RNA–Protein interactions for RNA: ENST00000528216.5

PGAP2-231, Transcript of post-GPI attachment to proteins 2, human

TSL 1 (best)

Gene PGAP2, Length 1,815 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PGAP2-231	ENST00000528216	TNXB	P22105	4242 aa		5.45	□□□□□ -1.54
PGAP2-231	ENST00000528216	SEC61G	P60059	68 aa		5.45	□□□□□ -1.54
PGAP2-231	ENST00000528216	LCE2B	O14633	110 aa		5.44	□□□□□ -1.54
PGAP2-231	ENST00000528216	UBR4	Q5T4S7	5183 aa		5.43	□□□□□ -1.54
PGAP2-231	ENST00000528216	UQCR11	O14957	56 aa		5.43	□□□□□ -1.54
PGAP2-231	ENST00000528216	RPL37	P61927	97 aa	Known RBP	5.43	□□□□□ -1.54
PGAP2-231	ENST00000528216	PMAIP1	Q13794	54 aa		5.43	□□□□□ -1.54
PGAP2-231	ENST00000528216	COX6B2	Q6YFQ2	88 aa		5.43	□□□□□ -1.54
PGAP2-231	ENST00000528216	SPATA8	Q6RVD6	105 aa		5.41	□□□□□ -1.54
PGAP2-231	ENST00000528216		A8MU10	97 aa		5.37	□□□□□ -1.55
PGAP2-231	ENST00000528216	KRTAP3-1	Q9BYR8	98 aa		5.37	□□□□□ -1.55
PGAP2-231	ENST00000528216	MIR22HG	Q0VDD5	57 aa		5.37	□□□□□ -1.55
PGAP2-231	ENST00000528216	XP32	Q5T750	250 aa		5.37	□□□□□ -1.55
PGAP2-231	ENST00000528216		A6NN06	94 aa		5.35	□□□□□ -1.55
PGAP2-231	ENST00000528216	TPRXL	Q17RH7	258 aa		5.32	□□□□□ -1.56
PGAP2-231	ENST00000528216	KTN1-AS1	Q86SY8	53 aa		5.32	□□□□□ -1.56
PGAP2-231	ENST00000528216	HMCN2	Q8NDA2	5059 aa		5.28	□□□□□ -1.56
PGAP2-231	ENST00000528216		H3BS24	57 aa		5.27	□□□□□ -1.57
PGAP2-231	ENST00000528216		A0A1B0GU33	70 aa		5.25	□□□□□ -1.57
PGAP2-231	ENST00000528216	H1FX-AS1	Q4G0G2	97 aa		5.24	□□□□□ -1.57
PGAP2-231	ENST00000528216		S4R3F8	94 aa		5.22	□□□□□ -1.57
PGAP2-231	ENST00000528216	RBM12B-AS1	Q9P1G2	102 aa		5.19	□□□□□ -1.58
PGAP2-231	ENST00000528216	LPA	P08519	4548 aa		5.17	□□□□□ -1.58
PGAP2-231	ENST00000528216		H0YAA0	97 aa		5.17	□□□□□ -1.58
PGAP2-231	ENST00000528216	LRP2	P98164	4655 aa		5.15	□□□□□ -1.58
PGAP2-231	ENST00000528216	SEC61B	P60468	96 aa	Known RBP	5.15	□□□□□ -1.59
PGAP2-231	ENST00000528216		K7ERS5	55 aa		5.14	□□□□□ -1.59
PGAP2-231	ENST00000528216	LCE2A	Q5TA79	106 aa	Predicted RBP	5.13	□□□□□ -1.59
PGAP2-231	ENST00000528216	KRTAP10-6	P60371	365 aa	Predicted RBP	5.1	□□□□□ -1.59
PGAP2-231	ENST00000528216	CSAG1	Q6PB30	78 aa		5.09	□□□□□ -1.59
PGAP2-231	ENST00000528216	RNF213	Q63HN8	5207 aa		5.04	□□□□□ -1.6
PGAP2-231	ENST00000528216		M0QZ58	72 aa		5.01	□□□□□ -1.61
PGAP2-231	ENST00000528216	LCE2C	Q5TA81	110 aa		5	□□□□□ -1.61
PGAP2-231	ENST00000528216	ADM2	Q7Z4H4	148 aa		5	□□□□□ -1.61
PGAP2-231	ENST00000528216	MUC17	Q685J3	4493 aa		4.99	□□□□□ -1.61
PGAP2-231	ENST00000528216		A0A0A0MQY5	61 aa		4.97	□□□□□ -1.61
PGAP2-231	ENST00000528216		P0C880	135 aa		4.97	□□□□□ -1.61
PGAP2-231	ENST00000528216	PRAC1	Q96KF2	57 aa		4.97	□□□□□ -1.61
PGAP2-231	ENST00000528216	KRTAP13-4	Q3LI77	160 aa		4.95	□□□□□ -1.62
PGAP2-231	ENST00000528216	MUC2	Q02817	5179 aa		4.94	□□□□□ -1.62
PGAP2-231	ENST00000528216	ROMO1	P60602	79 aa		4.93	□□□□□ -1.62
PGAP2-231	ENST00000528216		A0A0D9SG42	100 aa		4.9	□□□□□ -1.63
PGAP2-231	ENST00000528216	LOR	P23490	312 aa	Predicted RBP	4.9	□□□□□ -1.63
PGAP2-231	ENST00000528216	KRTAP4-1	Q9BYQ7	146 aa		4.89	□□□□□ -1.63
PGAP2-231	ENST00000528216	LINC01554	Q52M75	96 aa		4.88	□□□□□ -1.63
PGAP2-231	ENST00000528216	KRTAP9-2	Q9BYQ4	174 aa		4.88	□□□□□ -1.63
PGAP2-231	ENST00000528216	KRTAP25-1	Q3LHN0	102 aa		4.88	□□□□□ -1.63
PGAP2-231	ENST00000528216	KRTAP9-6	A0A140TA67	174 aa		4.87	□□□□□ -1.63
PGAP2-231	ENST00000528216	KRTAP12-1	P59990	96 aa		4.83	□□□□□ -1.64
PGAP2-231	ENST00000528216	KRTAP19-2	Q3LHN2	52 aa		4.83	□□□□□ -1.64
PGAP2-231	ENST00000528216		R4GN34	69 aa		4.83	□□□□□ -1.64
PGAP2-231	ENST00000528216	KRTAP12-2	P59991	146 aa		4.81	□□□□□ -1.64
PGAP2-231	ENST00000528216	LOC100996750	A0A140TA64	210 aa		4.79	□□□□□ -1.64
PGAP2-231	ENST00000528216	SPINT4	Q6UDR6	99 aa		4.79	□□□□□ -1.64
PGAP2-231	ENST00000528216	KRTAP4-6	Q9BYQ5	205 aa		4.79	□□□□□ -1.64
PGAP2-231	ENST00000528216	FAT4	Q6V0I7	4981 aa		4.78	□□□□□ -1.64
PGAP2-231	ENST00000528216	CRIPT	Q9P021	101 aa		4.76	□□□□□ -1.65
PGAP2-231	ENST00000528216	MT1H	P80294	61 aa		4.64	□□□□□ -1.67
PGAP2-231	ENST00000528216		M0R2T5	61 aa		4.63	□□□□□ -1.67
PGAP2-231	ENST00000528216	FLG	P20930	4061 aa	Predicted RBP	4.61	□□□□□ -1.67
PGAP2-231	ENST00000528216	FSIP2	Q5CZC0	6907 aa		4.57	□□□□□ -1.68
PGAP2-231	ENST00000528216	CAMK2N1	Q7Z7J9	78 aa		4.56	□□□□□ -1.68
PGAP2-231	ENST00000528216	C10orf95	Q9H7T3	257 aa		4.56	□□□□□ -1.68
PGAP2-231	ENST00000528216	CRCT1	Q9UGL9	99 aa		4.54	□□□□□ -1.68
PGAP2-231	ENST00000528216	PP632	Q6XCG6	107 aa		4.53	□□□□□ -1.68
PGAP2-231	ENST00000528216	SPRR2G	Q9BYE4	73 aa		4.51	□□□□□ -1.69
PGAP2-231	ENST00000528216	KRTAP23-1	A1A580	65 aa		4.49	□□□□□ -1.69
PGAP2-231	ENST00000528216	PLAC4	Q8WY50	150 aa		4.44	□□□□□ -1.7
PGAP2-231	ENST00000528216	TNP1	P09430	55 aa		4.42	□□□□□ -1.7
PGAP2-231	ENST00000528216	KRTAP9-8	Q9BYQ0	159 aa		4.42	□□□□□ -1.7
PGAP2-231	ENST00000528216	KRTAP19-1	Q8IUB9	90 aa		4.4	□□□□□ -1.7
PGAP2-231	ENST00000528216	KRTAP4-8	Q9BYQ9	185 aa		4.39	□□□□□ -1.71
PGAP2-231	ENST00000528216	MT2A	P02795	61 aa		4.38	□□□□□ -1.71
PGAP2-231	ENST00000528216	KRTAP10-10	P60014	251 aa		4.37	□□□□□ -1.71
PGAP2-231	ENST00000528216	KRTAP15-1	Q3LI76	137 aa		4.37	□□□□□ -1.71
PGAP2-231	ENST00000528216	MT1F	P04733	61 aa		4.35	□□□□□ -1.71
PGAP2-231	ENST00000528216	KRTAP19-8	Q3LI54	63 aa		4.35	□□□□□ -1.71
PGAP2-231	ENST00000528216	KRTAP9-7	A8MTY7	169 aa		4.33	□□□□□ -1.72
PGAP2-231	ENST00000528216	KRTAP9-1	A8MXZ3	250 aa	Predicted RBP	4.3	□□□□□ -1.72
PGAP2-231	ENST00000528216	KRTAP9-3	Q9BYQ3	159 aa		4.27	□□□□□ -1.73
PGAP2-231	ENST00000528216	LCE3B	Q5TA77	95 aa		4.23	□□□□□ -1.73
PGAP2-231	ENST00000528216	USH2A	O75445	5202 aa		4.22	□□□□□ -1.73
PGAP2-231	ENST00000528216	MT1B	P07438	61 aa		4.2	□□□□□ -1.74
PGAP2-231	ENST00000528216	KRTAP4-12	Q9BQ66	201 aa		4.18	□□□□□ -1.74
PGAP2-231	ENST00000528216	PRO2289	Q9P1D8	64 aa		4.16	□□□□□ -1.74
PGAP2-231	ENST00000528216	NDUFAF8	A1L188	74 aa		4.14	□□□□□ -1.75
PGAP2-231	ENST00000528216	SSPO	A2VEC9	5147 aa		4.13	□□□□□ -1.75
PGAP2-231	ENST00000528216	KRTAP10-5	P60370	271 aa		4.13	□□□□□ -1.75
PGAP2-231	ENST00000528216	MT1X	P80297	61 aa		4.13	□□□□□ -1.75
PGAP2-231	ENST00000528216	LUZP6	Q538Z0	58 aa		4.12	□□□□□ -1.75
PGAP2-231	ENST00000528216	KRTAP8-1	Q8IUC2	63 aa		4.1	□□□□□ -1.75
PGAP2-231	ENST00000528216	LCE3A	Q5TA76	89 aa		4.09	□□□□□ -1.75
PGAP2-231	ENST00000528216	KRTAP9-9	Q9BYP9	154 aa		4.09	□□□□□ -1.76
PGAP2-231	ENST00000528216	KRTAP9-4	Q9BYQ2	154 aa		4.09	□□□□□ -1.76
PGAP2-231	ENST00000528216	SPRR5	A0A1B0GTR4	108 aa		4.08	□□□□□ -1.76
PGAP2-231	ENST00000528216	KRTAP10-12	P60413	245 aa		4.05	□□□□□ -1.76
PGAP2-231	ENST00000528216	SYNE2	Q8WXH0	6885 aa	Known RBP	4.04	□□□□□ -1.76
PGAP2-231	ENST00000528216	KRTAP4-8	A0A0G2JLE6	195 aa		4.04	□□□□□ -1.76
PGAP2-231	ENST00000528216	FCGBP	Q9Y6R7	5405 aa	Predicted RBP	4.03	□□□□□ -1.76
PGAP2-231	ENST00000528216	KRTAP19-6	Q3LI70	58 aa		4.01	□□□□□ -1.77

Retrieved 100 of 20,778 RNA–protein pairs in 12.6 ms