RNA–Protein interactions for RNA: ENST00000532370.1

CTSB-223, Transcript of cathepsin B, humanhuman

TSL 2

Gene CTSB, Length 693 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSB-223ENST00000532370 LCA10Q71F78 164 aa8.12□□□□□ -1.11
CTSB-223ENST00000532370 LINC00208Q96KT6 92 aa8.1□□□□□ -1.11
CTSB-223ENST00000532370 TRAV7A0A075B6U4 112 aa8.09□□□□□ -1.11
CTSB-223ENST00000532370 KRTAP19-1Q8IUB9 90 aa8.07□□□□□ -1.12
CTSB-223ENST00000532370 CSAG1Q6PB30 78 aa8.06□□□□□ -1.12
CTSB-223ENST00000532370 KRTAP3-3Q9BYR6 98 aa8.04□□□□□ -1.12
CTSB-223ENST00000532370 KLKP1Q107X0 134 aa8.02□□□□□ -1.13
CTSB-223ENST00000532370 SERP2Q8N6R1 65 aa7.98□□□□□ -1.13
CTSB-223ENST00000532370 KRTAP9-7A8MTY7 169 aa7.94□□□□□ -1.14
CTSB-223ENST00000532370 KRTAP9-1A8MXZ3 250 aaPredicted RBP7.93□□□□□ -1.14
CTSB-223ENST00000532370 KRTAP19-6Q3LI70 58 aa7.93□□□□□ -1.14
CTSB-223ENST00000532370 A8MUN3 132 aa7.92□□□□□ -1.14
CTSB-223ENST00000532370 NDUFC1O43677 76 aa7.85□□□□□ -1.15
CTSB-223ENST00000532370 C20orf197Q8N268 126 aa7.85□□□□□ -1.15
CTSB-223ENST00000532370 DMAC1Q96GE9 116 aa7.85□□□□□ -1.15
CTSB-223ENST00000532370 SNURFQ9Y675 71 aa7.85□□□□□ -1.15
CTSB-223ENST00000532370 COX7CP15954 63 aa7.84□□□□□ -1.15
CTSB-223ENST00000532370 SPRR2GQ9BYE4 73 aa7.83□□□□□ -1.16
CTSB-223ENST00000532370 MACF1Q9UPN3 7388 aaKnown RBP7.83□□□□□ -1.16
CTSB-223ENST00000532370 SYNE2Q8WXH0 6885 aaKnown RBP7.79□□□□□ -1.16
CTSB-223ENST00000532370 MT1BP07438 61 aa7.78□□□□□ -1.16
CTSB-223ENST00000532370 KRTAP19-8Q3LI54 63 aa7.76□□□□□ -1.17
CTSB-223ENST00000532370 SPANXA2-OT1Q8N9U9 137 aa7.75□□□□□ -1.17
CTSB-223ENST00000532370 ANAPC13Q9BS18 74 aa7.75□□□□□ -1.17
CTSB-223ENST00000532370 Q5VV11 94 aa7.74□□□□□ -1.17
CTSB-223ENST00000532370 H0YAA0 97 aa7.72□□□□□ -1.17
CTSB-223ENST00000532370 ADM2Q7Z4H4 148 aa7.7□□□□□ -1.18
CTSB-223ENST00000532370 CRIPTQ9P021 101 aa7.7□□□□□ -1.18
CTSB-223ENST00000532370 ACYP2P14621 99 aa7.68□□□□□ -1.18
CTSB-223ENST00000532370 CYSTM1Q9H1C7 97 aa7.66□□□□□ -1.18
CTSB-223ENST00000532370 H7BZZ5 65 aa7.64□□□□□ -1.19
CTSB-223ENST00000532370 A6NN06 94 aa7.61□□□□□ -1.19
CTSB-223ENST00000532370 CCDC179H3BU77 68 aa7.59□□□□□ -1.19
CTSB-223ENST00000532370 P0C880 135 aa7.57□□□□□ -1.2
CTSB-223ENST00000532370 KRTAP10-5P60370 271 aa7.55□□□□□ -1.2
CTSB-223ENST00000532370 KRTAP3-2Q9BYR7 98 aa7.53□□□□□ -1.2
CTSB-223ENST00000532370 CHKB-CPT1BH3BT56 60 aa7.52□□□□□ -1.21
CTSB-223ENST00000532370 SPTSSBQ8NFR3 76 aa7.51□□□□□ -1.21
CTSB-223ENST00000532370 COA5Q86WW8 74 aa7.47□□□□□ -1.21
CTSB-223ENST00000532370 R4GN34 69 aa7.46□□□□□ -1.22
CTSB-223ENST00000532370 KRTAP6-3Q3LI67 103 aa7.44□□□□□ -1.22
CTSB-223ENST00000532370 M0QZ58 72 aa7.43□□□□□ -1.22
CTSB-223ENST00000532370 ATP5EP56381 51 aaPredicted RBP7.4□□□□□ -1.22
CTSB-223ENST00000532370 MUC12Q9UKN1 5478 aa7.37□□□□□ -1.23
CTSB-223ENST00000532370 TMEM258P61165 79 aa7.36□□□□□ -1.23
CTSB-223ENST00000532370 PLAC4Q8WY50 150 aa7.36□□□□□ -1.23
CTSB-223ENST00000532370 MT1XP80297 61 aa7.34□□□□□ -1.23
CTSB-223ENST00000532370 LINC01554Q52M75 96 aa7.34□□□□□ -1.23
CTSB-223ENST00000532370 KMT2DO14686 5537 aa7.31□□□□□ -1.24
CTSB-223ENST00000532370 NEBP20929 6669 aa7.31□□□□□ -1.24
CTSB-223ENST00000532370 PRO2289Q9P1D8 64 aa7.27□□□□□ -1.25
CTSB-223ENST00000532370 MDN1Q9NU22 5596 aa7.22□□□□□ -1.25
CTSB-223ENST00000532370 PCP4P48539 62 aa7.17□□□□□ -1.26
CTSB-223ENST00000532370 SEC61GP60059 68 aa7.16□□□□□ -1.26
CTSB-223ENST00000532370 KRTAP5-9P26371 169 aa7.15□□□□□ -1.26
CTSB-223ENST00000532370 KRTAP13-4Q3LI77 160 aa7.14□□□□□ -1.27
CTSB-223ENST00000532370 SERP1Q9Y6X1 66 aa7.13□□□□□ -1.27
CTSB-223ENST00000532370 KRTAP12-2P59991 146 aa7.07□□□□□ -1.28
CTSB-223ENST00000532370 A0A1B0GU69 56 aa7.06□□□□□ -1.28
CTSB-223ENST00000532370 LINC01558Q9Y6Z2 57 aa7.04□□□□□ -1.28
CTSB-223ENST00000532370 A0A1B0GU33 70 aa7.03□□□□□ -1.28
CTSB-223ENST00000532370 KRTAP10-7P60409 375 aaPredicted RBP7.02□□□□□ -1.29
CTSB-223ENST00000532370 KRTAP4-8A0A0G2JLE6 195 aa7□□□□□ -1.29
CTSB-223ENST00000532370 KRTAP8-1Q8IUC2 63 aa7□□□□□ -1.29
CTSB-223ENST00000532370 KRTAP4-8Q9BYQ9 185 aa7□□□□□ -1.29
CTSB-223ENST00000532370 SPRR2FQ96RM1 72 aa6.99□□□□□ -1.29
CTSB-223ENST00000532370 PRR15LQ9BU68 103 aa6.98□□□□□ -1.29
CTSB-223ENST00000532370 KRTAP10-12P60413 245 aa6.94□□□□□ -1.3
CTSB-223ENST00000532370 SPATA8Q6RVD6 105 aa6.93□□□□□ -1.3
CTSB-223ENST00000532370 A0A0D9SG42 100 aa6.92□□□□□ -1.3
CTSB-223ENST00000532370 KRTAP20-1Q3LI63 56 aa6.92□□□□□ -1.3
CTSB-223ENST00000532370 RPS28P62857 69 aaKnown RBP6.88□□□□□ -1.31
CTSB-223ENST00000532370 CAMK2N1Q7Z7J9 78 aa6.88□□□□□ -1.31
CTSB-223ENST00000532370 SPRR2EP22531 72 aa6.86□□□□□ -1.31
CTSB-223ENST00000532370 SPRR2BP35325 72 aa6.86□□□□□ -1.31
CTSB-223ENST00000532370 SPRR2AP35326 72 aa6.86□□□□□ -1.31
CTSB-223ENST00000532370 Q1T7F1 81 aa6.86□□□□□ -1.31
CTSB-223ENST00000532370 V9GYY9 64 aa6.86□□□□□ -1.31
CTSB-223ENST00000532370 SMIM26A0A096LP01 95 aa6.85□□□□□ -1.31
CTSB-223ENST00000532370 LCE1AQ5T7P2 110 aa6.8□□□□□ -1.32
CTSB-223ENST00000532370 SPINT4Q6UDR6 99 aa6.79□□□□□ -1.32
CTSB-223ENST00000532370 KRTAP12-1P59990 96 aa6.77□□□□□ -1.33
CTSB-223ENST00000532370 UQCR11O14957 56 aa6.76□□□□□ -1.33
CTSB-223ENST00000532370 A8MU10 97 aa6.75□□□□□ -1.33
CTSB-223ENST00000532370 PSPHP1O15172 72 aa6.72□□□□□ -1.33
CTSB-223ENST00000532370 KRTAP2-3P0C7H8 128 aa6.68□□□□□ -1.34
CTSB-223ENST00000532370 KRTAP2-4Q9BYR9 128 aa6.68□□□□□ -1.34
CTSB-223ENST00000532370 MIR22HGQ0VDD5 57 aa6.64□□□□□ -1.35
CTSB-223ENST00000532370 SPRR2DP22532 72 aa6.62□□□□□ -1.35
CTSB-223ENST00000532370 KRTAP19-7Q3SYF9 63 aa6.55□□□□□ -1.36
CTSB-223ENST00000532370 A6NED7 52 aa6.52□□□□□ -1.37
CTSB-223ENST00000532370 MT1EP04732 61 aa6.48□□□□□ -1.37
CTSB-223ENST00000532370 C10orf95Q9H7T3 257 aa6.48□□□□□ -1.37
CTSB-223ENST00000532370 KRTAP2-2Q9BYT5 123 aa6.47□□□□□ -1.37
CTSB-223ENST00000532370 KRTAP2-1Q9BYU5 128 aa6.47□□□□□ -1.37
CTSB-223ENST00000532370 KRTAP19-5Q3LI72 72 aa6.43□□□□□ -1.38
CTSB-223ENST00000532370 LCE3BQ5TA77 95 aa6.43□□□□□ -1.38
CTSB-223ENST00000532370 K7ERS5 55 aa6.42□□□□□ -1.38
CTSB-223ENST00000532370 LCE5AQ5TCM9 118 aa6.39□□□□□ -1.39
CTSB-223ENST00000532370 KRTAP19-3Q7Z4W3 81 aa6.38□□□□□ -1.39
Retrieved 100 of 20,778 RNA–protein pairs in 6.6 ms