RNA–Protein interactions for RNA: ENST00000532409.5

CTSB-225, Transcript of cathepsin B, humanhuman

TSL 2

Gene CTSB, Length 839 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSB-225ENST00000532409 MP68P56378 58 aa7.32□□□□□ -1.24
CTSB-225ENST00000532409 KRTAP3-1Q9BYR8 98 aa7.32□□□□□ -1.24
CTSB-225ENST00000532409 TRAV22A0A0B4J277 110 aa7.31□□□□□ -1.24
CTSB-225ENST00000532409 C20orf197Q8N268 126 aa7.3□□□□□ -1.24
CTSB-225ENST00000532409 H0Y9P7 68 aa7.28□□□□□ -1.24
CTSB-225ENST00000532409 NDUFC1O43677 76 aa7.28□□□□□ -1.24
CTSB-225ENST00000532409 KRTAP19-1Q8IUB9 90 aa7.28□□□□□ -1.24
CTSB-225ENST00000532409 FCGBPQ9Y6R7 5405 aaPredicted RBP7.26□□□□□ -1.25
CTSB-225ENST00000532409 C1orf64Q8NEQ6 169 aa7.25□□□□□ -1.25
CTSB-225ENST00000532409 LINC00208Q96KT6 92 aa7.23□□□□□ -1.25
CTSB-225ENST00000532409 SNURFQ9Y675 71 aa7.22□□□□□ -1.25
CTSB-225ENST00000532409 LOC101927531A0A1B0GV80 90 aa7.21□□□□□ -1.26
CTSB-225ENST00000532409 KRTAP9-1A8MXZ3 250 aaPredicted RBP7.21□□□□□ -1.26
CTSB-225ENST00000532409 CYP4F30PQ9H0H9 118 aa7.2□□□□□ -1.26
CTSB-225ENST00000532409 S4R3F8 94 aa7.2□□□□□ -1.26
CTSB-225ENST00000532409 H7BZZ5 65 aa7.19□□□□□ -1.26
CTSB-225ENST00000532409 LCA10Q71F78 164 aa7.18□□□□□ -1.26
CTSB-225ENST00000532409 CYSTM1Q9H1C7 97 aa7.18□□□□□ -1.26
CTSB-225ENST00000532409 TMEM258P61165 79 aa7.16□□□□□ -1.26
CTSB-225ENST00000532409 KRTAP19-6Q3LI70 58 aa7.12□□□□□ -1.27
CTSB-225ENST00000532409 SPANXA2-OT1Q8N9U9 137 aa7.12□□□□□ -1.27
CTSB-225ENST00000532409 ATP5EP56381 51 aaPredicted RBP7.11□□□□□ -1.27
CTSB-225ENST00000532409 CSAG1Q6PB30 78 aa7.11□□□□□ -1.27
CTSB-225ENST00000532409 MACF1Q9UPN3 7388 aaKnown RBP7.09□□□□□ -1.27
CTSB-225ENST00000532409 KRTAP9-7A8MTY7 169 aa7.08□□□□□ -1.28
CTSB-225ENST00000532409 SYNE2Q8WXH0 6885 aaKnown RBP7.02□□□□□ -1.29
CTSB-225ENST00000532409 RPS28P62857 69 aaKnown RBP6.97□□□□□ -1.29
CTSB-225ENST00000532409 MT1BP07438 61 aa6.96□□□□□ -1.3
CTSB-225ENST00000532409 SPRR2GQ9BYE4 73 aa6.96□□□□□ -1.3
CTSB-225ENST00000532409 SERP1Q9Y6X1 66 aa6.94□□□□□ -1.3
CTSB-225ENST00000532409 DMAC1Q96GE9 116 aa6.93□□□□□ -1.3
CTSB-225ENST00000532409 A8MUN3 132 aa6.92□□□□□ -1.3
CTSB-225ENST00000532409 KRTAP19-8Q3LI54 63 aa6.92□□□□□ -1.3
CTSB-225ENST00000532409 Q5VV11 94 aa6.91□□□□□ -1.3
CTSB-225ENST00000532409 ACYP2P14621 99 aa6.89□□□□□ -1.31
CTSB-225ENST00000532409 A6NN06 94 aa6.81□□□□□ -1.32
CTSB-225ENST00000532409 COA5Q86WW8 74 aa6.81□□□□□ -1.32
CTSB-225ENST00000532409 H0YAA0 97 aa6.8□□□□□ -1.32
CTSB-225ENST00000532409 ADM2Q7Z4H4 148 aa6.8□□□□□ -1.32
CTSB-225ENST00000532409 CRIPTQ9P021 101 aa6.8□□□□□ -1.32
CTSB-225ENST00000532409 SMIM26A0A096LP01 95 aa6.76□□□□□ -1.33
CTSB-225ENST00000532409 KRTAP10-5P60370 271 aa6.75□□□□□ -1.33
CTSB-225ENST00000532409 CHKB-CPT1BH3BT56 60 aa6.72□□□□□ -1.33
CTSB-225ENST00000532409 KRTAP6-3Q3LI67 103 aa6.72□□□□□ -1.33
CTSB-225ENST00000532409 P0C880 135 aa6.69□□□□□ -1.34
CTSB-225ENST00000532409 SPTSSBQ8NFR3 76 aa6.68□□□□□ -1.34
CTSB-225ENST00000532409 V9GYY9 64 aa6.66□□□□□ -1.34
CTSB-225ENST00000532409 Q1T7F1 81 aa6.64□□□□□ -1.35
CTSB-225ENST00000532409 LINC01558Q9Y6Z2 57 aa6.59□□□□□ -1.35
CTSB-225ENST00000532409 NEBP20929 6669 aa6.59□□□□□ -1.35
CTSB-225ENST00000532409 R4GN34 69 aa6.58□□□□□ -1.36
CTSB-225ENST00000532409 M0QZ58 72 aa6.56□□□□□ -1.36
CTSB-225ENST00000532409 MUC12Q9UKN1 5478 aa6.55□□□□□ -1.36
CTSB-225ENST00000532409 MT1XP80297 61 aa6.54□□□□□ -1.36
CTSB-225ENST00000532409 PLAC4Q8WY50 150 aa6.51□□□□□ -1.37
CTSB-225ENST00000532409 LINC01554Q52M75 96 aa6.5□□□□□ -1.37
CTSB-225ENST00000532409 PRR15LQ9BU68 103 aa6.48□□□□□ -1.37
CTSB-225ENST00000532409 KMT2DO14686 5537 aa6.48□□□□□ -1.37
CTSB-225ENST00000532409 SEC61GP60059 68 aa6.46□□□□□ -1.38
CTSB-225ENST00000532409 A0A1B0GU69 56 aa6.45□□□□□ -1.38
CTSB-225ENST00000532409 PRO2289Q9P1D8 64 aa6.45□□□□□ -1.38
CTSB-225ENST00000532409 KRTAP5-9P26371 169 aa6.44□□□□□ -1.38
CTSB-225ENST00000532409 H3BS24 57 aa6.41□□□□□ -1.38
CTSB-225ENST00000532409 PSPHP1O15172 72 aa6.41□□□□□ -1.38
CTSB-225ENST00000532409 MDN1Q9NU22 5596 aa6.35□□□□□ -1.39
CTSB-225ENST00000532409 KRTAP12-2P59991 146 aa6.3□□□□□ -1.4
CTSB-225ENST00000532409 SPRR2FQ96RM1 72 aa6.3□□□□□ -1.4
CTSB-225ENST00000532409 A0A1B0GU33 70 aa6.29□□□□□ -1.4
CTSB-225ENST00000532409 UQCR11O14957 56 aa6.28□□□□□ -1.4
CTSB-225ENST00000532409 KRTAP13-4Q3LI77 160 aa6.28□□□□□ -1.4
CTSB-225ENST00000532409 KRTAP4-8A0A0G2JLE6 195 aa6.27□□□□□ -1.41
CTSB-225ENST00000532409 KRTAP8-1Q8IUC2 63 aa6.27□□□□□ -1.41
CTSB-225ENST00000532409 KRTAP4-8Q9BYQ9 185 aa6.27□□□□□ -1.41
CTSB-225ENST00000532409 KRTAP10-7P60409 375 aaPredicted RBP6.26□□□□□ -1.41
CTSB-225ENST00000532409 A6NED7 52 aa6.25□□□□□ -1.41
CTSB-225ENST00000532409 SVIPQ8NHG7 77 aa6.24□□□□□ -1.41
CTSB-225ENST00000532409 SPATA8Q6RVD6 105 aa6.22□□□□□ -1.41
CTSB-225ENST00000532409 KRTAP20-1Q3LI63 56 aa6.21□□□□□ -1.42
CTSB-225ENST00000532409 CDC42SE1Q9NRR8 79 aa6.2□□□□□ -1.42
CTSB-225ENST00000532409 SPRR2EP22531 72 aa6.18□□□□□ -1.42
CTSB-225ENST00000532409 SPRR2BP35325 72 aa6.18□□□□□ -1.42
CTSB-225ENST00000532409 SPRR2AP35326 72 aa6.18□□□□□ -1.42
CTSB-225ENST00000532409 MIR22HGQ0VDD5 57 aa6.18□□□□□ -1.42
CTSB-225ENST00000532409 KRTAP10-12P60413 245 aa6.17□□□□□ -1.42
CTSB-225ENST00000532409 BRK1Q8WUW1 75 aa6.13□□□□□ -1.43
CTSB-225ENST00000532409 LCE1AQ5T7P2 110 aa6.12□□□□□ -1.43
CTSB-225ENST00000532409 A0A0D9SG42 100 aa6.08□□□□□ -1.44
CTSB-225ENST00000532409 CAMK2N1Q7Z7J9 78 aa6.07□□□□□ -1.44
CTSB-225ENST00000532409 PRO0628Q9UI54 55 aa6.07□□□□□ -1.44
CTSB-225ENST00000532409 KRTAP2-3P0C7H8 128 aa6.04□□□□□ -1.44
CTSB-225ENST00000532409 KRTAP2-4Q9BYR9 128 aa6.04□□□□□ -1.44
CTSB-225ENST00000532409 A8MU10 97 aa6.02□□□□□ -1.45
CTSB-225ENST00000532409 SPRR2DP22532 72 aa5.97□□□□□ -1.45
CTSB-225ENST00000532409 SPINT4Q6UDR6 99 aa5.96□□□□□ -1.46
CTSB-225ENST00000532409 K7ERS5 55 aa5.95□□□□□ -1.46
CTSB-225ENST00000532409 KRTAP12-1P59990 96 aa5.94□□□□□ -1.46
CTSB-225ENST00000532409 KRTAP2-2Q9BYT5 123 aa5.85□□□□□ -1.47
CTSB-225ENST00000532409 KRTAP2-1Q9BYU5 128 aa5.85□□□□□ -1.47
CTSB-225ENST00000532409 PMAIP1Q13794 54 aa5.84□□□□□ -1.47
CTSB-225ENST00000532409 KRTAP19-7Q3SYF9 63 aa5.84□□□□□ -1.47
Retrieved 100 of 20,778 RNA–protein pairs in 69.4 ms