RNA–Protein interactions for RNA: ENST00000527715.5

CTSH-204, Transcript of cathepsin H, humanhuman

TSL 1 (best)

Gene CTSH, Length 2,138 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSH-204ENST00000527715 LRP1Q07954 4544 aaKnown RBP6.37□□□□□ -1.39
CTSH-204ENST00000527715 MYCBP2O75592 4640 aa6.37□□□□□ -1.39
CTSH-204ENST00000527715 A8MUU9 505 aa6.36□□□□□ -1.39
CTSH-204ENST00000527715 J3QL48 77 aa6.36□□□□□ -1.39
CTSH-204ENST00000527715 MT1HL1P0DM35 61 aa6.36□□□□□ -1.39
CTSH-204ENST00000527715 KRTAP10-8P60410 259 aa6.36□□□□□ -1.39
CTSH-204ENST00000527715 FAT3Q8TDW7 4589 aa6.36□□□□□ -1.39
CTSH-204ENST00000527715 PCLOQ9Y6V0 5065 aa6.34□□□□□ -1.39
CTSH-204ENST00000527715 H0YAA0 97 aa6.34□□□□□ -1.4
CTSH-204ENST00000527715 C9orf92A6NGG3 77 aa6.32□□□□□ -1.4
CTSH-204ENST00000527715 C20orf166-AS1Q96NR2 134 aa6.32□□□□□ -1.4
CTSH-204ENST00000527715 KRTAP3-1Q9BYR8 98 aa6.32□□□□□ -1.4
CTSH-204ENST00000527715 KRTAP25-1Q3LHN0 102 aa6.29□□□□□ -1.4
CTSH-204ENST00000527715 TNXBP22105 4242 aa6.27□□□□□ -1.41
CTSH-204ENST00000527715 A0A1B0GU33 70 aa6.25□□□□□ -1.41
CTSH-204ENST00000527715 DMBT1Q9UGM3 2413 aaPredicted RBP6.25□□□□□ -1.41
CTSH-204ENST00000527715 H1FX-AS1Q4G0G2 97 aa6.23□□□□□ -1.41
CTSH-204ENST00000527715 ROMO1P60602 79 aa6.2□□□□□ -1.42
CTSH-204ENST00000527715 COX6B2Q6YFQ2 88 aa6.17□□□□□ -1.42
CTSH-204ENST00000527715 K7ERS5 55 aa6.13□□□□□ -1.43
CTSH-204ENST00000527715 HERC1Q15751 4861 aa6.1□□□□□ -1.43
CTSH-204ENST00000527715 KRTAP3-3Q9BYR6 98 aa6.04□□□□□ -1.44
CTSH-204ENST00000527715 KRTAP10-6P60371 365 aaPredicted RBP6.03□□□□□ -1.44
CTSH-204ENST00000527715 SEC61BP60468 96 aaKnown RBP6.01□□□□□ -1.45
CTSH-204ENST00000527715 P0C880 135 aa6.01□□□□□ -1.45
CTSH-204ENST00000527715 RPL37P61927 97 aaKnown RBP6□□□□□ -1.45
CTSH-204ENST00000527715 CRIPTQ9P021 101 aa6□□□□□ -1.45
CTSH-204ENST00000527715 HMCN2Q8NDA2 5059 aa5.99□□□□□ -1.45
CTSH-204ENST00000527715 TPRXLQ17RH7 258 aa5.99□□□□□ -1.45
CTSH-204ENST00000527715 KRTAP13-4Q3LI77 160 aa5.98□□□□□ -1.45
CTSH-204ENST00000527715 KRTAP3-2Q9BYR7 98 aa5.98□□□□□ -1.45
CTSH-204ENST00000527715 S4R3F8 94 aa5.95□□□□□ -1.46
CTSH-204ENST00000527715 A0A0D9SG42 100 aa5.93□□□□□ -1.46
CTSH-204ENST00000527715 XP32Q5T750 250 aa5.93□□□□□ -1.46
CTSH-204ENST00000527715 LPAP08519 4548 aa5.93□□□□□ -1.46
CTSH-204ENST00000527715 LRP2P98164 4655 aa5.89□□□□□ -1.47
CTSH-204ENST00000527715 SPINT4Q6UDR6 99 aa5.84□□□□□ -1.47
CTSH-204ENST00000527715 KRTAP15-1Q3LI76 137 aa5.82□□□□□ -1.48
CTSH-204ENST00000527715 KRTAP12-2P59991 146 aa5.79□□□□□ -1.48
CTSH-204ENST00000527715 C10orf95Q9H7T3 257 aa5.78□□□□□ -1.48
CTSH-204ENST00000527715 LUZP6Q538Z0 58 aa5.78□□□□□ -1.48
CTSH-204ENST00000527715 KRTAP12-1P59990 96 aa5.75□□□□□ -1.49
CTSH-204ENST00000527715 UBR4Q5T4S7 5183 aa5.74□□□□□ -1.49
CTSH-204ENST00000527715 MUC17Q685J3 4493 aa5.72□□□□□ -1.49
CTSH-204ENST00000527715 NDUFAF8A1L188 74 aa5.72□□□□□ -1.49
CTSH-204ENST00000527715 M0QZ58 72 aa5.69□□□□□ -1.5
CTSH-204ENST00000527715 KRTAP4-1Q9BYQ7 146 aa5.69□□□□□ -1.5
CTSH-204ENST00000527715 RNF213Q63HN8 5207 aa5.64□□□□□ -1.51
CTSH-204ENST00000527715 MUC2Q02817 5179 aa5.61□□□□□ -1.51
CTSH-204ENST00000527715 R4GN34 69 aa5.51□□□□□ -1.53
CTSH-204ENST00000527715 KRTAP19-2Q3LHN2 52 aa5.5□□□□□ -1.53
CTSH-204ENST00000527715 LCE2CQ5TA81 110 aa5.46□□□□□ -1.54
CTSH-204ENST00000527715 LORP23490 312 aaPredicted RBP5.45□□□□□ -1.54
CTSH-204ENST00000527715 FAT4Q6V0I7 4981 aa5.45□□□□□ -1.54
CTSH-204ENST00000527715 CAMK2N1Q7Z7J9 78 aa5.41□□□□□ -1.54
CTSH-204ENST00000527715 PLAC4Q8WY50 150 aa5.41□□□□□ -1.54
CTSH-204ENST00000527715 MT1HP80294 61 aa5.38□□□□□ -1.55
CTSH-204ENST00000527715 LCE2AQ5TA79 106 aaPredicted RBP5.35□□□□□ -1.55
CTSH-204ENST00000527715 M0R2T5 61 aa5.33□□□□□ -1.56
CTSH-204ENST00000527715 PP632Q6XCG6 107 aa5.31□□□□□ -1.56
CTSH-204ENST00000527715 FLGP20930 4061 aaPredicted RBP5.29□□□□□ -1.56
CTSH-204ENST00000527715 LCE2DQ5TA82 110 aaPredicted RBP5.19□□□□□ -1.58
CTSH-204ENST00000527715 KRTAP9-8Q9BYQ0 159 aa5.13□□□□□ -1.59
CTSH-204ENST00000527715 KRTAP23-1A1A580 65 aa5.12□□□□□ -1.59
CTSH-204ENST00000527715 MT2AP02795 61 aa5.11□□□□□ -1.59
CTSH-204ENST00000527715 SPRR5A0A1B0GTR4 108 aa5.08□□□□□ -1.6
CTSH-204ENST00000527715 MT1FP04733 61 aa5.08□□□□□ -1.6
CTSH-204ENST00000527715 TNP1P09430 55 aa5.08□□□□□ -1.6
CTSH-204ENST00000527715 KRTAP10-10P60014 251 aa5.06□□□□□ -1.6
CTSH-204ENST00000527715 PRO2289Q9P1D8 64 aa5□□□□□ -1.61
CTSH-204ENST00000527715 KRTAP9-3Q9BYQ3 159 aa4.96□□□□□ -1.62
CTSH-204ENST00000527715 SPRR2GQ9BYE4 73 aa4.93□□□□□ -1.62
CTSH-204ENST00000527715 KRTAP9-2Q9BYQ4 174 aa4.93□□□□□ -1.62
CTSH-204ENST00000527715 KRTAP19-1Q8IUB9 90 aa4.91□□□□□ -1.62
CTSH-204ENST00000527715 LCE2BO14633 110 aa4.87□□□□□ -1.63
CTSH-204ENST00000527715 LCE3AQ5TA76 89 aa4.81□□□□□ -1.64
CTSH-204ENST00000527715 FSIP2Q5CZC0 6907 aa4.77□□□□□ -1.65
CTSH-204ENST00000527715 KRTAP19-8Q3LI54 63 aa4.77□□□□□ -1.65
CTSH-204ENST00000527715 USH2AO75445 5202 aa4.75□□□□□ -1.65
CTSH-204ENST00000527715 MT1BP07438 61 aa4.73□□□□□ -1.65
CTSH-204ENST00000527715 INE1O15225 51 aa4.71□□□□□ -1.66
CTSH-204ENST00000527715 CRCT1Q9UGL9 99 aa4.71□□□□□ -1.66
CTSH-204ENST00000527715 KRTAP8-1Q8IUC2 63 aa4.69□□□□□ -1.66
CTSH-204ENST00000527715 KRTAP9-6A0A140TA67 174 aa4.66□□□□□ -1.66
CTSH-204ENST00000527715 SSPOA2VEC9 5147 aa4.65□□□□□ -1.66
CTSH-204ENST00000527715 KRTAP10-5P60370 271 aa4.64□□□□□ -1.67
CTSH-204ENST00000527715 MT1XP80297 61 aa4.63□□□□□ -1.67
CTSH-204ENST00000527715 KRTAP19-6Q3LI70 58 aa4.63□□□□□ -1.67
CTSH-204ENST00000527715 KRTAP12-3P60328 96 aa4.56□□□□□ -1.68
CTSH-204ENST00000527715 KRTAP10-12P60413 245 aa4.56□□□□□ -1.68
CTSH-204ENST00000527715 KRTAP10-7P60409 375 aaPredicted RBP4.51□□□□□ -1.69
CTSH-204ENST00000527715 FCGBPQ9Y6R7 5405 aaPredicted RBP4.5□□□□□ -1.69
CTSH-204ENST00000527715 KRTAP9-1A8MXZ3 250 aaPredicted RBP4.37□□□□□ -1.71
CTSH-204ENST00000527715 KRTAP19-5Q3LI72 72 aa4.34□□□□□ -1.71
CTSH-204ENST00000527715 LCE3CQ5T5A8 94 aa4.31□□□□□ -1.72
CTSH-204ENST00000527715 MACF1Q9UPN3 7388 aaKnown RBP4.3□□□□□ -1.72
CTSH-204ENST00000527715 KRTAP4-8A0A0G2JLE6 195 aa4.23□□□□□ -1.73
CTSH-204ENST00000527715 KRTAP4-8Q9BYQ9 185 aa4.23□□□□□ -1.73
CTSH-204ENST00000527715 KRTAP9-7A8MTY7 169 aa4.22□□□□□ -1.73
CTSH-204ENST00000527715 KMT2DO14686 5537 aa4.22□□□□□ -1.73
Retrieved 100 of 20,778 RNA–protein pairs in 11.6 ms