RNA–Protein interactions for RNA: ENST00000527547.5

CDC27-204, Transcript of cell division cycle 27, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene CDC27, Length 2,579 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC27-204ENST00000527547 FAT4Q6V0I7 4981 aa4.56□□□□□ -1.68
CDC27-204ENST00000527547 CHKB-CPT1BH3BT56 60 aa4.56□□□□□ -1.68
CDC27-204ENST00000527547 LCA10Q71F78 164 aa4.54□□□□□ -1.68
CDC27-204ENST00000527547 KRTAP3-3Q9BYR6 98 aa4.54□□□□□ -1.68
CDC27-204ENST00000527547 KRTAP3-2Q9BYR7 98 aa4.54□□□□□ -1.68
CDC27-204ENST00000527547 RPS28P62857 69 aaKnown RBP4.52□□□□□ -1.69
CDC27-204ENST00000527547 S4R3F8 94 aa4.52□□□□□ -1.69
CDC27-204ENST00000527547 LCE2CQ5TA81 110 aa4.51□□□□□ -1.69
CDC27-204ENST00000527547 KRTAP9-8Q9BYQ0 159 aa4.5□□□□□ -1.69
CDC27-204ENST00000527547 FLGP20930 4061 aaPredicted RBP4.48□□□□□ -1.69
CDC27-204ENST00000527547 SMIM26A0A096LP01 95 aa4.45□□□□□ -1.7
CDC27-204ENST00000527547 MT1HP80294 61 aa4.42□□□□□ -1.7
CDC27-204ENST00000527547 SPTSSBQ8NFR3 76 aa4.42□□□□□ -1.7
CDC27-204ENST00000527547 CSAG1Q6PB30 78 aa4.41□□□□□ -1.7
CDC27-204ENST00000527547 PSPHP1O15172 72 aa4.38□□□□□ -1.71
CDC27-204ENST00000527547 Q1T7F1 81 aa4.38□□□□□ -1.71
CDC27-204ENST00000527547 M0R2T5 61 aa4.38□□□□□ -1.71
CDC27-204ENST00000527547 LINC01558Q9Y6Z2 57 aa4.38□□□□□ -1.71
CDC27-204ENST00000527547 PRR15LQ9BU68 103 aa4.37□□□□□ -1.71
CDC27-204ENST00000527547 A0A1B0GU69 56 aa4.35□□□□□ -1.71
CDC27-204ENST00000527547 ADM2Q7Z4H4 148 aa4.34□□□□□ -1.72
CDC27-204ENST00000527547 V9GYY9 64 aa4.33□□□□□ -1.72
CDC27-204ENST00000527547 P0C880 135 aa4.33□□□□□ -1.72
CDC27-204ENST00000527547 KRTAP10-6P60371 365 aaPredicted RBP4.32□□□□□ -1.72
CDC27-204ENST00000527547 KRTAP5-3Q6L8H2 238 aa4.32□□□□□ -1.72
CDC27-204ENST00000527547 SEC61GP60059 68 aa4.31□□□□□ -1.72
CDC27-204ENST00000527547 Q5VV11 94 aa4.31□□□□□ -1.72
CDC27-204ENST00000527547 LORP23490 312 aaPredicted RBP4.28□□□□□ -1.72
CDC27-204ENST00000527547 LCE2AQ5TA79 106 aaPredicted RBP4.28□□□□□ -1.72
CDC27-204ENST00000527547 H0YAA0 97 aa4.27□□□□□ -1.73
CDC27-204ENST00000527547 A0A1B0GU33 70 aa4.24□□□□□ -1.73
CDC27-204ENST00000527547 MT2AP02795 61 aa4.23□□□□□ -1.73
CDC27-204ENST00000527547 KRTAP13-4Q3LI77 160 aa4.23□□□□□ -1.73
CDC27-204ENST00000527547 SPATA8Q6RVD6 105 aa4.23□□□□□ -1.73
CDC27-204ENST00000527547 MT1FP04733 61 aa4.22□□□□□ -1.73
CDC27-204ENST00000527547 A6NED7 52 aa4.21□□□□□ -1.73
CDC27-204ENST00000527547 A8MU10 97 aa4.19□□□□□ -1.74
CDC27-204ENST00000527547 KRTAP10-10P60014 251 aa4.19□□□□□ -1.74
CDC27-204ENST00000527547 UQCR11O14957 56 aa4.19□□□□□ -1.74
CDC27-204ENST00000527547 M0QZ58 72 aa4.18□□□□□ -1.74
CDC27-204ENST00000527547 R4GN34 69 aa4.17□□□□□ -1.74
CDC27-204ENST00000527547 MIR22HGQ0VDD5 57 aa4.15□□□□□ -1.74
CDC27-204ENST00000527547 A0A0D9SG42 100 aa4.15□□□□□ -1.75
CDC27-204ENST00000527547 LINC01554Q52M75 96 aa4.14□□□□□ -1.75
CDC27-204ENST00000527547 BRK1Q8WUW1 75 aa4.13□□□□□ -1.75
CDC27-204ENST00000527547 KRTAP19-1Q8IUB9 90 aa4.11□□□□□ -1.75
CDC27-204ENST00000527547 CDC42SE1Q9NRR8 79 aa4.1□□□□□ -1.75
CDC27-204ENST00000527547 CRIPTQ9P021 101 aa4.09□□□□□ -1.75
CDC27-204ENST00000527547 KRTAP9-3Q9BYQ3 159 aa4.08□□□□□ -1.76
CDC27-204ENST00000527547 SPRR2GQ9BYE4 73 aa4.08□□□□□ -1.76
CDC27-204ENST00000527547 KRTAP12-2P59991 146 aa4.04□□□□□ -1.76
CDC27-204ENST00000527547 SPINT4Q6UDR6 99 aa4.04□□□□□ -1.76
CDC27-204ENST00000527547 KRTAP12-1P59990 96 aa4.03□□□□□ -1.76
CDC27-204ENST00000527547 LCE2BO14633 110 aa4.02□□□□□ -1.77
CDC27-204ENST00000527547 USH2AO75445 5202 aa3.98□□□□□ -1.77
CDC27-204ENST00000527547 MT1BP07438 61 aa3.97□□□□□ -1.77
CDC27-204ENST00000527547 KRTAP19-8Q3LI54 63 aa3.97□□□□□ -1.77
CDC27-204ENST00000527547 PRO0628Q9UI54 55 aa3.96□□□□□ -1.78
CDC27-204ENST00000527547 A6NN06 94 aa3.95□□□□□ -1.78
CDC27-204ENST00000527547 FSIP2Q5CZC0 6907 aa3.94□□□□□ -1.78
CDC27-204ENST00000527547 K7ERS5 55 aa3.93□□□□□ -1.78
CDC27-204ENST00000527547 PLAC4Q8WY50 150 aa3.93□□□□□ -1.78
CDC27-204ENST00000527547 CAMK2N1Q7Z7J9 78 aa3.9□□□□□ -1.78
CDC27-204ENST00000527547 PMAIP1Q13794 54 aa3.89□□□□□ -1.79
CDC27-204ENST00000527547 SSPOA2VEC9 5147 aa3.84□□□□□ -1.79
CDC27-204ENST00000527547 KRTAP4-7Q9BYR0 210 aa3.84□□□□□ -1.8
CDC27-204ENST00000527547 MT1XP80297 61 aa3.83□□□□□ -1.8
CDC27-204ENST00000527547 C10orf95Q9H7T3 257 aa3.83□□□□□ -1.8
CDC27-204ENST00000527547 HMCN1Q96RW7 5635 aa3.83□□□□□ -1.8
CDC27-204ENST00000527547 KRTAP4-8A0A0G2JLE6 195 aa3.82□□□□□ -1.8
CDC27-204ENST00000527547 KRTAP10-5P60370 271 aa3.82□□□□□ -1.8
CDC27-204ENST00000527547 KRTAP4-8Q9BYQ9 185 aa3.82□□□□□ -1.8
CDC27-204ENST00000527547 KRTAP9-2Q9BYQ4 174 aa3.81□□□□□ -1.8
CDC27-204ENST00000527547 SVIPQ8NHG7 77 aa3.8□□□□□ -1.8
CDC27-204ENST00000527547 ROMO1P60602 79 aa3.79□□□□□ -1.8
CDC27-204ENST00000527547 KRTAP19-6Q3LI70 58 aa3.73□□□□□ -1.81
CDC27-204ENST00000527547 PRO2289Q9P1D8 64 aa3.73□□□□□ -1.81
CDC27-204ENST00000527547 PRAC1Q96KF2 57 aa3.71□□□□□ -1.82
CDC27-204ENST00000527547 KRTAP10-7P60409 375 aaPredicted RBP3.7□□□□□ -1.82
CDC27-204ENST00000527547 FCGBPQ9Y6R7 5405 aaPredicted RBP3.69□□□□□ -1.82
CDC27-204ENST00000527547 KTN1-AS1Q86SY8 53 aa3.68□□□□□ -1.82
CDC27-204ENST00000527547 TNP1P09430 55 aa3.67□□□□□ -1.82
CDC27-204ENST00000527547 KMT2DO14686 5537 aa3.66□□□□□ -1.82
CDC27-204ENST00000527547 CRCT1Q9UGL9 99 aa3.65□□□□□ -1.83
CDC27-204ENST00000527547 KRTAP25-1Q3LHN0 102 aa3.64□□□□□ -1.83
CDC27-204ENST00000527547 KRTAP9-1A8MXZ3 250 aaPredicted RBP3.6□□□□□ -1.83
CDC27-204ENST00000527547 KRTAP10-12P60413 245 aa3.6□□□□□ -1.83
CDC27-204ENST00000527547 KRTAP9-6A0A140TA67 174 aa3.59□□□□□ -1.83
CDC27-204ENST00000527547 LCE3AQ5TA76 89 aa3.58□□□□□ -1.84
CDC27-204ENST00000527547 KRTAP4-2Q9BYR5 136 aa3.57□□□□□ -1.84
CDC27-204ENST00000527547 H3BS24 57 aa3.56□□□□□ -1.84
CDC27-204ENST00000527547 MACF1Q9UPN3 7388 aaKnown RBP3.52□□□□□ -1.85
CDC27-204ENST00000527547 PP632Q6XCG6 107 aa3.48□□□□□ -1.85
CDC27-204ENST00000527547 KRTAP23-1A1A580 65 aa3.48□□□□□ -1.85
CDC27-204ENST00000527547 LCE3BQ5TA77 95 aa3.47□□□□□ -1.85
CDC27-204ENST00000527547 SYNE2Q8WXH0 6885 aaKnown RBP3.46□□□□□ -1.86
CDC27-204ENST00000527547 KRTAP8-1Q8IUC2 63 aa3.46□□□□□ -1.86
CDC27-204ENST00000527547 KRTAP19-5Q3LI72 72 aa3.45□□□□□ -1.86
CDC27-204ENST00000527547 KRTAP4-9Q9BYQ8 210 aa3.44□□□□□ -1.86
CDC27-204ENST00000527547 KRTAP12-3P60328 96 aa3.42□□□□□ -1.86
Retrieved 100 of 20,778 RNA–protein pairs in 51.7 ms