER3-212ENST00000532485 PKHD1L1Q86WI1 4243 aa3.88□□□□□ -1.79
ACER3-212ENST00000532485 PRO2289Q9P1D8 64 aa3.87□□□□□ -1.79
ACER3-212ENST00000532485 HERC1Q15751 4861 aa3.86□□□□□ -1.79
ACER3-212ENST00000532485 MUC2Q02817 5179 aa3.84□□□□□ -1.79
ACER3-212ENST00000532485 TNXBP22105 4242 aa3.81□□□□□ -1.8
ACER3-212ENST00000532485 MT1HP80294 61 aa3.73□□□□□ -1.81
ACER3-212ENST00000532485 FSIP2Q5CZC0 6907 aa3.72□□□□□ -1.81
ACER3-212ENST00000532485 RNF213Q63HN8 5207 aa3.69□□□□□ -1.82
ACER3-212ENST00000532485 KRTAP15-1Q3LI76 137 aa3.67□□□□□ -1.82
ACER3-212ENST00000532485 LCE3AQ5TA76 89 aa3.66□□□□□ -1.82
ACER3-212ENST00000532485 MT1FP04733 61 aa3.66□□□□□ -1.82
ACER3-212ENST00000532485 MT2AP02795 61 aa3.66□□□□□ -1.82
ACER3-212ENST00000532485 KRTAP10-12P60413 245 aa3.66□□□□□ -1.82
ACER3-212ENST00000532485 USH2AO75445 5202 aa3.65□□□□□ -1.83
ACER3-212ENST00000532485 FAT4Q6V0I7 4981 aa3.64□□□□□ -1.83
ACER3-212ENST00000532485 HMCN2Q8NDA2 5059 aa3.63□□□□□ -1.83
ACER3-212ENST00000532485 CRCT1Q9UGL9 99 aa3.63□□□□□ -1.83
ACER3-212ENST00000532485 UBR4Q5T4S7 5183 aa3.61□□□□□ -1.83
ACER3-212ENST00000532485 LCE2BO14633 110 aa3.59□□□□□ -1.83
ACER3-212ENST00000532485 KRTAP12-3P60328 96 aa3.56□□□□□ -1.84
ACER3-212ENST00000532485 SPRR2GQ9BYE4 73 aa3.52□□□□□ -1.85
ACER3-212ENST00000532485 LCE2AQ5TA79 106 aaPredicted RBP3.52□□□□□ -1.85
ACER3-212ENST00000532485 KRTAP19-1Q8IUB9 90 aa3.52□□□□□ -1.85
ACER3-212ENST00000532485 FLGP20930 4061 aaPredicted RBP3.51□□□□□ -1.85
ACER3-212ENST00000532485 LCE2CQ5TA81 110 aa3.51□□□□□ -1.85
ACER3-212ENST00000532485 KRTAP9-8Q9BYQ0 159 aa3.45□□□□□ -1.86
ACER3-212ENST00000532485 MUC17Q685J3 4493 aa3.44□□□□□ -1.86
ACER3-212ENST00000532485 KRTAP19-2Q3LHN2 52 aa3.43□□□□□ -1.86
ACER3-212ENST00000532485 KRTAP10-7P60409 375 aaPredicted RBP3.41□□□□□ -1.86
ACER3-212ENST00000532485 KRTAP8-1Q8IUC2 63 aa3.4□□□□□ -1.87
ACER3-212ENST00000532485 GPR98Q8WXG9 6306 aa3.39□□□□□ -1.87
ACER3-212ENST00000532485 KRTAP19-5Q3LI72 72 aa3.36□□□□□ -1.87
ACER3-212ENST00000532485 KRTAP4-8A0A0G2JLE6 195 aa3.36□□□□□ -1.87
ACER3-212ENST00000532485 KRTAP4-8Q9BYQ9 185 aa3.36□□□□□ -1.87
ACER3-212ENST00000532485 MT1BP07438 61 aa3.35□□□□□ -1.87
ACER3-212ENST00000532485 MT1XP80297 61 aa3.34□□□□□ -1.88
ACER3-212ENST00000532485 KRTAP10-5P60370 271 aa3.31□□□□□ -1.88
ACER3-212ENST00000532485 OBSCNQ5VST9 7968 aa3.31□□□□□ -1.88
ACER3-212ENST00000532485 KRTAP9-3Q9BYQ3 159 aa3.3□□□□□ -1.88
ACER3-212ENST00000532485 KRTAP23-1A1A580 65 aa3.29□□□□□ -1.88
ACER3-212ENST00000532485 KRTAP19-8Q3LI54 63 aa3.29□□□□□ -1.88
ACER3-212ENST00000532485 SPRR2FQ96RM1 72 aa3.27□□□□□ -1.89
ACER3-212ENST00000532485 KMT2DO14686 5537 aa3.23□□□□□ -1.89
ACER3-212ENST00000532485 MDN1Q9NU22 5596 aa3.22□□□□□ -1.89
ACER3-212ENST00000532485 DSTQ03001 7570 aaKnown RBP3.21□□□□□ -1.9
ACER3-212ENST00000532485 SYNE1Q8NF91 8797 aaKnown RBP3.17□□□□□ -1.9
ACER3-212ENST00000532485 KRTAP4-7Q9BYR0 210 aa3.17□□□□□ -1.9
ACER3-212ENST00000532485 LCE3CQ5T5A8 94 aa3.16□□□□□ -1.9
ACER3-212ENST00000532485 SSPOA2VEC9 5147 aa3.14□□□□□ -1.91
ACER3-212ENST00000532485 FCGBPQ9Y6R7 5405 aaPredicted RBP3.09□□□□□ -1.91
ACER3-212ENST00000532485 MT1GP13640 62 aa3.08□□□□□ -1.92
ACER3-212ENST00000532485 SYNE2Q8WXH0 6885 aaKnown RBP3.07□□□□□ -1.92
Retrieved 100 of 20,778 RNA–protein pairs in 111.9 ms