RNA–Protein interactions for RNA: ENST00000527265.1

CLNS1A-208, Transcript of chloride nucleotide-sensitive channel 1A, humanhuman

TSL 2

Gene CLNS1A, Length 620 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLNS1A-208ENST00000527265 COX17Q14061 63 aa1.5□□□□□ -2.17
CLNS1A-208ENST00000527265 Q6ZRX8 168 aa1.5□□□□□ -2.17
CLNS1A-208ENST00000527265 SMIM11BQ8TCY0 68 aa1.5□□□□□ -2.17
CLNS1A-208ENST00000527265 DNAH3Q8TD57 4116 aa1.5□□□□□ -2.17
CLNS1A-208ENST00000527265 HMCN1Q96RW7 5635 aa1.5□□□□□ -2.17
CLNS1A-208ENST00000527265 H3BUA1 57 aa1.49□□□□□ -2.17
CLNS1A-208ENST00000527265 DEFB131AP59861 70 aa1.49□□□□□ -2.17
CLNS1A-208ENST00000527265 RPL37P61927 97 aaKnown RBP1.49□□□□□ -2.17
CLNS1A-208ENST00000527265 MUSTN1Q8IVN3 82 aa1.49□□□□□ -2.17
CLNS1A-208ENST00000527265 USMG5Q96IX5 58 aa1.49□□□□□ -2.17
CLNS1A-208ENST00000527265 LINC00846Q9NV44 126 aa1.49□□□□□ -2.17
CLNS1A-208ENST00000527265 DNAH10Q8IVF4 4471 aa1.49□□□□□ -2.17
CLNS1A-208ENST00000527265 FAT2Q9NYQ8 4349 aa1.49□□□□□ -2.17
CLNS1A-208ENST00000527265 IGIPA6NJ69 53 aa1.48□□□□□ -2.17
CLNS1A-208ENST00000527265 M0QY20 66 aa1.48□□□□□ -2.17
CLNS1A-208ENST00000527265 HTN1P15515 57 aa1.48□□□□□ -2.17
CLNS1A-208ENST00000527265 POLR2KP53803 58 aaKnown RBP1.48□□□□□ -2.17
CLNS1A-208ENST00000527265 MYCBP2O75592 4640 aa1.48□□□□□ -2.17
CLNS1A-208ENST00000527265 STARD9Q9P2P6 4700 aa1.47□□□□□ -2.17
CLNS1A-208ENST00000527265 PLECQ15149 4684 aaKnown RBP1.47□□□□□ -2.17
CLNS1A-208ENST00000527265 TMEM263Q8WUH6 116 aaKnown RBP1.47□□□□□ -2.17
CLNS1A-208ENST00000527265 SSPOA2VEC9 5147 aa1.46□□□□□ -2.18
CLNS1A-208ENST00000527265 DYNC1H1Q14204 4646 aaKnown RBP1.46□□□□□ -2.18
CLNS1A-208ENST00000527265 A8MTW9 85 aa1.46□□□□□ -2.18
CLNS1A-208ENST00000527265 H0YGX0 51 aa1.46□□□□□ -2.18
CLNS1A-208ENST00000527265 KRTAP12-3P60328 96 aa1.46□□□□□ -2.18
CLNS1A-208ENST00000527265 COX6A2Q02221 97 aa1.46□□□□□ -2.18
CLNS1A-208ENST00000527265 DEFB114Q30KQ6 69 aa1.46□□□□□ -2.18
CLNS1A-208ENST00000527265 DNAH11Q96DT5 4516 aa1.46□□□□□ -2.18
CLNS1A-208ENST00000527265 I3L3M4 83 aa1.45□□□□□ -2.18
CLNS1A-208ENST00000527265 KRTAP12-4P60329 112 aa1.45□□□□□ -2.18
CLNS1A-208ENST00000527265 Q6JHZ5 121 aa1.45□□□□□ -2.18
CLNS1A-208ENST00000527265 SPATA8Q6RVD6 105 aa1.45□□□□□ -2.18
CLNS1A-208ENST00000527265 PLAC8Q9NZF1 115 aa1.45□□□□□ -2.18
CLNS1A-208ENST00000527265 UBE2D4Q9Y2X8 147 aa1.45□□□□□ -2.18
CLNS1A-208ENST00000527265 APOBP04114 4563 aaKnown RBP1.44□□□□□ -2.18
CLNS1A-208ENST00000527265 SPINK7P58062 85 aa1.44□□□□□ -2.18
CLNS1A-208ENST00000527265 CLPSL2Q6UWE3 100 aa1.44□□□□□ -2.18
CLNS1A-208ENST00000527265 NOP10Q9NPE3 64 aaKnown RBP1.44□□□□□ -2.18
CLNS1A-208ENST00000527265 CDKN2A-AS1Q9UH64 79 aa1.44□□□□□ -2.18
CLNS1A-208ENST00000527265 K7EIL1 84 aa1.43□□□□□ -2.18
CLNS1A-208ENST00000527265 DEFB4AO15263 64 aa1.43□□□□□ -2.18
CLNS1A-208ENST00000527265 NDUFB1O75438 58 aa1.43□□□□□ -2.18
CLNS1A-208ENST00000527265 UBL5Q9BZL1 73 aa1.43□□□□□ -2.18
CLNS1A-208ENST00000527265 A0A096LPF7 62 aa1.42□□□□□ -2.18
CLNS1A-208ENST00000527265 H0Y9P7 68 aa1.42□□□□□ -2.18
CLNS1A-208ENST00000527265 NDUFA1O15239 70 aa1.42□□□□□ -2.18
CLNS1A-208ENST00000527265 DEFB130BP0DP73 79 aa1.42□□□□□ -2.18
CLNS1A-208ENST00000527265 DEFB130AP0DP74 79 aa1.42□□□□□ -2.18
CLNS1A-208ENST00000527265 HAMPP81172 84 aa1.42□□□□□ -2.18
CLNS1A-208ENST00000527265 LINC00308Q8TCZ7 52 aa1.42□□□□□ -2.18
CLNS1A-208ENST00000527265 LRP2P98164 4655 aa1.42□□□□□ -2.18
CLNS1A-208ENST00000527265 ALMS1Q8TCU4 4167 aa1.42□□□□□ -2.18
CLNS1A-208ENST00000527265 DEFB135Q30KP9 77 aa1.41□□□□□ -2.18
CLNS1A-208ENST00000527265 Q6ZSA8 131 aa1.41□□□□□ -2.18
CLNS1A-208ENST00000527265 TOMM7Q9P0U1 55 aa1.41□□□□□ -2.18
CLNS1A-208ENST00000527265 GPR98Q8WXG9 6306 aa1.4□□□□□ -2.18
CLNS1A-208ENST00000527265 NEBP20929 6669 aa1.4□□□□□ -2.18
CLNS1A-208ENST00000527265 HTN3P15516 51 aa1.4□□□□□ -2.19
CLNS1A-208ENST00000527265 KRTAP4-1Q9BYQ7 146 aa1.4□□□□□ -2.19
CLNS1A-208ENST00000527265 LINC00959A0A1B0GUT2 108 aa1.39□□□□□ -2.19
CLNS1A-208ENST00000527265 LINC00158P58513 81 aa1.39□□□□□ -2.19
CLNS1A-208ENST00000527265 PKD1P98161 4303 aa1.39□□□□□ -2.19
CLNS1A-208ENST00000527265 FAT1Q14517 4588 aa1.39□□□□□ -2.19
CLNS1A-208ENST00000527265 DNAH2Q9P225 4427 aa1.38□□□□□ -2.19
CLNS1A-208ENST00000527265 ANGP03950 147 aaKnown RBP1.38□□□□□ -2.19
CLNS1A-208ENST00000527265 WFDC10BQ8IUB3 73 aa1.38□□□□□ -2.19
CLNS1A-208ENST00000527265 DNAH6Q9C0G6 4158 aa1.38□□□□□ -2.19
CLNS1A-208ENST00000527265 DNAH17Q9UFH2 4485 aa1.37□□□□□ -2.19
CLNS1A-208ENST00000527265 LELP1Q5T871 98 aa1.37□□□□□ -2.19
CLNS1A-208ENST00000527265 PRO0255Q9UI72 69 aa1.37□□□□□ -2.19
CLNS1A-208ENST00000527265 VPS13DQ5THJ4 4388 aa1.37□□□□□ -2.19
CLNS1A-208ENST00000527265 SYNE2Q8WXH0 6885 aaKnown RBP1.36□□□□□ -2.19
CLNS1A-208ENST00000527265 DNAH5Q8TE73 4624 aa1.36□□□□□ -2.19
CLNS1A-208ENST00000527265 TRBV7-4A0A0J9YYF1 115 aa1.36□□□□□ -2.19
CLNS1A-208ENST00000527265 ENHOQ6UWT2 76 aa1.36□□□□□ -2.19
CLNS1A-208ENST00000527265 UBE2DNLQ8IWF7 75 aa1.36□□□□□ -2.19
CLNS1A-208ENST00000527265 Q8IZM0 81 aa1.36□□□□□ -2.19
CLNS1A-208ENST00000527265 WFDC9Q8NEX5 89 aa1.36□□□□□ -2.19
CLNS1A-208ENST00000527265 C6orf48Q9UBA6 75 aa1.36□□□□□ -2.19
CLNS1A-208ENST00000527265 VPS13BQ7Z7G8 4022 aa1.36□□□□□ -2.19
CLNS1A-208ENST00000527265 LRP1BQ9NZR2 4599 aa1.35□□□□□ -2.19
CLNS1A-208ENST00000527265 A0A1B0GU69 56 aa1.35□□□□□ -2.19
CLNS1A-208ENST00000527265 SSBP3-AS1Q7Z2R9 100 aa1.35□□□□□ -2.19
CLNS1A-208ENST00000527265 SPART-AS1P0CW21 52 aa1.34□□□□□ -2.19
CLNS1A-208ENST00000527265 PKHD1L1Q86WI1 4243 aa1.34□□□□□ -2.2
CLNS1A-208ENST00000527265 COX7BP24311 80 aa1.33□□□□□ -2.2
CLNS1A-208ENST00000527265 NREPQ16612 68 aa1.33□□□□□ -2.2
CLNS1A-208ENST00000527265 KRTAP20-1Q3LI63 56 aa1.33□□□□□ -2.2
CLNS1A-208ENST00000527265 LRP1Q07954 4544 aaKnown RBP1.32□□□□□ -2.2
CLNS1A-208ENST00000527265 DEFB131BA0A096LNP1 70 aa1.32□□□□□ -2.2
CLNS1A-208ENST00000527265 ETDCA0A1B0GVM5 59 aa1.32□□□□□ -2.2
CLNS1A-208ENST00000527265 MACF1Q9UPN3 7388 aaKnown RBP1.32□□□□□ -2.2
CLNS1A-208ENST00000527265 LINC01556Q5JQF7 62 aa1.31□□□□□ -2.2
CLNS1A-208ENST00000527265 DEFB105AQ8NG35 78 aa1.31□□□□□ -2.2
CLNS1A-208ENST00000527265 KCNQ1DNQ9H478 68 aa1.31□□□□□ -2.2
CLNS1A-208ENST00000527265 USH2AO75445 5202 aa1.3□□□□□ -2.2
CLNS1A-208ENST00000527265 A0A096LNI7 61 aa1.3□□□□□ -2.2
CLNS1A-208ENST00000527265 H3BNG1 76 aa1.3□□□□□ -2.2
CLNS1A-208ENST00000527265 KRTAP10-4P60372 401 aaPredicted RBP1.3□□□□□ -2.2
Retrieved 100 of 20,778 RNA–protein pairs in 146 ms