RNA–Protein interactions for RNA: ENST00000528873.2

GEN1-204, Transcript of GEN1, Holliday junction 5' flap endonuclease, humanhuman

TSL 5

Gene GEN1, Length 871 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GEN1-204ENST00000528873 HMCN2Q8NDA2 5059 aa0.52□□□□□ -2.33
GEN1-204ENST00000528873 SYNE2Q8WXH0 6885 aaKnown RBP0.52□□□□□ -2.33
GEN1-204ENST00000528873 MACF1Q9UPN3 7388 aaKnown RBP0.52□□□□□ -2.33
GEN1-204ENST00000528873 NEBP20929 6669 aa0.51□□□□□ -2.33
GEN1-204ENST00000528873 HSPG2P98160 4391 aa0.51□□□□□ -2.33
GEN1-204ENST00000528873 ANK3Q12955 4377 aaKnown RBP0.51□□□□□ -2.33
GEN1-204ENST00000528873 HUWE1Q7Z6Z7 4374 aaKnown RBP0.5□□□□□ -2.33
GEN1-204ENST00000528873 CRIP1P50238 77 aa0.5□□□□□ -2.33
GEN1-204ENST00000528873 SPINK6Q6UWN8 80 aa0.5□□□□□ -2.33
GEN1-204ENST00000528873 MYCBP2O75592 4640 aa0.5□□□□□ -2.33
GEN1-204ENST00000528873 K7EMI3 77 aa0.49□□□□□ -2.33
GEN1-204ENST00000528873 CCL22O00626 93 aa0.49□□□□□ -2.33
GEN1-204ENST00000528873 DEFB109BQ30KR1 87 aa0.49□□□□□ -2.33
GEN1-204ENST00000528873 WFDC13Q8IUB5 93 aa0.49□□□□□ -2.33
GEN1-204ENST00000528873 CDKN2A-AS1Q9UH64 79 aa0.49□□□□□ -2.33
GEN1-204ENST00000528873 DNAH3Q8TD57 4116 aa0.49□□□□□ -2.33
GEN1-204ENST00000528873 STARD9Q9P2P6 4700 aa0.49□□□□□ -2.33
GEN1-204ENST00000528873 FAT2Q9NYQ8 4349 aa0.48□□□□□ -2.33
GEN1-204ENST00000528873 ALMS1Q8TCU4 4167 aa0.48□□□□□ -2.33
GEN1-204ENST00000528873 UBL5Q9BZL1 73 aa0.48□□□□□ -2.33
GEN1-204ENST00000528873 KCNQ1DNQ9H478 68 aa0.48□□□□□ -2.33
GEN1-204ENST00000528873 DNAH6Q9C0G6 4158 aa0.48□□□□□ -2.33
GEN1-204ENST00000528873 DNAH9Q9NYC9 4486 aa0.48□□□□□ -2.33
GEN1-204ENST00000528873 KMT2DO14686 5537 aa0.47□□□□□ -2.33
GEN1-204ENST00000528873 DYNC1H1Q14204 4646 aaKnown RBP0.47□□□□□ -2.33
GEN1-204ENST00000528873 H0YAA0 97 aa0.47□□□□□ -2.33
GEN1-204ENST00000528873 KRTAP20-1Q3LI63 56 aa0.47□□□□□ -2.33
GEN1-204ENST00000528873 USH2AO75445 5202 aa0.47□□□□□ -2.33
GEN1-204ENST00000528873 LRP2P98164 4655 aa0.46□□□□□ -2.34
GEN1-204ENST00000528873 LINC00158P58513 81 aa0.46□□□□□ -2.34
GEN1-204ENST00000528873 PKHD1L1Q86WI1 4243 aa0.46□□□□□ -2.34
GEN1-204ENST00000528873 DNAH10Q8IVF4 4471 aa0.45□□□□□ -2.34
GEN1-204ENST00000528873 VPS13BQ7Z7G8 4022 aa0.45□□□□□ -2.34
GEN1-204ENST00000528873 DEFB131BA0A096LNP1 70 aa0.45□□□□□ -2.34
GEN1-204ENST00000528873 ETDCA0A1B0GVM5 59 aa0.45□□□□□ -2.34
GEN1-204ENST00000528873 FCER1GP30273 86 aa0.45□□□□□ -2.34
GEN1-204ENST00000528873 COX6B2Q6YFQ2 88 aa0.45□□□□□ -2.34
GEN1-204ENST00000528873 Q9Y3F1 56 aa0.45□□□□□ -2.34
GEN1-204ENST00000528873 SPINK4O60575 86 aa0.44□□□□□ -2.34
GEN1-204ENST00000528873 SPINK1P00995 79 aa0.44□□□□□ -2.34
GEN1-204ENST00000528873 PKD1P98161 4303 aa0.44□□□□□ -2.34
GEN1-204ENST00000528873 PLECQ15149 4684 aaKnown RBP0.44□□□□□ -2.34
GEN1-204ENST00000528873 APOBP04114 4563 aaKnown RBP0.44□□□□□ -2.34
GEN1-204ENST00000528873 LRP1Q07954 4544 aaKnown RBP0.43□□□□□ -2.34
GEN1-204ENST00000528873 SYNE1Q8NF91 8797 aaKnown RBP0.43□□□□□ -2.34
GEN1-204ENST00000528873 MUC12Q9UKN1 5478 aa0.42□□□□□ -2.34
GEN1-204ENST00000528873 MDN1Q9NU22 5596 aa0.42□□□□□ -2.34
GEN1-204ENST00000528873 VPS13DQ5THJ4 4388 aa0.42□□□□□ -2.34
GEN1-204ENST00000528873 DSTQ03001 7570 aaKnown RBP0.42□□□□□ -2.34
GEN1-204ENST00000528873 FAT3Q8TDW7 4589 aa0.42□□□□□ -2.34
GEN1-204ENST00000528873 DNAH2Q9P225 4427 aa0.42□□□□□ -2.34
GEN1-204ENST00000528873 M0R1W7 72 aa0.42□□□□□ -2.34
GEN1-204ENST00000528873 CD52P31358 61 aa0.42□□□□□ -2.34
GEN1-204ENST00000528873 FAT1Q14517 4588 aa0.42□□□□□ -2.34
GEN1-204ENST00000528873 LRP1BQ9NZR2 4599 aa0.41□□□□□ -2.34
GEN1-204ENST00000528873 DNAH11Q96DT5 4516 aa0.41□□□□□ -2.34
GEN1-204ENST00000528873 DNAH5Q8TE73 4624 aa0.41□□□□□ -2.34
GEN1-204ENST00000528873 DNAH17Q9UFH2 4485 aa0.41□□□□□ -2.34
GEN1-204ENST00000528873 TFF3Q07654 80 aa0.41□□□□□ -2.34
GEN1-204ENST00000528873 U3KQA8 63 aa0.41□□□□□ -2.34
GEN1-204ENST00000528873 TNXBP22105 4242 aa0.4□□□□□ -2.34
GEN1-204ENST00000528873 MRPL33O75394 65 aaKnown RBP0.4□□□□□ -2.35
GEN1-204ENST00000528873 DEFB130BP0DP73 79 aa0.4□□□□□ -2.35
GEN1-204ENST00000528873 DEFB130AP0DP74 79 aa0.4□□□□□ -2.35
GEN1-204ENST00000528873 KRTAP21-1Q3LI58 79 aa0.4□□□□□ -2.35
GEN1-204ENST00000528873 STATHP02808 62 aa0.39□□□□□ -2.35
GEN1-204ENST00000528873 PRM1P04553 51 aa0.39□□□□□ -2.35
GEN1-204ENST00000528873 DEFB114Q30KQ6 69 aa0.39□□□□□ -2.35
GEN1-204ENST00000528873 LYNX1G3V0Z9 82 aa0.38□□□□□ -2.35
GEN1-204ENST00000528873 IAPPP10997 89 aa0.38□□□□□ -2.35
GEN1-204ENST00000528873 IGIPA6NJ69 53 aa0.37□□□□□ -2.35
GEN1-204ENST00000528873 PHGR1C9JFL3 82 aa0.37□□□□□ -2.35
GEN1-204ENST00000528873 DEFB133Q30KQ1 61 aa0.37□□□□□ -2.35
GEN1-204ENST00000528873 NCBP2-AS2Q69YL0 99 aa0.37□□□□□ -2.35
GEN1-204ENST00000528873 LPAP08519 4548 aa0.36□□□□□ -2.35
GEN1-204ENST00000528873 NMES1Q9C002 83 aa0.36□□□□□ -2.35
GEN1-204ENST00000528873 MINOS1Q5TGZ0 78 aa0.35□□□□□ -2.35
GEN1-204ENST00000528873 DEFB108AA8MXU0 73 aa0.34□□□□□ -2.36
GEN1-204ENST00000528873 FLGP20930 4061 aaPredicted RBP0.33□□□□□ -2.36
GEN1-204ENST00000528873 DNAH8Q96JB1 4490 aa0.33□□□□□ -2.36
GEN1-204ENST00000528873 SMR3BP02814 79 aaPredicted RBP0.33□□□□□ -2.36
GEN1-204ENST00000528873 RPS27P42677 84 aaKnown RBP0.33□□□□□ -2.36
GEN1-204ENST00000528873 RPS27LQ71UM5 84 aaKnown RBP0.33□□□□□ -2.36
GEN1-204ENST00000528873 DEFB104AQ8WTQ1 72 aa0.33□□□□□ -2.36
GEN1-204ENST00000528873 MUC17Q685J3 4493 aa0.32□□□□□ -2.36
GEN1-204ENST00000528873 M0R2T5 61 aa0.32□□□□□ -2.36
GEN1-204ENST00000528873 MT1HL1P0DM35 61 aa0.32□□□□□ -2.36
GEN1-204ENST00000528873 DEFB135Q30KP9 77 aa0.32□□□□□ -2.36
GEN1-204ENST00000528873 KRTAP19-6Q3LI70 58 aa0.32□□□□□ -2.36
GEN1-204ENST00000528873 SPRR2EP22531 72 aa0.31□□□□□ -2.36
GEN1-204ENST00000528873 SPRR2BP35325 72 aa0.31□□□□□ -2.36
GEN1-204ENST00000528873 SPRR2AP35326 72 aa0.31□□□□□ -2.36
GEN1-204ENST00000528873 SERF2P84101 59 aa0.31□□□□□ -2.36
GEN1-204ENST00000528873 C6orf48Q9UBA6 75 aa0.31□□□□□ -2.36
GEN1-204ENST00000528873 SPRR2DP22532 72 aa0.3□□□□□ -2.36
GEN1-204ENST00000528873 MT1HP80294 61 aa0.3□□□□□ -2.36
GEN1-204ENST00000528873 S4R3F8 94 aa0.3□□□□□ -2.36
GEN1-204ENST00000528873 WT1-ASQ06250 92 aa0.29□□□□□ -2.36
GEN1-204ENST00000528873 LINC00308Q8TCZ7 52 aa0.29□□□□□ -2.36
GEN1-204ENST00000528873 MT4P47944 62 aa0.28□□□□□ -2.36
Retrieved 100 of 20,778 RNA–protein pairs in 49.3 ms