RNA–Protein interactions for RNA: ENST00000530981.1

SF3B2-210, Transcript of splicing factor 3b subunit 2, humanhuman

TSL 5

Gene SF3B2, Length 1,080 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B2-210ENST00000530981 SCGB1A1P11684 91 aa4.22□□□□□ -1.73
SF3B2-210ENST00000530981 MP68P56378 58 aa4.22□□□□□ -1.73
SF3B2-210ENST00000530981 KRTAP19-1Q8IUB9 90 aa4.22□□□□□ -1.73
SF3B2-210ENST00000530981 CSAG1Q6PB30 78 aa4.21□□□□□ -1.74
SF3B2-210ENST00000530981 TRAV7A0A075B6U4 112 aa4.18□□□□□ -1.74
SF3B2-210ENST00000530981 H3BPC8 53 aa4.17□□□□□ -1.74
SF3B2-210ENST00000530981 FCGBPQ9Y6R7 5405 aaPredicted RBP4.16□□□□□ -1.74
SF3B2-210ENST00000530981 LOC100996750A0A140TA64 210 aa4.15□□□□□ -1.75
SF3B2-210ENST00000530981 KRTAP4-6Q9BYQ5 205 aa4.15□□□□□ -1.75
SF3B2-210ENST00000530981 A8MUN3 132 aa4.14□□□□□ -1.75
SF3B2-210ENST00000530981 DMAC1Q96GE9 116 aa4.14□□□□□ -1.75
SF3B2-210ENST00000530981 SNURFQ9Y675 71 aa4.14□□□□□ -1.75
SF3B2-210ENST00000530981 SPRR2GQ9BYE4 73 aa4.13□□□□□ -1.75
SF3B2-210ENST00000530981 MT1BP07438 61 aa4.12□□□□□ -1.75
SF3B2-210ENST00000530981 NDUFC1O43677 76 aa4.11□□□□□ -1.75
SF3B2-210ENST00000530981 KRTAP19-6Q3LI70 58 aa4.11□□□□□ -1.75
SF3B2-210ENST00000530981 SMIM20Q8N5G0 67 aa4.1□□□□□ -1.75
SF3B2-210ENST00000530981 KRTAP19-8Q3LI54 63 aa4.09□□□□□ -1.75
SF3B2-210ENST00000530981 SERP2Q8N6R1 65 aa4.09□□□□□ -1.75
SF3B2-210ENST00000530981 ADM2Q7Z4H4 148 aa4.07□□□□□ -1.76
SF3B2-210ENST00000530981 C20orf197Q8N268 126 aa4.07□□□□□ -1.76
SF3B2-210ENST00000530981 CYSTM1Q9H1C7 97 aa4.07□□□□□ -1.76
SF3B2-210ENST00000530981 H0YAA0 97 aa4.06□□□□□ -1.76
SF3B2-210ENST00000530981 P0C880 135 aa4.06□□□□□ -1.76
SF3B2-210ENST00000530981 KRTAP9-1A8MXZ3 250 aaPredicted RBP4.05□□□□□ -1.76
SF3B2-210ENST00000530981 ACYP2P14621 99 aa4□□□□□ -1.77
SF3B2-210ENST00000530981 COX7CP15954 63 aa4□□□□□ -1.77
SF3B2-210ENST00000530981 Q5VV11 94 aa4□□□□□ -1.77
SF3B2-210ENST00000530981 CRIPTQ9P021 101 aa4□□□□□ -1.77
SF3B2-210ENST00000530981 SPANXA2-OT1Q8N9U9 137 aa3.99□□□□□ -1.77
SF3B2-210ENST00000530981 MACF1Q9UPN3 7388 aaKnown RBP3.98□□□□□ -1.77
SF3B2-210ENST00000530981 H7BZZ5 65 aa3.95□□□□□ -1.78
SF3B2-210ENST00000530981 KRTAP10-5P60370 271 aa3.95□□□□□ -1.78
SF3B2-210ENST00000530981 SYNE2Q8WXH0 6885 aaKnown RBP3.94□□□□□ -1.78
SF3B2-210ENST00000530981 KRTAP9-7A8MTY7 169 aa3.93□□□□□ -1.78
SF3B2-210ENST00000530981 CCDC179H3BU77 68 aa3.92□□□□□ -1.78
SF3B2-210ENST00000530981 A6NN06 94 aa3.91□□□□□ -1.78
SF3B2-210ENST00000530981 CHKB-CPT1BH3BT56 60 aa3.9□□□□□ -1.79
SF3B2-210ENST00000530981 M0QZ58 72 aa3.9□□□□□ -1.79
SF3B2-210ENST00000530981 COA5Q86WW8 74 aa3.9□□□□□ -1.79
SF3B2-210ENST00000530981 ANAPC13Q9BS18 74 aa3.9□□□□□ -1.79
SF3B2-210ENST00000530981 MT1XP80297 61 aa3.89□□□□□ -1.79
SF3B2-210ENST00000530981 R4GN34 69 aa3.89□□□□□ -1.79
SF3B2-210ENST00000530981 KRTAP13-4Q3LI77 160 aa3.88□□□□□ -1.79
SF3B2-210ENST00000530981 LINC01554Q52M75 96 aa3.85□□□□□ -1.79
SF3B2-210ENST00000530981 SPTSSBQ8NFR3 76 aa3.85□□□□□ -1.79
SF3B2-210ENST00000530981 KRTAP6-3Q3LI67 103 aa3.8□□□□□ -1.8
SF3B2-210ENST00000530981 PLAC4Q8WY50 150 aa3.8□□□□□ -1.8
SF3B2-210ENST00000530981 KRTAP4-8Q9BYQ9 185 aa3.8□□□□□ -1.8
SF3B2-210ENST00000530981 KMT2DO14686 5537 aa3.78□□□□□ -1.8
SF3B2-210ENST00000530981 SPATA8Q6RVD6 105 aa3.74□□□□□ -1.81
SF3B2-210ENST00000530981 KRTAP4-8A0A0G2JLE6 195 aa3.73□□□□□ -1.81
SF3B2-210ENST00000530981 KRTAP10-7P60409 375 aaPredicted RBP3.73□□□□□ -1.81
SF3B2-210ENST00000530981 KRTAP5-9P26371 169 aa3.71□□□□□ -1.82
SF3B2-210ENST00000530981 PRO2289Q9P1D8 64 aa3.71□□□□□ -1.82
SF3B2-210ENST00000530981 MUC12Q9UKN1 5478 aa3.69□□□□□ -1.82
SF3B2-210ENST00000530981 NEBP20929 6669 aa3.69□□□□□ -1.82
SF3B2-210ENST00000530981 A0A0D9SG42 100 aa3.69□□□□□ -1.82
SF3B2-210ENST00000530981 A0A1B0GU33 70 aa3.69□□□□□ -1.82
SF3B2-210ENST00000530981 KRTAP12-2P59991 146 aa3.69□□□□□ -1.82
SF3B2-210ENST00000530981 SERP1Q9Y6X1 66 aa3.68□□□□□ -1.82
SF3B2-210ENST00000530981 KRTAP10-12P60413 245 aa3.67□□□□□ -1.82
SF3B2-210ENST00000530981 ATP5EP56381 51 aaPredicted RBP3.66□□□□□ -1.82
SF3B2-210ENST00000530981 SEC61GP60059 68 aa3.66□□□□□ -1.82
SF3B2-210ENST00000530981 TMEM258P61165 79 aa3.66□□□□□ -1.82
SF3B2-210ENST00000530981 A8MU10 97 aa3.65□□□□□ -1.83
SF3B2-210ENST00000530981 KRTAP12-1P59990 96 aa3.65□□□□□ -1.83
SF3B2-210ENST00000530981 A0A1B0GU69 56 aa3.64□□□□□ -1.83
SF3B2-210ENST00000530981 KRTAP4-12Q9BQ66 201 aa3.63□□□□□ -1.83
SF3B2-210ENST00000530981 LCE3BQ5TA77 95 aa3.62□□□□□ -1.83
SF3B2-210ENST00000530981 KRTAP8-1Q8IUC2 63 aa3.61□□□□□ -1.83
SF3B2-210ENST00000530981 SPRR2FQ96RM1 72 aa3.61□□□□□ -1.83
SF3B2-210ENST00000530981 LINC01558Q9Y6Z2 57 aa3.61□□□□□ -1.83
SF3B2-210ENST00000530981 MDN1Q9NU22 5596 aa3.59□□□□□ -1.83
SF3B2-210ENST00000530981 SPINT4Q6UDR6 99 aa3.59□□□□□ -1.83
SF3B2-210ENST00000530981 CAMK2N1Q7Z7J9 78 aa3.58□□□□□ -1.84
SF3B2-210ENST00000530981 LCE1AQ5T7P2 110 aa3.54□□□□□ -1.84
SF3B2-210ENST00000530981 KRTAP9-9Q9BYP9 154 aa3.54□□□□□ -1.84
SF3B2-210ENST00000530981 KRTAP9-4Q9BYQ2 154 aa3.54□□□□□ -1.84
SF3B2-210ENST00000530981 SMIM26A0A096LP01 95 aa3.52□□□□□ -1.85
SF3B2-210ENST00000530981 SPRR2EP22531 72 aa3.51□□□□□ -1.85
SF3B2-210ENST00000530981 SPRR2BP35325 72 aa3.51□□□□□ -1.85
SF3B2-210ENST00000530981 SPRR2AP35326 72 aa3.51□□□□□ -1.85
SF3B2-210ENST00000530981 PRR15LQ9BU68 103 aa3.51□□□□□ -1.85
SF3B2-210ENST00000530981 C10orf95Q9H7T3 257 aa3.51□□□□□ -1.85
SF3B2-210ENST00000530981 PCP4P48539 62 aa3.5□□□□□ -1.85
SF3B2-210ENST00000530981 KRTAP19-7Q3SYF9 63 aa3.49□□□□□ -1.85
SF3B2-210ENST00000530981 PSPHP1O15172 72 aa3.46□□□□□ -1.86
SF3B2-210ENST00000530981 Q1T7F1 81 aa3.45□□□□□ -1.86
SF3B2-210ENST00000530981 SVIPQ8NHG7 77 aa3.45□□□□□ -1.86
SF3B2-210ENST00000530981 UQCR11O14957 56 aa3.44□□□□□ -1.86
SF3B2-210ENST00000530981 KRTAP20-1Q3LI63 56 aa3.44□□□□□ -1.86
SF3B2-210ENST00000530981 MT1EP04732 61 aa3.42□□□□□ -1.86
SF3B2-210ENST00000530981 KRTAP19-5Q3LI72 72 aa3.42□□□□□ -1.86
SF3B2-210ENST00000530981 MIR22HGQ0VDD5 57 aa3.4□□□□□ -1.87
SF3B2-210ENST00000530981 LCE1DQ5T752 114 aa3.4□□□□□ -1.87
SF3B2-210ENST00000530981 SPRR2DP22532 72 aa3.39□□□□□ -1.87
SF3B2-210ENST00000530981 LCE3AQ5TA76 89 aa3.39□□□□□ -1.87
SF3B2-210ENST00000530981 KRTAP2-3P0C7H8 128 aa3.38□□□□□ -1.87
SF3B2-210ENST00000530981 RPS28P62857 69 aaKnown RBP3.38□□□□□ -1.87
Retrieved 100 of 20,778 RNA–protein pairs in 80.6 ms